Protein–RNA interactions for Protein: Q96B54

ZNF428, Zinc finger protein 428, humanhuman

Predictions only

Length 188 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF428Q96B54 AC244205.2-202ENST00000635781 342 ntBASIC4.8□□□□□ -1.64
ZNF428Q96B54 AC099654.5-201ENST00000636479 350 ntBASIC4.8□□□□□ -1.64
ZNF428Q96B54 TRIM36-201ENST00000282369 4050 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF428Q96B54 MS4A14-202ENST00000395001 3401 ntTSL 5 BASIC4.8□□□□□ -1.64
ZNF428Q96B54 HTR2B-201ENST00000258400 2246 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF428Q96B54 CENPF-201ENST00000366955 10307 ntAPPRIS P1 TSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF428Q96B54 POLK-217ENST00000515295 1438 ntTSL 1 (best) BASIC4.8□□□□□ -1.64
ZNF428Q96B54 MAPK10-362ENST00000641864 4484 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 OFD1P6Y-202ENST00000451061 2724 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 ADAMTS9-AS1-207ENST00000594810 3609 ntTSL 4 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 C12orf4-201ENST00000261250 3826 ntAPPRIS P1 TSL 1 (best) BASIC4.79□□□□□ -1.64
ZNF428Q96B54 RNU1-18P-201ENST00000363062 164 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 RNA5SP139-201ENST00000364340 117 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 RNU6-658P-201ENST00000384606 106 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 AL356057.2-201ENST00000403318 432 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 RPS4XP7-201ENST00000406274 780 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 RAC1P3-201ENST00000416129 580 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 RPS15AP6-201ENST00000420703 385 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 LINC01402-201ENST00000422226 279 ntTSL 3 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 AL365400.1-201ENST00000431854 640 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 AL035634.1-201ENST00000446768 372 ntTSL 2 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 HMGN2P10-201ENST00000448085 265 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 MRPS31P2-201ENST00000451581 518 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 NIPA2P5-201ENST00000452282 464 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 RPS27AP10-201ENST00000496103 208 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 AC110768.1-201ENST00000509222 400 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 SNORA70.18-201ENST00000516696 98 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 ZNF436-AS1-205ENST00000518600 376 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 IGKV2-23-201ENST00000518729 323 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 AC022634.1-201ENST00000520765 532 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 AP004607.1-201ENST00000524456 203 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 H3F3AP1-201ENST00000559984 334 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 AC011825.2-201ENST00000583138 553 ntTSL 4 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 BRDTP1-201ENST00000605735 677 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 uc_338.5-201ENST00000611839 155 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 AC009248.2-201ENST00000619826 254 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 OR4C15-202ENST00000642128 951 ntAPPRIS P1 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 CDC27P3-201ENST00000635418 1910 ntBASIC4.79□□□□□ -1.64
ZNF428Q96B54 DOCK7-201ENST00000251157 7084 ntAPPRIS ALT2 TSL 5 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 HMGN5-201ENST00000358130 2126 ntAPPRIS P2 TSL 2 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 BTAF1-204ENST00000544642 6938 ntAPPRIS ALT1 TSL 5 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 CNGA1-203ENST00000420489 2746 ntAPPRIS P3 TSL 2 BASIC4.79□□□□□ -1.64
ZNF428Q96B54 NEDD4-201ENST00000338963 7019 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF428Q96B54 LINC01545-201ENST00000377879 521 ntTSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF428Q96B54 MIR490-201ENST00000384865 128 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 MTHFD2P2-201ENST00000407725 247 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 SNORA11.1-201ENST00000408133 129 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 U3.37-201ENST00000408528 213 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 RPS29P4-201ENST00000414733 161 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 SNAP23P1-201ENST00000433229 246 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 LINC01755-201ENST00000455010 453 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 AL109763.1-201ENST00000455391 461 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 ABCA17P-206ENST00000512848 467 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 RNU6-864P-201ENST00000516256 108 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 AC069120.1-201ENST00000521623 379 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 AC092746.1-201ENST00000542819 562 ntTSL 4 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 CYCSP39-201ENST00000565821 309 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 AC015845.1-201ENST00000579285 335 ntTSL 3 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 AC022601.1-201ENST00000596954 577 ntTSL 4 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 AC008739.3-201ENST00000603262 127 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 AL161756.2-201ENST00000604597 246 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 LARP7P1-201ENST00000605576 316 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 AL357078.3-201ENST00000607528 618 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 AC063943.3-201ENST00000615562 356 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 MIR3199-2-201ENST00000636243 86 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 U6.98-201ENST00000637157 84 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 AP000553.6-201ENST00000641242 118 ntBASIC4.78□□□□□ -1.64
ZNF428Q96B54 AKT3-201ENST00000263826 7081 ntAPPRIS P1 TSL 1 (best) BASIC4.78□□□□□ -1.64
ZNF428Q96B54 SEMA3D-201ENST00000284136 6265 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 DDX60L-201ENST00000260184 6754 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 CASP1-210ENST00000528974 1402 ntTSL 2 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 CCSER2-201ENST00000224756 7664 ntAPPRIS P1 TSL 5 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 MUC19-205ENST00000454784 24775 ntTSL 5 BASIC4.78□□□□□ -1.64
ZNF428Q96B54 NEGR1-201ENST00000306821 5577 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF428Q96B54 RNA5SP119-201ENST00000362715 117 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 SNORA75B-201ENST00000384053 137 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 RNU6-214P-201ENST00000384130 107 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 MIR449B-201ENST00000384995 97 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 MIR10A-201ENST00000385043 110 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC4.77□□□□□ -1.65
ZNF428Q96B54 RNU6-1009P-201ENST00000390996 107 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 AL122016.1-201ENST00000403365 367 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 RNA5SP31-201ENST00000411144 127 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 AC009411.1-202ENST00000412424 548 ntTSL 4 BASIC4.77□□□□□ -1.65
ZNF428Q96B54 AL592148.1-201ENST00000413568 445 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 ELF3-AS1-201ENST00000415582 500 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF428Q96B54 TTTY8-202ENST00000426035 518 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF428Q96B54 TAB3-AS1-201ENST00000428263 245 ntTSL 5 BASIC4.77□□□□□ -1.65
ZNF428Q96B54 AL355340.1-201ENST00000433085 344 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF428Q96B54 AL359672.1-201ENST00000442302 409 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 AC135371.1-201ENST00000446964 453 ntTSL 2 BASIC4.77□□□□□ -1.65
ZNF428Q96B54 PRSS3P4-201ENST00000453323 162 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 TTTY8B-202ENST00000455570 518 ntTSL 1 (best) BASIC4.77□□□□□ -1.65
ZNF428Q96B54 AP000889.2-201ENST00000532684 490 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 MAFTRR-204ENST00000568389 506 ntTSL 4 BASIC4.77□□□□□ -1.65
ZNF428Q96B54 AC012186.2-201ENST00000569353 321 ntTSL 3 BASIC4.77□□□□□ -1.65
ZNF428Q96B54 AC005730.3-201ENST00000583067 366 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 AC005261.5-201ENST00000596280 355 ntBASIC4.77□□□□□ -1.65
ZNF428Q96B54 SRGNP1-201ENST00000603392 451 ntBASIC4.77□□□□□ -1.65
Retrieved 100 of 98,524 protein–RNA pairs in 110.5 ms