Protein–RNA interactions for Protein: Q9C0I3

CCSER1, Serine-rich coiled-coil domain-containing protein 1, humanhuman

Predictions only

Length 900 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCSER1Q9C0I3 MYSM1-208ENST00000622766 6020 ntTSL 1 (best) BASIC2.55□□□□□ -2
CCSER1Q9C0I3 SAMD9L-201ENST00000318238 7134 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCSER1Q9C0I3 MT-ATP6-201ENST00000361899 681 ntAPPRIS P1 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 SNORD116-8-201ENST00000384365 95 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 Y_RNA.560-201ENST00000384689 102 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 RNU6-817P-201ENST00000391083 104 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 RNU4-53P-201ENST00000410828 140 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC007064.1-201ENST00000412238 351 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC104653.1-201ENST00000420579 578 ntTSL 2 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC104653.2-201ENST00000435407 416 ntTSL 3 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 RPL37P21-201ENST00000435890 276 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 TIMM9P1-201ENST00000436122 256 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC093639.1-201ENST00000441026 473 ntTSL 2 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 HMGN2P10-201ENST00000448085 265 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC073326.1-201ENST00000451832 557 ntTSL 3 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 RNU6-953P-201ENST00000459154 107 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 SNORD97-201ENST00000459187 142 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 RN7SL429P-201ENST00000479090 223 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 RN7SL489P-201ENST00000486185 223 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 RN7SL327P-201ENST00000488659 223 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 GZMAP1-201ENST00000503054 631 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 BTF3P12-201ENST00000519620 469 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 MTND2P38-201ENST00000522536 667 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC018410.2-201ENST00000540410 610 ntTSL 5 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC078778.1-201ENST00000547177 735 ntTSL 3 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 AKIRIN1P1-201ENST00000547384 544 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC130415.1-201ENST00000547569 1010 ntTSL 4 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC123905.1-201ENST00000552098 541 ntTSL 4 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC091544.4-201ENST00000555268 342 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC023824.2-201ENST00000566185 400 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.54□□□□□ -2
CCSER1Q9C0I3 SNORD53-201ENST00000579969 78 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 GALNT1-205ENST00000591081 1120 ntTSL 1 (best) BASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC007938.3-201ENST00000604965 623 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AL589743.7-201ENST00000612637 233 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 RN7SL853P-201ENST00000617250 223 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AC078883.4-201ENST00000623218 367 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AL136313.1-201ENST00000624804 202 ntBASIC2.54□□□□□ -2
CCSER1Q9C0I3 AGTPBP1-205ENST00000376083 4208 ntAPPRIS P1 TSL 1 (best) BASIC2.54□□□□□ -2
CCSER1Q9C0I3 PCDH11Y-203ENST00000362095 4220 ntAPPRIS ALT2 TSL 1 (best) BASIC2.53□□□□□ -2
CCSER1Q9C0I3 AL445523.1-201ENST00000451184 1362 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 RRAS2-211ENST00000537760 2034 ntTSL 2 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC080128.1-201ENST00000474389 1917 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 RNY3P9-201ENST00000384727 106 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 U8.14-201ENST00000390843 143 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 RNU6ATAC16P-201ENST00000408591 138 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 LINC01412-201ENST00000413525 362 ntTSL 2 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 MTCO3P30-201ENST00000426425 670 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AL365184.2-201ENST00000431139 435 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 COX6CP12-201ENST00000446748 202 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 LINC01474-202ENST00000449235 628 ntTSL 3 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC011753.1-201ENST00000451001 220 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 ZNF114P1-201ENST00000453500 292 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 PCDH9-AS4-201ENST00000456459 436 ntTSL 3 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 AL441985.1-201ENST00000457727 251 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 LINC01038-201ENST00000457858 428 ntTSL 3 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 CHRM3-AS2-203ENST00000458325 895 ntTSL 2 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 PLSCR5-AS1-201ENST00000473817 450 ntTSL 3 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 C4orf33-204ENST00000502887 1126 ntTSL 1 (best) BASIC2.53□□□□□ -2
CCSER1Q9C0I3 LINC02462-201ENST00000503009 430 ntTSL 5 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC026780.2-201ENST00000503489 730 ntTSL 5 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC023141.11-201ENST00000508864 202 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 IGLV3-17-201ENST00000519099 244 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC106038.2-201ENST00000520706 568 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC120042.2-201ENST00000521556 667 ntTSL 2 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 IGHVIII-5-1-201ENST00000523059 99 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC021739.1-201ENST00000559631 174 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC009063.1-201ENST00000563342 702 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC091489.2-201ENST00000566263 604 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AL356432.3-201ENST00000568952 465 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC019183.1-201ENST00000580524 505 ntTSL 3 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 MIR3945-201ENST00000581853 98 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 CLIC4P2-201ENST00000601934 717 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AL355472.4-201ENST00000610233 626 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 uc_338.14-201ENST00000613162 166 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 AC009831.4-201ENST00000620744 325 ntBASIC2.53□□□□□ -2
CCSER1Q9C0I3 COMMD6-213ENST00000626103 120 ntTSL 5 BASIC2.53□□□□□ -2
CCSER1Q9C0I3 SLC25A46-206ENST00000509432 1596 ntTSL 2 BASIC2.53□□□□□ -2.01
CCSER1Q9C0I3 N4BP2L2-205ENST00000446957 2071 ntTSL 5 BASIC2.53□□□□□ -2.01
CCSER1Q9C0I3 VIM-AS1-201ENST00000437232 1351 ntTSL 2 BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 SLC39A10-201ENST00000359634 5322 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 AC004944.1-201ENST00000517807 3059 ntBASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 OR51A7-202ENST00000641490 2186 ntAPPRIS P1 BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 IL2-201ENST00000226730 1029 ntAPPRIS P1 TSL 1 (best) BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 NACAP2-201ENST00000318548 624 ntBASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 RNU6-512P-201ENST00000364438 103 ntBASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 RNA5SP508-201ENST00000411327 119 ntBASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 USP9YP6-201ENST00000413550 854 ntBASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 AL158840.1-201ENST00000414132 523 ntTSL 3 BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 AF241725.1-201ENST00000416182 480 ntTSL 3 BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 RAC1P6-201ENST00000423911 575 ntBASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 AC006041.1-201ENST00000425322 328 ntTSL 3 BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 AC091133.1-201ENST00000435491 483 ntTSL 3 BASIC2.52□□□□□ -2.01
CCSER1Q9C0I3 NEFMP1-201ENST00000443423 1006 ntBASIC2.52□□□□□ -2.01
Retrieved 100 of 98,524 protein–RNA pairs in 93.4 ms