Protein–RNA interactions for Protein: Q99453

PHOX2B, Paired mesoderm homeobox protein 2B, humanhuman

Predictions only

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PHOX2BQ99453 VN1R85P-201ENST00000601587 426 ntBASIC5.35□□□□□ -1.55
PHOX2BQ99453 AC012468.1-201ENST00000604888 430 ntBASIC5.35□□□□□ -1.55
PHOX2BQ99453 AL008718.3-201ENST00000610217 321 ntBASIC5.35□□□□□ -1.55
PHOX2BQ99453 AL591926.8-201ENST00000616876 211 ntBASIC5.35□□□□□ -1.55
PHOX2BQ99453 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.35□□□□□ -1.55
PHOX2BQ99453 AL160287.1-202ENST00000638113 454 ntTSL 5 BASIC5.35□□□□□ -1.55
PHOX2BQ99453 DLD-214ENST00000639772 421 ntTSL 5 BASIC5.35□□□□□ -1.55
PHOX2BQ99453 SLC4A10-202ENST00000375514 5710 ntAPPRIS ALT1 TSL 2 BASIC5.35□□□□□ -1.55
PHOX2BQ99453 AGBL2-201ENST00000357610 3295 ntAPPRIS ALT2 TSL 5 BASIC5.35□□□□□ -1.55
PHOX2BQ99453 TNRC6B-201ENST00000301923 15958 ntAPPRIS P3 TSL 5 BASIC5.35□□□□□ -1.55
PHOX2BQ99453 AL136964.1-201ENST00000622038 2990 ntBASIC5.35□□□□□ -1.55
PHOX2BQ99453 MLH3-210ENST00000556257 4229 ntTSL 5 BASIC5.35□□□□□ -1.55
PHOX2BQ99453 KLHL28-201ENST00000355081 2177 ntTSL 1 (best) BASIC5.35□□□□□ -1.55
PHOX2BQ99453 SDR42E1-201ENST00000328945 11566 ntAPPRIS P1 TSL 1 (best) BASIC5.35□□□□□ -1.55
PHOX2BQ99453 ANKRD30BP1-201ENST00000451052 2186 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 DLEU2_6.3-201ENST00000340052 136 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 RNU6-275P-201ENST00000364910 107 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 U3.15-201ENST00000365398 212 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 MIR325-201ENST00000385260 98 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 RNA5SP475-201ENST00000410568 110 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 MIR3681HG-202ENST00000412606 578 ntTSL 5 BASIC5.34□□□□□ -1.55
PHOX2BQ99453 AC112498.1-201ENST00000444401 332 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 RPL26P9-201ENST00000457466 433 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 AC012081.1-201ENST00000462382 477 ntTSL 3 BASIC5.34□□□□□ -1.55
PHOX2BQ99453 AC097484.1-201ENST00000471148 389 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 TMEM132D-AS1-202ENST00000510001 293 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHOX2BQ99453 AC008869.1-201ENST00000510938 442 ntTSL 2 BASIC5.34□□□□□ -1.55
PHOX2BQ99453 Y_RNA.797-201ENST00000515977 94 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 RNU6-426P-201ENST00000516464 97 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 SCARNA16.4-201ENST00000516956 187 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 RNU6-1073P-201ENST00000517182 106 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 AC115990.1-201ENST00000526957 301 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 CYCSP29-201ENST00000533731 318 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 AC091544.7-201ENST00000554000 240 ntTSL 3 BASIC5.34□□□□□ -1.55
PHOX2BQ99453 AF001550.1-201ENST00000572747 573 ntTSL 4 BASIC5.34□□□□□ -1.55
PHOX2BQ99453 MIR4715-201ENST00000584117 79 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 AC007952.9-201ENST00000584365 191 ntTSL 3 BASIC5.34□□□□□ -1.55
PHOX2BQ99453 AL359881.1-201ENST00000602916 267 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 DLEU2_6.2-201ENST00000620994 136 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 BRCA1-203ENST00000357654 7094 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHOX2BQ99453 SDAD1P1-202ENST00000524156 2051 ntBASIC5.34□□□□□ -1.55
PHOX2BQ99453 ZNF493-203ENST00000392288 5023 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.55
PHOX2BQ99453 RBBP6-203ENST00000381039 3384 ntTSL 1 (best) BASIC5.34□□□□□ -1.55
PHOX2BQ99453 KCNJ1-206ENST00000440599 2539 ntAPPRIS P1 TSL 1 (best) BASIC5.34□□□□□ -1.56
PHOX2BQ99453 TTC6-201ENST00000267368 1681 ntTSL 5 BASIC5.34□□□□□ -1.56
PHOX2BQ99453 MOXD1-201ENST00000336749 2950 ntTSL 1 (best) BASIC5.34□□□□□ -1.56
PHOX2BQ99453 CACNB4-243ENST00000637217 8188 ntTSL 5 BASIC5.34□□□□□ -1.56
