Protein–RNA interactions for Protein: P55347

PKNOX1, Homeobox protein PKNOX1, humanhuman

Predictions only

Length 436 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PKNOX1P55347 OR5K1-202ENST00000642057 3466 ntAPPRIS P1 BASIC2.18□□□□□ -2.06
PKNOX1P55347 C6orf10-201ENST00000375007 2125 ntAPPRIS ALT2 TSL 5 BASIC2.17□□□□□ -2.06
PKNOX1P55347 RNU4-1-201ENST00000363925 141 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AKR1C1-201ENST00000380859 858 ntTSL 3 BASIC2.17□□□□□ -2.06
PKNOX1P55347 Y_RNA.534-201ENST00000384599 112 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 RNU4ATAC16P-201ENST00000408512 126 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 Y_RNA.608-201ENST00000410647 95 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 RNU4-72P-201ENST00000410754 173 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 Z92545.1-201ENST00000411782 234 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC107081.1-201ENST00000414975 361 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC017048.2-201ENST00000431455 822 ntTSL 3 BASIC2.17□□□□□ -2.06
PKNOX1P55347 RPL23AP83-201ENST00000434984 473 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AL590365.1-201ENST00000450788 243 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 MIR4435-2HG-213ENST00000451884 423 ntTSL 3 BASIC2.17□□□□□ -2.06
PKNOX1P55347 SNORD19.2-201ENST00000516978 73 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 RNU6-1183P-201ENST00000517054 60 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 MTCYBP20-201ENST00000524239 1129 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AP003181.2-201ENST00000528941 181 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.17□□□□□ -2.06
PKNOX1P55347 AL352955.1-201ENST00000555490 332 ntTSL 3 BASIC2.17□□□□□ -2.06
PKNOX1P55347 AC027176.1-201ENST00000560204 514 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC009127.3-201ENST00000570531 403 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC2.17□□□□□ -2.06
PKNOX1P55347 RPS15AP11-201ENST00000594193 385 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC104763.2-201ENST00000604179 382 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AL121917.1-203ENST00000605534 577 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 LINC02112-205ENST00000606744 236 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PKNOX1P55347 AC034229.4-201ENST00000607861 441 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 HMGB1P24-202ENST00000615653 685 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC131159.1-201ENST00000621854 213 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC007998.5-201ENST00000622938 237 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 AC012593.1-211ENST00000625996 799 ntTSL 5 BASIC2.17□□□□□ -2.06
PKNOX1P55347 MTND4P27-201ENST00000450813 1354 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 ADAM3A-203ENST00000461344 2157 ntBASIC2.17□□□□□ -2.06
PKNOX1P55347 EBAG9-210ENST00000620557 2186 ntAPPRIS P1 TSL 3 BASIC2.17□□□□□ -2.06
PKNOX1P55347 NEDD4-205ENST00000506154 6751 ntTSL 1 (best) BASIC2.17□□□□□ -2.06
PKNOX1P55347 AC103993.1-201ENST00000521500 1584 ntTSL 5 BASIC2.16□□□□□ -2.06
PKNOX1P55347 CCPG1-203ENST00000442196 3453 ntAPPRIS P1 TSL 2 BASIC2.16□□□□□ -2.06
PKNOX1P55347 MTND4P35-201ENST00000604257 1375 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 SNORA51.11-201ENST00000384442 131 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 RNU6-220P-201ENST00000390919 107 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 SNORA48.3-201ENST00000391081 134 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 MAGI2-AS2-201ENST00000411616 476 ntTSL 2 BASIC2.16□□□□□ -2.06
PKNOX1P55347 AC092809.3-201ENST00000415453 231 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 MTND1P23-201ENST00000416931 372 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AL138737.1-202ENST00000418834 876 ntTSL 3 BASIC2.16□□□□□ -2.06
PKNOX1P55347 RPS15AP12-201ENST00000419498 388 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC016710.1-201ENST00000421326 466 ntTSL 3 BASIC2.16□□□□□ -2.06
PKNOX1P55347 LINC00392-201ENST00000430033 557 ntTSL 3 BASIC2.16□□□□□ -2.06
