Protein–RNA interactions for Protein: Q9NQG7

HPS4, Hermansky-Pudlak syndrome 4 protein, humanhuman

Predictions only

Length 708 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4Q9NQG7 CATSPERB-201ENST00000256343 3623 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
HPS4Q9NQG7 PSG8-202ENST00000401467 1686 ntTSL 5 BASIC2.59□□□□□ -2
HPS4Q9NQG7 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.59□□□□□ -2
HPS4Q9NQG7 ECT2-211ENST00000441497 2825 ntAPPRIS P2 TSL 1 (best) BASIC2.59□□□□□ -2
HPS4Q9NQG7 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.59□□□□□ -2
HPS4Q9NQG7 ATP8A2P3-201ENST00000426792 1536 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 LINC01592-202ENST00000518540 2367 ntTSL 2 BASIC2.58□□□□□ -2
HPS4Q9NQG7 TEX9-207ENST00000560582 2005 ntTSL 3 BASIC2.58□□□□□ -2
HPS4Q9NQG7 PRKACB-204ENST00000370685 4481 ntAPPRIS P4 TSL 1 (best) BASIC2.58□□□□□ -2
HPS4Q9NQG7 U8.2-201ENST00000363156 134 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 SNORD114-30-201ENST00000364448 72 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 RNU5E-6P-201ENST00000365574 115 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 SMIM11P1-201ENST00000369586 178 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC2.58□□□□□ -2
HPS4Q9NQG7 C6orf62-201ENST00000378102 741 ntTSL 5 BASIC2.58□□□□□ -2
HPS4Q9NQG7 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HPS4Q9NQG7 FCF1P10-201ENST00000407590 479 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 RNU2-49P-201ENST00000410666 184 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 Z98742.3-201ENST00000418637 326 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 SEPT2P1-201ENST00000419651 180 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 AL356583.2-201ENST00000426536 280 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 LINC01037-201ENST00000427337 424 ntTSL 5 BASIC2.58□□□□□ -2
HPS4Q9NQG7 GYPB-201ENST00000429670 239 ntTSL 1 (best) BASIC2.58□□□□□ -2
HPS4Q9NQG7 MTND4P25-201ENST00000441039 533 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 MTND1P30-201ENST00000441241 901 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 AL360091.3-201ENST00000442146 387 ntTSL 5 BASIC2.58□□□□□ -2
HPS4Q9NQG7 AC104389.3-201ENST00000445629 235 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 DPP10-AS2-201ENST00000446992 624 ntTSL 5 BASIC2.58□□□□□ -2
HPS4Q9NQG7 LINC01162-201ENST00000447262 447 ntTSL 5 BASIC2.58□□□□□ -2
HPS4Q9NQG7 HTR2A-AS1-202ENST00000452352 384 ntTSL 2 BASIC2.58□□□□□ -2
HPS4Q9NQG7 AL441989.1-201ENST00000454204 382 ntTSL 3 BASIC2.58□□□□□ -2
HPS4Q9NQG7 AC011998.3-201ENST00000457053 254 ntTSL 3 BASIC2.58□□□□□ -2
HPS4Q9NQG7 AC010273.2-201ENST00000479830 438 ntTSL 5 BASIC2.58□□□□□ -2
HPS4Q9NQG7 AC105252.1-201ENST00000503089 286 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 AP002075.1-201ENST00000505091 603 ntTSL 3 BASIC2.58□□□□□ -2
HPS4Q9NQG7 RNU2-10P-201ENST00000516375 211 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 HMGB1P41-201ENST00000520234 440 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 AC106038.2-201ENST00000520706 568 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 AC013417.1-201ENST00000549896 271 ntTSL 5 BASIC2.58□□□□□ -2
HPS4Q9NQG7 MIR5194-201ENST00000582634 120 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 AC104763.2-201ENST00000604179 382 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 AC092354.1-201ENST00000606057 376 ntBASIC2.58□□□□□ -2
HPS4Q9NQG7 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC2.58□□□□□ -2
HPS4Q9NQG7 GYPB-216ENST00000638448 363 ntAPPRIS P1 TSL 1 (best) BASIC2.58□□□□□ -2
HPS4Q9NQG7 PCM1-222ENST00000524226 5955 ntTSL 1 (best) BASIC2.58□□□□□ -2
HPS4Q9NQG7 SPAM1-206ENST00000460182 2154 ntAPPRIS ALT2 TSL 1 (best) BASIC2.57□□□□□ -2
HPS4Q9NQG7 DNAH7-201ENST00000312428 12394 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HPS4Q9NQG7 KPNA5-202ENST00000368564 11311 ntAPPRIS P1 TSL 1 (best) BASIC2.57□□□□□ -2
