Protein–RNA interactions for Protein: Q9UPQ4

TRIM35, Tripartite motif-containing protein 35, humanhuman

Predictions only

Length 493 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM35Q9UPQ4 KTN1-202ENST00000395308 4134 ntAPPRIS ALT2 TSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM35Q9UPQ4 KLRA1P-203ENST00000535939 2353 ntTSL 1 (best) BASIC6.43□□□□□ -1.38
TRIM35Q9UPQ4 BRIP1-202ENST00000577598 3969 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 RPL34-AS1-202ENST00000507248 3713 ntTSL 2 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 VSNL1-203ENST00000406397 2725 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 DLC1-209ENST00000511869 2451 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 LINC01206-204ENST00000482787 9580 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 ZNF525-202ENST00000474037 3890 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 IQCG-201ENST00000265239 2262 ntAPPRIS P1 TSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 CDC42BPA-204ENST00000366767 9320 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 OR8J2-201ENST00000641465 2883 ntAPPRIS P1 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 SP110-202ENST00000258382 2080 ntTSL 1 (best) BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 HYKK-206ENST00000569878 4097 ntAPPRIS P1 TSL 5 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 U8.1-201ENST00000362843 134 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 RNU6-873P-201ENST00000363833 107 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 RNU6-142P-201ENST00000384019 107 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 RNA5SP87-201ENST00000384155 118 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 RPL26P27-201ENST00000414397 437 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 AL135790.2-201ENST00000437701 267 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 AL353152.1-201ENST00000455973 470 ntTSL 5 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 AC139453.3-201ENST00000493276 369 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 AC091874.1-201ENST00000511402 339 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 AC138625.2-201ENST00000563968 551 ntTSL 3 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 MIR3934-201ENST00000579806 107 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 AC091953.3-201ENST00000623220 236 ntBASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 ZNF81-202ENST00000338637 7859 ntAPPRIS P1 TSL 3 BASIC6.42□□□□□ -1.38
TRIM35Q9UPQ4 SOCS5-201ENST00000306503 4771 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 ZNF732-201ENST00000419098 2193 ntAPPRIS P2 TSL 2 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 RYR3-201ENST00000389232 15552 ntAPPRIS ALT2 TSL 5 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 DCTN4-201ENST00000424236 4054 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 PTPRZ1-201ENST00000393386 8175 ntAPPRIS P3 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 Y_RNA.120-201ENST00000363304 110 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 Y_RNA.281-201ENST00000364774 94 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 MIR29B2-201ENST00000385055 81 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 SNORA40C-201ENST00000391285 128 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 AL512604.1-201ENST00000404812 257 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 U6atac.2-201ENST00000408644 118 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 RNU4-43P-201ENST00000410628 137 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 LINC00280-201ENST00000439525 448 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 AC010891.1-201ENST00000449963 448 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 AURKAPS2-201ENST00000454983 333 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 RNU6-436P-201ENST00000516171 114 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 HSPE1P4-201ENST00000550617 308 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 AC024592.1-202ENST00000590441 341 ntTSL 3 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 AC006380.1-201ENST00000603598 186 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 Mico1.1-201ENST00000611698 204 ntBASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 LRRC37A-203ENST00000496930 3860 ntTSL 2 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 MUC17-201ENST00000306151 14247 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 KMT5B-215ENST00000615954 4306 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 ST8SIA4-201ENST00000231461 6303 ntAPPRIS P1 TSL 1 (best) BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 PIK3C3-217ENST00000639914 2722 ntTSL 5 BASIC6.41□□□□□ -1.38
TRIM35Q9UPQ4 MTRR-202ENST00000440940 3215 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 ESRRG-206ENST00000366938 5274 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 IL1RL1-201ENST00000233954 2058 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 ECHDC1-222ENST00000531967 2585 ntAPPRIS ALT2 TSL 2 BASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 AL136164.4-201ENST00000625013 2135 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 ANK3-201ENST00000280772 16874 ntAPPRIS P3 TSL 1 (best) BASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 RNU6-942P-201ENST00000363002 107 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 Y_RNA.229-201ENST00000364347 113 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 SNORA72.4-201ENST00000384174 132 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 MIR450A2-201ENST00000385022 100 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 TRAV7-201ENST00000390429 337 ntAPPRIS P1 BASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 U3.30-201ENST00000391308 210 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 RNA5SP56-201ENST00000410277 118 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 MLLT10P1-201ENST00000418346 262 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 BX276092.4-201ENST00000452056 248 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 RN7SL517P-201ENST00000462240 305 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 RPS26P45-201ENST00000471748 340 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 RPL30P12-201ENST00000474666 353 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 MFAP5-205ENST00000535336 566 ntTSL 4 BASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 AC006349.1-201ENST00000555526 235 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 MIR4737-201ENST00000583979 81 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 AC091178.2-201ENST00000584401 117 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 MIR6730-201ENST00000622213 67 ntBASIC6.4□□□□□ -1.38
TRIM35Q9UPQ4 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM35Q9UPQ4 HEPHL1-201ENST00000315765 5345 ntAPPRIS P1 TSL 5 BASIC6.4□□□□□ -1.39
TRIM35Q9UPQ4 ZNF850-203ENST00000614887 7625 ntAPPRIS ALT2 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM35Q9UPQ4 NKRF-202ENST00000371527 3741 ntAPPRIS P1 TSL 1 (best) BASIC6.4□□□□□ -1.39
TRIM35Q9UPQ4 MTX3-204ENST00000617335 6155 ntTSL 2 BASIC6.4□□□□□ -1.39
TRIM35Q9UPQ4 FAM49B-212ENST00000519110 1902 ntAPPRIS P1 TSL 5 BASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-324P-201ENST00000363957 106 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-647P-201ENST00000364243 107 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-1107P-201ENST00000364817 104 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-166P-201ENST00000384371 107 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 MIRLET7F2-201ENST00000385277 83 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 NTRK3-205ENST00000394480 19984 ntAPPRIS P3 TSL 5 BASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 LINC00375-201ENST00000433074 601 ntTSL 5 BASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 AC112220.1-201ENST00000434628 355 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 RPL35AP21-201ENST00000437667 333 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 AC146507.2-201ENST00000460608 476 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 RPL23AP70-201ENST00000483361 460 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 RPL31P13-201ENST00000484151 370 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 PPP1R11P1-201ENST00000486095 376 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 RNU6-970P-201ENST00000516312 107 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 AC018442.3-201ENST00000523025 183 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 MIR4480-201ENST00000582492 71 ntBASIC6.39□□□□□ -1.39
TRIM35Q9UPQ4 AC120024.3-201ENST00000603167 156 ntBASIC6.39□□□□□ -1.39
Retrieved 100 of 98,524 protein–RNA pairs in 103.2 ms