Protein–RNA interactions for Protein: Q9H6U6

BCAS3, Breast carcinoma-amplified sequence 3, humanhuman

Predictions only

Length 928 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCAS3Q9H6U6 NFAT5-203ENST00000393742 13067 ntAPPRIS ALT1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RNU6-238P-201ENST00000363313 106 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RNU6-1059P-201ENST00000363752 98 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 SNORA9-201ENST00000384215 133 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 AL603908.1-201ENST00000406098 201 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 MIR548I3-201ENST00000408378 149 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RNU6ATAC23P-201ENST00000408448 123 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 MIR548I1-201ENST00000408810 149 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 LINC01201-201ENST00000412420 294 ntTSL 3 BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 AL591212.2-201ENST00000433923 257 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RPS24P13-201ENST00000442520 397 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 AL121871.1-201ENST00000443413 436 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 AL590399.6-201ENST00000446396 307 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RPL29P29-201ENST00000448725 423 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RNU7-187P-201ENST00000458985 68 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 AC106707.2-201ENST00000484182 374 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RPS26P15-201ENST00000488067 348 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 AC025244.2-201ENST00000509215 422 ntTSL 3 BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RNU2-53P-201ENST00000516257 147 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 RNU6-390P-201ENST00000516259 103 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 MIR5692A1-201ENST00000580523 69 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 ELOCP5-201ENST00000604924 333 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 HMGB1P24-202ENST00000615653 685 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 AKAP11-201ENST00000025301 9920 ntAPPRIS P1 TSL 1 (best) BASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 AC087190.4-201ENST00000574616 8334 ntBASIC4.23□□□□□ -1.73
BCAS3Q9H6U6 CNTRL-201ENST00000238341 7431 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 GABRG2-221ENST00000639683 3600 ntTSL 5 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 LRRC6-212ENST00000618342 1754 ntAPPRIS ALT1 TSL 5 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 IQGAP2-202ENST00000379730 5442 ntTSL 5 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 GEN1-201ENST00000317402 9854 ntAPPRIS P1 TSL 2 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 INPP4B-220ENST00000513000 8831 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 PRO1804-201ENST00000623780 2050 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 RTN4-209ENST00000405240 4061 ntTSL 1 (best) BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 Y_RNA.534-201ENST00000384599 112 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 Y_RNA.577-201ENST00000384794 101 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 MIR517A-201ENST00000385001 87 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 MS4A4E-202ENST00000398986 522 ntAPPRIS P1 TSL 5 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 RPL21P1-201ENST00000399532 476 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AL138885.1-201ENST00000405921 675 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 PPP3R1-202ENST00000409377 684 ntTSL 3 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 RNU6-712P-201ENST00000410558 100 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC096664.2-201ENST00000411843 406 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 MRPS18CP6-201ENST00000423587 223 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC087650.1-201ENST00000431445 468 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AL133396.1-201ENST00000432048 687 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 DAP3P1-201ENST00000441522 278 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC012070.1-201ENST00000442062 427 ntTSL 3 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC034195.1-202ENST00000451031 610 ntTSL 3 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AL353752.1-201ENST00000454946 260 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AL583843.1-201ENST00000456070 346 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC011005.2-201ENST00000487324 359 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 LINC02198-202ENST00000505371 526 ntTSL 5 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC139718.1-201ENST00000508010 300 ntTSL 5 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 SNORA31.22-201ENST00000517204 135 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC018904.1-201ENST00000560594 542 ntTSL 3 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC009145.1-201ENST00000563230 433 ntTSL 3 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 MIR15A-201ENST00000607334 83 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AL591516.1-201ENST00000611326 274 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 MIR4272-201ENST00000635924 64 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 POSTN-203ENST00000379747 3373 ntAPPRIS P3 TSL 1 (best) BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 GPR34-201ENST00000378138 1815 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 AC090971.4-201ENST00000560291 1800 ntBASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 TNNI3K-201ENST00000326637 3001 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 SLAIN2-205ENST00000512093 4219 ntTSL 5 BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 PCDH11X-206ENST00000373097 9146 ntAPPRIS ALT2 TSL 1 (best) BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 RAB3C-201ENST00000282878 8896 ntAPPRIS P1 TSL 1 (best) BASIC4.22□□□□□ -1.73
BCAS3Q9H6U6 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC4.21□□□□□ -1.73
BCAS3Q9H6U6 AL139811.1-201ENST00000424779 2299 ntBASIC4.21□□□□□ -1.73
BCAS3Q9H6U6 SCN1A-220ENST00000641603 12506 ntBASIC4.21□□□□□ -1.73
BCAS3Q9H6U6 DNAJC2-201ENST00000249270 1846 ntTSL 1 (best) BASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 DGKI-204ENST00000453654 12928 ntAPPRIS ALT2 TSL 1 (best) BASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 OR1E2-201ENST00000248384 972 ntAPPRIS P1 BASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 RNU6-263P-201ENST00000363811 107 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 Y_RNA.424-201ENST00000384063 103 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 RNU6-472P-201ENST00000384299 107 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 Y_RNA.518-201ENST00000384552 113 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 RNU6-607P-201ENST00000411283 108 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 RNU2-64P-201ENST00000411315 191 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 LIMS1-AS1-201ENST00000411710 477 ntTSL 3 BASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 PGBD4P6-201ENST00000421501 610 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 UBE2D3P2-201ENST00000424409 445 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 HSPD1P21-201ENST00000436541 245 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 OSTCP8-201ENST00000445117 448 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 AC073587.1-201ENST00000447093 876 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 FTH1P25-201ENST00000447665 469 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 AL360271.2-201ENST00000447710 161 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 RPL17P19-201ENST00000489069 552 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 TRBV12-2-201ENST00000489763 344 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 RNU6-388P-201ENST00000517012 105 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 RNU6-389P-201ENST00000517048 105 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 AP002833.1-201ENST00000530572 566 ntTSL 3 BASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 AC078889.1-201ENST00000536412 523 ntTSL 2 BASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 AC008011.1-201ENST00000545989 227 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 AC012229.1-201ENST00000558699 499 ntTSL 4 BASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 IGKV2OR2-8-201ENST00000558710 300 ntBASIC4.21□□□□□ -1.74
BCAS3Q9H6U6 AC087749.1-202ENST00000585020 566 ntTSL 2 BASIC4.21□□□□□ -1.74
Retrieved 100 of 98,524 protein–RNA pairs in 80.7 ms