Protein–RNA interactions for Protein: Q8IYX3

CCDC116, Coiled-coil domain-containing protein 116, humanhuman

Predictions only

Length 515 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC116Q8IYX3 ZNF33A-201ENST00000307441 6196 ntAPPRIS ALT2 TSL 4 BASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 ANKRD30BP1-201ENST00000451052 2186 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 SCARNA15-201ENST00000607520 4325 ntBASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 ARHGEF6-203ENST00000370622 4779 ntTSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 VPS13D-213ENST00000613099 16245 ntAPPRIS ALT1 TSL 1 (best) BASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 SCN1A-218ENST00000640036 8131 ntAPPRIS ALT1 TSL 5 BASIC4.89□□□□□ -1.63
CCDC116Q8IYX3 SCN1A-201ENST00000303395 8533 ntAPPRIS ALT1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 FAR2-203ENST00000547116 1787 ntTSL 2 BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 USP8-201ENST00000307179 4243 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 MS4A1-207ENST00000532073 2560 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 KCNJ16-204ENST00000585558 4014 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 RNA5SP183-201ENST00000362452 119 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 RNU6-873P-201ENST00000363833 107 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 RNU6-899P-201ENST00000363947 107 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 RNU6-1248P-201ENST00000391096 64 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 CACYBP-203ENST00000406752 243 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 LINC00969-211ENST00000438608 525 ntTSL 5 BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 AL161629.1-201ENST00000446201 457 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 ATP5LP3-201ENST00000514223 304 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 RNU4-60P-201ENST00000517239 135 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 AP003097.2-201ENST00000530126 178 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 CYCSP39-201ENST00000565821 309 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 MIR5571-201ENST00000577998 113 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 MIR3936-201ENST00000584304 110 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 MIR3658-201ENST00000636291 56 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 XKR4-201ENST00000327381 19880 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 NUP155-202ENST00000381843 4200 ntTSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 PSMA4-201ENST00000044462 4411 ntAPPRIS P1 TSL 1 (best) BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 HEATR5A-203ENST00000543095 7840 ntAPPRIS P1 TSL 5 BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 AC018529.3-201ENST00000624212 2254 ntBASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 ZSCAN26-204ENST00000614088 2321 ntTSL 3 BASIC4.88□□□□□ -1.63
CCDC116Q8IYX3 P2RY13-201ENST00000325602 2764 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 SRP72P2-201ENST00000344851 1979 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 TET2-202ENST00000305737 9233 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 ADGRG7-202ENST00000475887 2035 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 LINC02532-209ENST00000602934 2464 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 PROM1-220ENST00000540805 3908 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 LRRC19-201ENST00000380055 3609 ntAPPRIS P1 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 VPS41-203ENST00000395969 3181 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 PCDH15-203ENST00000373955 4230 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 KANSL1L-209ENST00000457374 2264 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 SNORA63.4-201ENST00000362763 126 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 RNU1-140P-201ENST00000365040 165 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 RNU1-43P-201ENST00000365052 165 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 RNU6-1056P-201ENST00000383996 107 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 RNU6-629P-201ENST00000384061 103 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 RNU6-381P-201ENST00000391259 108 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 C2orf73-203ENST00000405749 576 ntTSL 4 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC079355.1-201ENST00000421770 223 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC108075.1-201ENST00000424692 529 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 PTGES3P4-201ENST00000426243 356 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AL158835.2-201ENST00000430970 300 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AL442638.1-201ENST00000443359 237 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 Y_RNA.637-201ENST00000459424 114 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 RPS21P4-201ENST00000487122 248 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC108145.1-201ENST00000503770 153 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC107027.2-201ENST00000512197 115 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC022616.8-201ENST00000533569 253 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC018448.1-201ENST00000552843 316 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 LINC01584-202ENST00000563990 852 ntTSL 3 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AL356157.2-201ENST00000605122 111 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC004467.1-201ENST00000615678 330 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC091932.3-201ENST00000624223 323 ntBASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 DAOA-212ENST00000640578 378 ntAPPRIS ALT2 TSL 5 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 CKAP5-210ENST00000529230 7121 ntAPPRIS P1 TSL 5 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AC016687.3-202ENST00000505018 2404 ntTSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 PRLR-220ENST00000620785 11063 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 DCLK1-204ENST00000379893 4612 ntTSL 2 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 RBM39-201ENST00000253363 2488 ntAPPRIS P4 TSL 1 (best) BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 LINC01748-204ENST00000635048 5678 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 RALGAPA1-204ENST00000553892 6271 ntTSL 5 BASIC4.87□□□□□ -1.63
CCDC116Q8IYX3 AP001273.1-201ENST00000624493 3152 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 AC022893.2-201ENST00000564832 3296 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 ZNF681-201ENST00000402377 6497 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 ADAM5-202ENST00000399789 1942 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 SDHC-202ENST00000367975 13566 ntAPPRIS P1 TSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 RNU6-942P-201ENST00000363002 107 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 Y_RNA.420-201ENST00000384043 110 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 Y_RNA.542-201ENST00000384641 111 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 MIR1182-201ENST00000408363 97 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 MIR1290-201ENST00000408735 78 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 RNU6-1199P-201ENST00000411249 104 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 OR2AM1P-201ENST00000422137 422 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 AC009238.2-201ENST00000431026 355 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 KRTAP8-2P-201ENST00000440620 186 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 GPM6BP3-201ENST00000442797 145 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 SNRPGP7-201ENST00000469016 106 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 AC025741.1-201ENST00000506100 544 ntTSL 4 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 AC008852.1-201ENST00000510198 451 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 SNORA31.20-201ENST00000517111 133 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 AC009446.1-202ENST00000521131 473 ntTSL 3 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 ST3GAL3-233ENST00000531816 344 ntTSL 1 (best) BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 THEMIS-204ENST00000537166 3830 ntAPPRIS ALT2 TSL 2 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 LINC02442-202ENST00000540761 382 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 MED28P6-201ENST00000558776 231 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 AL031600.2-201ENST00000563223 307 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 GMFG-202ENST00000594700 397 ntTSL 2 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 MIR6826-201ENST00000617808 98 ntBASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 AC093495.1-217ENST00000627385 428 ntTSL 5 BASIC4.86□□□□□ -1.63
CCDC116Q8IYX3 PSMD5-AS1-215ENST00000640622 205 ntBASIC4.86□□□□□ -1.63
Retrieved 100 of 98,524 protein–RNA pairs in 10.9 ms