PKNOX1P55347 LINC01724-201ENST00000430519 621 ntTSL 3 BASIC2.16□□□□□ -2.06
PKNOX1P55347 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.16□□□□□ -2.06
PKNOX1P55347 UBE2D3P1-201ENST00000436669 444 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 LINC00354-202ENST00000440860 376 ntTSL 2 BASIC2.16□□□□□ -2.06
PKNOX1P55347 AL161651.1-201ENST00000440882 223 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC128713.1-201ENST00000471495 306 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC005178.1-201ENST00000508392 440 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC103957.1-201ENST00000517681 503 ntTSL 3 BASIC2.16□□□□□ -2.06
PKNOX1P55347 AC106038.1-203ENST00000522132 362 ntTSL 2 BASIC2.16□□□□□ -2.06
PKNOX1P55347 AP003122.4-201ENST00000530980 758 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC020661.3-201ENST00000558101 414 ntTSL 3 BASIC2.16□□□□□ -2.06
PKNOX1P55347 AC007610.2-201ENST00000566770 666 ntTSL 3 BASIC2.16□□□□□ -2.06
PKNOX1P55347 AC106782.4-201ENST00000568264 210 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC012435.1-202ENST00000568772 240 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.16□□□□□ -2.06
PKNOX1P55347 MTATP6P24-201ENST00000576835 677 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 BNIP3P9-201ENST00000603714 553 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC138749.5-201ENST00000611461 208 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC011939.3-201ENST00000613686 466 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC130324.3-201ENST00000614165 542 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 AC116165.2-201ENST00000616705 206 ntBASIC2.16□□□□□ -2.06
PKNOX1P55347 CBLL1-201ENST00000222597 2003 ntAPPRIS ALT1 TSL 1 (best) BASIC2.15□□□□□ -2.06
PKNOX1P55347 SPAG11A-202ENST00000326625 445 ntTSL 5 BASIC2.15□□□□□ -2.07
PKNOX1P55347 EDDM3A-201ENST00000326842 927 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PKNOX1P55347 AL596028.1-201ENST00000326971 197 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 SNORA67.4-201ENST00000384688 142 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 STAP1-202ENST00000396225 1146 ntAPPRIS P1 TSL 1 (best) BASIC2.15□□□□□ -2.07
PKNOX1P55347 RNA5SP338-201ENST00000410495 85 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 AC009963.1-201ENST00000417265 157 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 AL109913.1-201ENST00000421173 514 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 AL591212.2-201ENST00000433923 257 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 AC023590.1-204ENST00000434023 431 ntTSL 5 BASIC2.15□□□□□ -2.07
PKNOX1P55347 AL121957.1-201ENST00000441532 338 ntTSL 2 BASIC2.15□□□□□ -2.07
PKNOX1P55347 BRK1P2-201ENST00000442875 223 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 IFNA11P-201ENST00000446352 526 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 RNU6-953P-201ENST00000459154 107 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 AC090255.1-201ENST00000495779 349 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 MTCYBP35-201ENST00000503630 1137 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 RNA5SP200-201ENST00000516360 103 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 RNA5SP337-201ENST00000517007 109 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 RNU4ATAC17P-201ENST00000517272 120 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC2.15□□□□□ -2.07
PKNOX1P55347 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.15□□□□□ -2.07
PKNOX1P55347 AL121821.2-201ENST00000556081 394 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 ROCK1P1-201ENST00000573767 549 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 AL031775.1-201ENST00000607014 887 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 AC022893.3-201ENST00000607665 437 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 MALAT1-206ENST00000612781 234 ntTSL 3 BASIC2.15□□□□□ -2.07
PKNOX1P55347 AC027807.2-201ENST00000616099 408 ntBASIC2.15□□□□□ -2.07
PKNOX1P55347 MCF2-204ENST00000414978 3813 ntAPPRIS ALT2 TSL 5 BASIC2.15□□□□□ -2.07
PKNOX1P55347 PLCZ1-209ENST00000539875 1398 ntTSL 1 (best) BASIC2.14□□□□□ -2.07
Retrieved 100 of 98,524 protein–RNA pairs in 91.7 ms