Protein–RNA interactions for Protein: P55285

CDH6, Cadherin-6, humanhuman

Predictions only

Length 790 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDH6P55285 RNU6-433P-201ENST00000363216 104 ntBASIC2.07□□□□□ -2.08
CDH6P55285 RNU6-188P-201ENST00000364207 107 ntBASIC2.07□□□□□ -2.08
CDH6P55285 RNA5SP126-201ENST00000365092 109 ntBASIC2.07□□□□□ -2.08
CDH6P55285 RNA5SP138-201ENST00000365098 114 ntBASIC2.07□□□□□ -2.08
CDH6P55285 RNU1-148P-201ENST00000384472 162 ntBASIC2.07□□□□□ -2.08
CDH6P55285 SNORA46.1-201ENST00000391069 153 ntBASIC2.07□□□□□ -2.08
CDH6P55285 CIR1P3-201ENST00000405137 479 ntBASIC2.07□□□□□ -2.08
CDH6P55285 RNU2-40P-201ENST00000410833 196 ntBASIC2.07□□□□□ -2.08
CDH6P55285 RPS24P7-201ENST00000416921 246 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AL445646.1-201ENST00000431784 216 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC025038.1-201ENST00000433249 336 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH6P55285 AL161935.3-201ENST00000433770 347 ntTSL 2 BASIC2.07□□□□□ -2.08
CDH6P55285 AL157937.1-201ENST00000435092 443 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH6P55285 LARP1BP3-201ENST00000437229 869 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC004383.1-201ENST00000438135 289 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AL139237.2-201ENST00000438454 493 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH6P55285 BRK1P2-201ENST00000442875 223 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC092001.1-201ENST00000453012 261 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC090515.1-201ENST00000465295 476 ntBASIC2.07□□□□□ -2.08
CDH6P55285 OARD1-209ENST00000471367 401 ntTSL 2 BASIC2.07□□□□□ -2.08
CDH6P55285 TRBV12-1-201ENST00000479785 344 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC2.07□□□□□ -2.08
CDH6P55285 AC091951.3-201ENST00000504093 246 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC010261.1-201ENST00000514411 457 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH6P55285 RNU6-581P-201ENST00000516214 105 ntBASIC2.07□□□□□ -2.08
CDH6P55285 RNU6-143P-201ENST00000516942 93 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC018541.1-202ENST00000518687 584 ntTSL 4 BASIC2.07□□□□□ -2.08
CDH6P55285 AC068992.1-202ENST00000519280 270 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH6P55285 AC021698.1-201ENST00000524858 716 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH6P55285 AP004247.1-201ENST00000531556 1289 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC092747.1-202ENST00000540595 380 ntTSL 5 BASIC2.07□□□□□ -2.08
CDH6P55285 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH6P55285 MIR5089-201ENST00000580047 84 ntBASIC2.07□□□□□ -2.08
CDH6P55285 MIR4648-201ENST00000580107 72 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC025165.5-201ENST00000602802 578 ntBASIC2.07□□□□□ -2.08
CDH6P55285 BCRP9-201ENST00000605312 388 ntBASIC2.07□□□□□ -2.08
CDH6P55285 AC244517.5-202ENST00000623741 500 ntTSL 3 BASIC2.07□□□□□ -2.08
CDH6P55285 MTND4P1-201ENST00000457501 1466 ntBASIC2.07□□□□□ -2.08
CDH6P55285 MIER3-204ENST00000381226 5210 ntAPPRIS ALT1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDH6P55285 SNORA16B-201ENST00000364674 135 ntBASIC2.06□□□□□ -2.08