PHOX2BQ99453 DSE-204ENST00000452085 10586 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHOX2BQ99453 FAM135A-202ENST00000361499 5042 ntAPPRIS ALT1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHOX2BQ99453 CLCN5-202ENST00000376088 10108 ntTSL 2 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 ATF2-201ENST00000264110 4176 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PHOX2BQ99453 ZNF518B-201ENST00000326756 6894 ntAPPRIS P1 TSL 3 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 AC010332.2-201ENST00000613083 1904 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 NCOA3-203ENST00000372004 7939 ntAPPRIS ALT2 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHOX2BQ99453 MIR208A-201ENST00000362287 71 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 RNA5SP191-201ENST00000362585 102 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 RNU1-62P-201ENST00000362599 164 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 Y_RNA.101-201ENST00000363154 102 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 RNU6-103P-201ENST00000363686 107 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 MIR487A-201ENST00000385009 80 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 RNU6-257P-201ENST00000410238 98 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 GPS2P1-201ENST00000411761 986 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 RNF10P1-201ENST00000418589 369 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 AC074290.1-201ENST00000448883 135 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 IFT74-AS1-201ENST00000456198 405 ntTSL 2 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 RNU1-88P-201ENST00000459274 128 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 COX7A2-205ENST00000460985 357 ntTSL 2 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 RN7SL197P-201ENST00000466981 299 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 AC113192.5-201ENST00000528779 486 ntTSL 2 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 AC126615.2-201ENST00000553003 515 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 AC007224.1-201ENST00000564410 144 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 AC009163.5-201ENST00000575421 637 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 AC092636.1-201ENST00000608609 415 ntTSL 2 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 TEX41-243ENST00000614173 190 ntTSL 5 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 SHMT1-211ENST00000618902 378 ntTSL 5 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 AC092628.2-201ENST00000622492 339 ntBASIC5.33□□□□□ -1.56
PHOX2BQ99453 OR5A2-203ENST00000641673 9444 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 ALCAM-205ENST00000472644 4189 ntTSL 1 (best) BASIC5.33□□□□□ -1.56
PHOX2BQ99453 ZNF615-213ENST00000602063 4094 ntAPPRIS P3 TSL 5 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 FOXN2-201ENST00000340553 5408 ntAPPRIS P1 TSL 1 (best) BASIC5.33□□□□□ -1.56
PHOX2BQ99453 CDR1-201ENST00000370532 2467 ntAPPRIS P1 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 LRRN3-204ENST00000451085 3725 ntAPPRIS P1 TSL 2 BASIC5.33□□□□□ -1.56
PHOX2BQ99453 ZNF415-201ENST00000243643 2270 ntAPPRIS P3 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHOX2BQ99453 TESPA1-203ENST00000524622 4188 ntAPPRIS ALT2 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHOX2BQ99453 KBTBD3-201ENST00000526793 3751 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHOX2BQ99453 AC011900.1-201ENST00000446838 2999 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHOX2BQ99453 UBE4A-203ENST00000545354 2149 ntTSL 2 BASIC5.32□□□□□ -1.56
PHOX2BQ99453 PTPRD-213ENST00000537002 8224 ntTSL 1 (best) BASIC5.32□□□□□ -1.56
PHOX2BQ99453 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC5.32□□□□□ -1.56
PHOX2BQ99453 PTPRD-205ENST00000397611 8242 ntTSL 5 BASIC5.32□□□□□ -1.56
PHOX2BQ99453 RNU6-1280P-201ENST00000365211 107 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 MIR569-201ENST00000385228 96 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 MIR670-201ENST00000390142 98 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 AC002465.1-201ENST00000436097 349 ntTSL 2 BASIC5.32□□□□□ -1.56
PHOX2BQ99453 RPS15AP5-201ENST00000436276 388 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 RPL12P18-201ENST00000437175 325 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 HMGB1P37-201ENST00000439613 609 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 AL356535.1-201ENST00000440335 398 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 RPS23P2-201ENST00000463671 415 ntBASIC5.32□□□□□ -1.56
PHOX2BQ99453 RPS4XP13-201ENST00000483219 789 ntBASIC5.32□□□□□ -1.56
Retrieved 100 of 98,524 protein–RNA pairs in 101.6 ms