Protein–RNA interactions for Protein: Q9NQI0

DDX4, Probable ATP-dependent RNA helicase DDX4, humanhuman

Known RBP Predictions only

Length 724 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DDX4Q9NQI0 AC003982.1-202ENST00000469928 248 ntBASIC3.27□□□□□ -1.89
DDX4Q9NQI0 AC090525.1-201ENST00000479116 478 ntBASIC3.27□□□□□ -1.89
DDX4Q9NQI0 AC079943.1-201ENST00000491909 466 ntTSL 3 BASIC3.27□□□□□ -1.89
DDX4Q9NQI0 RNU6-1256P-201ENST00000516539 103 ntBASIC3.27□□□□□ -1.89
DDX4Q9NQI0 RNU6-677P-201ENST00000516914 101 ntBASIC3.27□□□□□ -1.89
DDX4Q9NQI0 LINC00824-201ENST00000517583 805 ntTSL 5 BASIC3.27□□□□□ -1.89
DDX4Q9NQI0 AC109635.3-201ENST00000529536 185 ntBASIC3.27□□□□□ -1.89
DDX4Q9NQI0 AC104383.1-201ENST00000530297 370 ntBASIC3.27□□□□□ -1.89
DDX4Q9NQI0 AC007621.1-201ENST00000604544 437 ntBASIC3.27□□□□□ -1.89
DDX4Q9NQI0 LINC01515-217ENST00000620859 694 ntTSL 5 BASIC3.27□□□□□ -1.89
DDX4Q9NQI0 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.27□□□□□ -1.89
DDX4Q9NQI0 ANKRD26P2-201ENST00000445530 1710 ntBASIC3.27□□□□□ -1.89
DDX4Q9NQI0 AL589740.1-207ENST00000607823 1962 ntTSL 5 BASIC3.27□□□□□ -1.89
DDX4Q9NQI0 RNU6-859P-201ENST00000362728 107 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 SNORA14A-201ENST00000364773 135 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 RNU6-741P-201ENST00000383889 107 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 Y_RNA.409-201ENST00000383990 98 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 Y_RNA.450-201ENST00000384198 113 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 MIR196B-201ENST00000384852 84 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 RNU6ATAC16P-201ENST00000408591 138 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 RNU2-9P-201ENST00000410194 145 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 RNA5SP293-201ENST00000410527 113 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AL353193.1-201ENST00000421444 268 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC112220.1-201ENST00000434628 355 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 CBWD4P-201ENST00000445695 655 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC125238.1-201ENST00000448842 249 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 NRG3-AS1-201ENST00000448936 555 ntTSL 2 BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 LINC00395-202ENST00000451570 415 ntTSL 3 BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC083798.1-201ENST00000472671 131 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 RPL36AP51-201ENST00000487216 318 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC092185.1-201ENST00000491371 97 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC117522.3-201ENST00000507974 584 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AL117351.2-201ENST00000513571 157 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC105417.1-201ENST00000514691 285 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 RNA5SP291-201ENST00000517222 105 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 LINC01495-202ENST00000534135 343 ntTSL 2 BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 CLEC2D-214ENST00000543300 399 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC007619.1-201ENST00000544086 412 ntTSL 5 BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 CLEC2D-216ENST00000545918 288 ntTSL 1 (best) BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 DNAJC8P1-201ENST00000554535 372 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC025678.1-201ENST00000567861 338 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC130324.3-201ENST00000614165 542 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC034102.8-201ENST00000615146 484 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AC093648.1-201ENST00000623546 606 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 U6.114-201ENST00000636407 96 ntBASIC3.26□□□□□ -1.89
DDX4Q9NQI0 OR2L2-203ENST00000642011 4225 ntAPPRIS P1 BASIC3.26□□□□□ -1.89
DDX4Q9NQI0 AF165147.1-201ENST00000433310 6103 ntTSL 2 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 GPR183-201ENST00000376414 1700 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 PHF3-202ENST00000393387 6947 ntAPPRIS P1 TSL 1 (best) BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 TOPORSLP1-203ENST00000493279 2871 ntTSL 4 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 OR52E2-201ENST00000321522 978 ntAPPRIS P1 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 MIR148B-201ENST00000362252 99 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RNY4P14-201ENST00000363656 96 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RNU6-805P-201ENST00000365643 106 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RNU6-190P-201ENST00000384154 102 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 SNORA1.3-201ENST00000384676 136 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 Y_RNA.573-201ENST00000384763 105 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 LINC00301-202ENST00000412599 772 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 SDCBPP3-201ENST00000419629 891 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 LINC00368-201ENST00000422994 650 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 LINC02263-203ENST00000426240 515 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 CALM2P2-201ENST00000428512 440 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 SAR1AP4-201ENST00000429225 591 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 TAAR7P-201ENST00000436141 242 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RPL7P54-201ENST00000438336 674 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AL513043.1-201ENST00000439124 535 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RPS15AP9-201ENST00000439856 381 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AC104688.1-201ENST00000447158 419 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AL590664.1-201ENST00000448065 339 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AC007879.3-202ENST00000448786 823 ntTSL 1 (best) BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 FGF7P6-202ENST00000451282 293 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RPL31P60-201ENST00000478450 367 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AF213884.2-201ENST00000510417 903 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 SNORA40.12-201ENST00000516329 111 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RNU6-1178P-201ENST00000516674 107 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 HPRT1P3-201ENST00000539521 576 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AC234778.2-201ENST00000566241 354 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 SNORA59B-202ENST00000578183 701 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 DLGAP1-AS4-201ENST00000582054 757 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 LINC01900-203ENST00000585185 393 ntTSL 3 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RBM11P1-201ENST00000604951 799 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AC093788.1-201ENST00000609356 927 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AC090132.2-201ENST00000615881 347 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AC025034.2-201ENST00000623264 286 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 MIR7153-201ENST00000637758 57 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 MIR1321-201ENST00000637766 79 ntBASIC3.25□□□□□ -1.89
DDX4Q9NQI0 RASSF8-210ENST00000541490 5505 ntAPPRIS P1 TSL 5 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 EXOC6-203ENST00000371552 3564 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AC008505.1-204ENST00000637363 2714 ntTSL 5 BASIC3.25□□□□□ -1.89
DDX4Q9NQI0 AC093831.2-201ENST00000624393 3427 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 CC2D2B-210ENST00000636965 3247 ntTSL 5 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 MDM2-205ENST00000348801 798 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 RBBP8-202ENST00000360790 2962 ntTSL 1 (best) BASIC3.24□□□□□ -1.89
DDX4Q9NQI0 SNORA24.1-201ENST00000384401 135 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 MIR181A2-201ENST00000384863 110 ntBASIC3.24□□□□□ -1.89
DDX4Q9NQI0 MIR493-201ENST00000385254 89 ntBASIC3.24□□□□□ -1.89
Retrieved 100 of 98,524 protein–RNA pairs in 118.2 ms