Protein–RNA interactions for Protein: P58418

CLRN1, Clarin-1, humanhuman

Predictions only

Length 232 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CLRN1P58418 ANP32BP2-201ENST00000454525 545 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 AC092798.1-201ENST00000458542 409 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 AC068781.1-201ENST00000488231 618 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 RPL31P61-201ENST00000496160 376 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 LINC02377-201ENST00000500169 450 ntTSL 3 BASIC3.56□□□□□ -1.84
CLRN1P58418 SNORD116.3-201ENST00000517176 78 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 RN7SKP289-201ENST00000517244 295 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 SAMD15-202ENST00000533095 412 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN1P58418 AP004242.1-201ENST00000533701 349 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 AC073655.2-202ENST00000547927 401 ntTSL 3 BASIC3.56□□□□□ -1.84
CLRN1P58418 MIR3690-201ENST00000580266 75 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 LINC02079-201ENST00000582518 294 ntTSL 2 BASIC3.56□□□□□ -1.84
CLRN1P58418 MIR3976-201ENST00000606807 139 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 AC005014.2-201ENST00000607795 599 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 MIR6868-201ENST00000611215 58 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 MIR6716-201ENST00000613413 80 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 AC099506.2-201ENST00000623074 221 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 CCT7-217ENST00000626868 249 ntTSL 5 BASIC3.56□□□□□ -1.84
CLRN1P58418 MIR6830-201ENST00000636015 70 ntBASIC3.56□□□□□ -1.84
CLRN1P58418 GPRC6A-203ENST00000530250 2310 ntTSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN1P58418 FAM126A-204ENST00000432176 13177 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN1P58418 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC3.56□□□□□ -1.84
CLRN1P58418 CD80-201ENST00000264246 2725 ntAPPRIS P1 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN1P58418 PTPN22-202ENST00000420377 2726 ntAPPRIS ALT2 TSL 1 (best) BASIC3.56□□□□□ -1.84
CLRN1P58418 UBE2D3-233ENST00000618836 3472 ntAPPRIS ALT1 TSL 5 BASIC3.56□□□□□ -1.84
CLRN1P58418 PLS3-203ENST00000420625 3150 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 TFPI-201ENST00000233156 3885 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN1P58418 ZNF638-203ENST00000409544 6821 ntAPPRIS P1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN1P58418 EVI5-208ENST00000540033 7436 ntAPPRIS ALT2 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN1P58418 MGA-211ENST00000570161 11859 ntAPPRIS P4 TSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 RNF38-210ENST00000611646 5185 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 RNU6-1317P-201ENST00000364582 104 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 RNU6-596P-201ENST00000365395 98 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 RNU6-827P-201ENST00000365553 106 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 RNU6-933P-201ENST00000384424 107 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 Y_RNA.527-201ENST00000384573 102 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 MORN2-203ENST00000409131 544 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 RNA5SP129-201ENST00000410276 118 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 Y_RNA.605-201ENST00000410577 105 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 RNU2-71P-201ENST00000411395 189 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 AC010731.2-201ENST00000415275 440 ntTSL 3 BASIC3.55□□□□□ -1.84
CLRN1P58418 AL691449.1-201ENST00000426570 421 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 TOMM20P4-201ENST00000427861 435 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 AL160411.1-201ENST00000429853 400 ntTSL 2 BASIC3.55□□□□□ -1.84
CLRN1P58418 AC092573.2-201ENST00000434546 243 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 AC011816.1-201ENST00000441346 546 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 RNU6-1037P-201ENST00000459571 107 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 RPL23AP45-201ENST00000476406 468 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 AL132838.2-201ENST00000492041 314 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 AC093523.1-201ENST00000503268 499 ntTSL 3 BASIC3.55□□□□□ -1.84
CLRN1P58418 AC091887.1-201ENST00000514002 439 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 AC023442.1-201ENST00000531247 422 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 OR5D17P-201ENST00000531492 978 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 AC092747.1-201ENST00000538920 351 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 CACNA1C-IT2-201ENST00000541871 589 ntTSL 2 BASIC3.55□□□□□ -1.84
CLRN1P58418 AC020891.1-201ENST00000558785 174 ntTSL 3 BASIC3.55□□□□□ -1.84
CLRN1P58418 CHEK2P2-203ENST00000566448 670 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 CPDP1-201ENST00000579660 283 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 RN7SL600P-201ENST00000581811 299 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 ZNF616-202ENST00000596290 568 ntTSL 4 BASIC3.55□□□□□ -1.84
CLRN1P58418 AL645944.1-201ENST00000603857 493 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 uc_338.32-201ENST00000615087 172 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 AL162373.1-201ENST00000620433 407 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 MIR6758-201ENST00000620653 63 ntBASIC3.55□□□□□ -1.84
CLRN1P58418 ADAT2-203ENST00000606514 6651 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN1P58418 LRRTM4-201ENST00000409088 3616 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN1P58418 MGA-202ENST00000545763 11413 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 MS4A14-208ENST00000531783 2910 ntAPPRIS ALT2 TSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 LGI1-210ENST00000629035 2251 ntTSL 5 BASIC3.55□□□□□ -1.84
CLRN1P58418 XRN1-202ENST00000392981 5383 ntAPPRIS ALT1 TSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN1P58418 WDR49-207ENST00000479765 2108 ntTSL 2 BASIC3.55□□□□□ -1.84
CLRN1P58418 TAB3-204ENST00000378932 3698 ntTSL 1 (best) BASIC3.55□□□□□ -1.84
CLRN1P58418 IDE-202ENST00000371581 4480 ntTSL 2 BASIC3.54□□□□□ -1.84
CLRN1P58418 ERBIN-203ENST00000380938 4701 ntTSL 2 BASIC3.54□□□□□ -1.84
CLRN1P58418 AGTR1-206ENST00000474935 1795 ntAPPRIS P1 TSL 3 BASIC3.54□□□□□ -1.84
CLRN1P58418 RPL26-201ENST00000293842 524 ntAPPRIS P1 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLRN1P58418 RPL9P7-201ENST00000330965 580 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 RNU6-50P-201ENST00000362356 103 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 Y_RNA.48-201ENST00000362710 103 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 RNA5SP130-201ENST00000364431 114 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 CD84-204ENST00000368048 1098 ntAPPRIS ALT2 TSL 1 (best) BASIC3.54□□□□□ -1.84
CLRN1P58418 SNORA70C-201ENST00000384538 135 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 RNU6-140P-201ENST00000384566 108 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AL513475.1-201ENST00000406602 315 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 U3.42-201ENST00000408746 214 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.54□□□□□ -1.84
CLRN1P58418 MRPS18CP6-201ENST00000423587 223 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 MTCYBP10-201ENST00000424905 650 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AC092047.1-201ENST00000424997 240 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 NDUFB4P6-201ENST00000436819 366 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AL513043.1-201ENST00000439124 535 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 HMGB1P37-201ENST00000439613 609 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AL078601.1-201ENST00000444542 271 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 RPL9P32-201ENST00000464118 620 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 RPS23P7-201ENST00000466210 444 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 RPL9P9-202ENST00000466501 579 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 SRP72-202ENST00000504757 745 ntTSL 2 BASIC3.54□□□□□ -1.84
CLRN1P58418 OR51K1P-201ENST00000510214 950 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 AC026726.1-201ENST00000512859 601 ntBASIC3.54□□□□□ -1.84
CLRN1P58418 ACA59.1-201ENST00000515966 143 ntBASIC3.54□□□□□ -1.84
Retrieved 100 of 98,524 protein–RNA pairs in 119.5 ms