Protein–RNA interactions for Protein: Q6PIV2

FOXR1, Forkhead box protein R1, humanhuman

Predictions only

Length 292 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXR1Q6PIV2 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 AP001001.1-201ENST00000532422 826 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 AC008033.2-201ENST00000542626 177 ntBASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 ZNF84-212ENST00000542874 540 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 LINC02350-201ENST00000544419 480 ntTSL 3 BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 AL929601.2-201ENST00000549951 381 ntTSL 4 BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 AL157871.3-201ENST00000557231 293 ntBASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 PRG4-202ENST00000367483 4921 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 GABRA1-220ENST00000638159 4088 ntTSL 5 BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 AP000542.2-201ENST00000623199 6179 ntBASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 DMD-229ENST00000619831 13734 ntAPPRIS ALT2 TSL 5 BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 SENP7-202ENST00000348610 3272 ntAPPRIS ALT2 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 RASGRP1-209ENST00000559830 1910 ntTSL 1 (best) BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 ZC3H7A-202ENST00000396516 3845 ntAPPRIS P1 TSL 1 (best) BASIC4.95□□□□□ -1.62
FOXR1Q6PIV2 RAP1GDS1-205ENST00000408927 3681 ntAPPRIS P3 TSL 2 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 LINC02302-201ENST00000556405 2904 ntTSL 2 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 BCLAF1-207ENST00000527759 4373 ntAPPRIS ALT2 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 CSMD3-204ENST00000455883 12485 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 OR2L3-203ENST00000641649 2846 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 ZNF645-201ENST00000323684 1519 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 IREB2-201ENST00000258886 6354 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 GNAS-202ENST00000306090 477 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 RNU1-108P-201ENST00000362556 161 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 U3.3-201ENST00000362986 216 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 RNU4-84P-201ENST00000364200 139 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 RNA5SP90-201ENST00000364801 99 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 SNORA2.3-201ENST00000383920 135 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 Y_RNA.412-201ENST00000384001 104 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 SNORA20-201ENST00000384662 132 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 RNA5SP56-201ENST00000410277 118 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 SNORD12B-201ENST00000410433 91 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 RNU5A-5P-201ENST00000411054 116 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 LINC00279-201ENST00000413486 473 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 DDX39BP1-205ENST00000422507 192 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AL080313.1-201ENST00000434947 405 ntTSL 2 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 FAR2P1-203ENST00000440931 187 ntTSL 2 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AL137159.1-201ENST00000452808 512 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 snoU13.30-201ENST00000458951 104 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 SCARNA10-201ENST00000459255 330 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 RNU6-1095P-201ENST00000516148 108 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 Y_RNA.686-201ENST00000516548 134 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 RNA5SP392-201ENST00000516905 112 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 RNA5SP170-201ENST00000517150 101 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AC068880.3-201ENST00000519185 179 ntTSL 5 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AK6P2-201ENST00000549020 471 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AC215217.1-201ENST00000562162 347 ntTSL 3 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 MTND6P33-201ENST00000571794 183 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AC209154.1-201ENST00000582156 337 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 LINC01630-204ENST00000582689 539 ntTSL 4 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AC008745.1-201ENST00000604064 271 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AP000787.2-201ENST00000604432 568 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 AC005046.1-201ENST00000608515 625 ntBASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 ZNF207-203ENST00000394670 13781 ntAPPRIS ALT1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 DDHD2-202ENST00000517385 4113 ntTSL 2 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 SOS1-203ENST00000426016 8517 ntAPPRIS P2 TSL 2 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 OR5AU1-203ENST00000641697 7755 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 MLH3-212ENST00000556740 4491 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 OR5A1-202ENST00000641045 8612 ntAPPRIS P1 BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 FAM204A-203ENST00000369183 13889 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 ASAH2-201ENST00000329428 2184 ntTSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 CFTR-201ENST00000003084 6132 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 TMEM106B-201ENST00000396667 12539 ntAPPRIS P1 TSL 1 (best) BASIC4.94□□□□□ -1.62
FOXR1Q6PIV2 EYA4-202ENST00000355286 4317 ntAPPRIS ALT1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 GHR-202ENST00000357703 4316 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 SPAM1-205ENST00000439500 2220 ntAPPRIS ALT2 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 TOX-201ENST00000361421 4131 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 CACNB4-233ENST00000636773 4143 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 ATP8B4-211ENST00000559829 4894 ntAPPRIS P1 TSL 5 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 OR8J3-203ENST00000641913 3047 ntAPPRIS P1 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RNU6-227P-201ENST00000362865 103 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RNU6-626P-201ENST00000363354 107 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 Y_RNA.217-201ENST00000364214 105 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 SEL1L2-202ENST00000378072 1892 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 SNORA40-201ENST00000388090 126 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 KIF3A-203ENST00000403231 2181 ntTSL 2 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RPS16P5-201ENST00000406501 404 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 MIR1182-201ENST00000408363 97 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RNU2-43P-201ENST00000410306 190 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RNU2-50P-201ENST00000410494 143 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RNU6-1025P-201ENST00000410629 104 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 SNRPG-202ENST00000413456 398 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 AL358234.1-201ENST00000421132 273 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 AL133268.3-201ENST00000428903 577 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 AC091390.1-201ENST00000433904 331 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RPL34P20-201ENST00000442771 351 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 Y_RNA.641-201ENST00000459414 105 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RN7SL319P-201ENST00000480656 221 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 RN7SL441P-201ENST00000492388 296 ntBASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 GAPLINC-202ENST00000579007 643 ntTSL 3 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 AC005911.1-201ENST00000619883 456 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 ARHGEF12-202ENST00000397843 9660 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 ZNF254-202ENST00000357002 3967 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 PLAG1-201ENST00000316981 7322 ntAPPRIS P1 TSL 1 (best) BASIC4.93□□□□□ -1.62
FOXR1Q6PIV2 PLEKHG7-203ENST00000638590 3267 ntAPPRIS P1 TSL 2 BASIC4.92□□□□□ -1.62
FOXR1Q6PIV2 AC104793.1-201ENST00000508189 2840 ntTSL 2 BASIC4.92□□□□□ -1.62
FOXR1Q6PIV2 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.92□□□□□ -1.62
FOXR1Q6PIV2 ERICH3-AS1-202ENST00000612390 4874 ntTSL 1 (best) BASIC4.92□□□□□ -1.62
FOXR1Q6PIV2 AC010300.1-201ENST00000600671 5134 ntBASIC4.92□□□□□ -1.62
Retrieved 100 of 98,524 protein–RNA pairs in 115.5 ms