HPS4Q9NQG7 MIR6073-201ENST00000352083 89 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 RNU6-288P-201ENST00000363690 104 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 MIR524-201ENST00000385242 87 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 TRAJ40-201ENST00000390497 61 ntAPPRIS P1 BASIC2.57□□□□□ -2
HPS4Q9NQG7 RNU6-817P-201ENST00000391083 104 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 RPL26P27-201ENST00000414397 437 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 AC093157.2-201ENST00000414686 671 ntTSL 5 BASIC2.57□□□□□ -2
HPS4Q9NQG7 AC093106.2-201ENST00000428212 385 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 HMGB1P9-201ENST00000429856 646 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 AL445488.1-202ENST00000430623 545 ntTSL 3 BASIC2.57□□□□□ -2
HPS4Q9NQG7 HMGB3P12-201ENST00000438745 556 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 UBE2D3P4-201ENST00000441973 436 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 USP9YP12-201ENST00000450481 570 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 RPS27AP8-201ENST00000452665 445 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 AL355997.1-202ENST00000454361 610 ntTSL 3 BASIC2.57□□□□□ -2
HPS4Q9NQG7 AC027673.1-201ENST00000456245 405 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 MTND1P3-201ENST00000484956 952 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 RPL39P36-201ENST00000490784 156 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 AC139453.3-201ENST00000493276 369 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 RN7SL636P-201ENST00000497504 294 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 AC079340.1-201ENST00000504799 552 ntTSL 4 BASIC2.57□□□□□ -2
HPS4Q9NQG7 AC010486.3-201ENST00000511602 785 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 RNU6-1092P-201ENST00000516955 87 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 UTP23-205ENST00000520733 369 ntTSL 3 BASIC2.57□□□□□ -2
HPS4Q9NQG7 AC113145.1-201ENST00000522408 412 ntTSL 5 BASIC2.57□□□□□ -2
HPS4Q9NQG7 NACAP3-201ENST00000552100 481 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 Z99497.2-201ENST00000603634 310 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 AL359757.2-201ENST00000624309 274 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 ANKRD20A17P-201ENST00000511745 1330 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 IL6ST-201ENST00000336909 8776 ntAPPRIS P1 TSL 2 BASIC2.57□□□□□ -2
HPS4Q9NQG7 AC110491.1-201ENST00000562191 2010 ntBASIC2.57□□□□□ -2
HPS4Q9NQG7 AC006020.1-201ENST00000420179 1854 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AASDH-207ENST00000513376 3241 ntTSL 1 (best) BASIC2.56□□□□□ -2
HPS4Q9NQG7 BCHE-201ENST00000264381 2454 ntAPPRIS P1 TSL 1 (best) BASIC2.56□□□□□ -2
HPS4Q9NQG7 RNU4-1-201ENST00000363925 141 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 RNU1-52P-201ENST00000384190 164 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 RNU6-750P-201ENST00000390946 107 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AL359511.1-201ENST00000402970 211 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 RPS12P24-201ENST00000412619 387 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC002456.1-203ENST00000412669 449 ntTSL 3 BASIC2.56□□□□□ -2
HPS4Q9NQG7 AC009299.3-201ENST00000421122 1072 ntTSL 3 BASIC2.56□□□□□ -2
HPS4Q9NQG7 AC035139.1-201ENST00000423256 273 ntTSL 3 BASIC2.56□□□□□ -2
HPS4Q9NQG7 AC026355.1-201ENST00000423466 587 ntTSL 5 BASIC2.56□□□□□ -2
HPS4Q9NQG7 MED14P1-201ENST00000430517 648 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC098831.1-201ENST00000440661 216 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.56□□□□□ -2
HPS4Q9NQG7 MTATP6P26-201ENST00000445926 662 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 ANKRD62P1-PARP4P3-201ENST00000456726 1181 ntTSL 5 BASIC2.56□□□□□ -2
HPS4Q9NQG7 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.56□□□□□ -2
HPS4Q9NQG7 RNU6-953P-201ENST00000459154 107 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC109486.1-201ENST00000486833 374 ntBASIC2.56□□□□□ -2
HPS4Q9NQG7 AC010587.1-201ENST00000505809 469 ntBASIC2.56□□□□□ -2
Retrieved 100 of 98,524 protein–RNA pairs in 100.5 ms