CDH6P55285 RABGGTB-202ENST00000370826 512 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH6P55285 SNORA70B-201ENST00000384210 135 ntBASIC2.06□□□□□ -2.08
CDH6P55285 RNU6-925P-201ENST00000384629 104 ntBASIC2.06□□□□□ -2.08
CDH6P55285 RNU6-817P-201ENST00000391083 104 ntBASIC2.06□□□□□ -2.08
CDH6P55285 AC007179.1-201ENST00000415159 438 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH6P55285 AC244035.3-201ENST00000428399 271 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH6P55285 AL359878.2-201ENST00000435531 407 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH6P55285 UBE2FP3-201ENST00000436366 524 ntBASIC2.06□□□□□ -2.08
CDH6P55285 NEFMP1-201ENST00000443423 1006 ntBASIC2.06□□□□□ -2.08
CDH6P55285 LINC01628-201ENST00000444266 397 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH6P55285 AC055764.1-201ENST00000454526 473 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH6P55285 RPL39P36-201ENST00000490784 156 ntBASIC2.06□□□□□ -2.08
CDH6P55285 AC018437.1-201ENST00000492214 406 ntBASIC2.06□□□□□ -2.08
CDH6P55285 LIAS-206ENST00000513731 826 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH6P55285 AP003498.1-201ENST00000532530 347 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH6P55285 CBX3P7-201ENST00000532876 502 ntBASIC2.06□□□□□ -2.08
CDH6P55285 AP005671.1-201ENST00000581798 463 ntTSL 3 BASIC2.06□□□□□ -2.08
CDH6P55285 AL138963.2-201ENST00000605137 226 ntBASIC2.06□□□□□ -2.08
CDH6P55285 AC068276.1-201ENST00000605793 379 ntBASIC2.06□□□□□ -2.08
CDH6P55285 AC034238.1-213ENST00000611148 150 ntTSL 5 BASIC2.06□□□□□ -2.08
CDH6P55285 AC023490.1-201ENST00000614584 375 ntTSL 2 BASIC2.06□□□□□ -2.08
CDH6P55285 GPR171-203ENST00000617554 960 ntAPPRIS P1 BASIC2.06□□□□□ -2.08
CDH6P55285 MIR6134-201ENST00000617606 109 ntBASIC2.06□□□□□ -2.08
CDH6P55285 AC022306.3-201ENST00000619930 550 ntBASIC2.06□□□□□ -2.08
CDH6P55285 AC011718.1-201ENST00000622906 375 ntTSL 1 (best) BASIC2.06□□□□□ -2.08
CDH6P55285 hsa-mir-3158-1.1-201ENST00000637571 81 ntBASIC2.06□□□□□ -2.08
CDH6P55285 CDC27P3-201ENST00000635418 1910 ntBASIC2.06□□□□□ -2.08
CDH6P55285 PTPRQ-208ENST00000614701 8289 ntAPPRIS P1 TSL 5 BASIC2.06□□□□□ -2.08
CDH6P55285 TBC1D15-210ENST00000485960 2489 ntAPPRIS P1 TSL 1 (best) BASIC2.06□□□□□ -2.08
CDH6P55285 PARPBP-201ENST00000327680 3014 ntAPPRIS P1 TSL 2 BASIC2.05□□□□□ -2.08
CDH6P55285 Z75746.1-201ENST00000440243 2080 ntBASIC2.05□□□□□ -2.08
CDH6P55285 ZNF355P-201ENST00000427301 3216 ntBASIC2.05□□□□□ -2.08
CDH6P55285 RNU6-701P-201ENST00000384059 107 ntBASIC2.05□□□□□ -2.08
CDH6P55285 RNU6-14P-201ENST00000384630 106 ntBASIC2.05□□□□□ -2.08
CDH6P55285 RNU6ATAC38P-201ENST00000408119 126 ntBASIC2.05□□□□□ -2.08
CDH6P55285 MIR1302-8-201ENST00000408342 128 ntBASIC2.05□□□□□ -2.08
CDH6P55285 RNU2-63P-201ENST00000410792 194 ntBASIC2.05□□□□□ -2.08
CDH6P55285 RNA5SP270-201ENST00000411361 118 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AC097463.2-201ENST00000421074 142 ntBASIC2.05□□□□□ -2.08
CDH6P55285 BX005214.1-201ENST00000427327 476 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH6P55285 AL033539.1-201ENST00000427775 743 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH6P55285 TIMM9P1-201ENST00000436122 256 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AC002386.1-201ENST00000436714 398 ntTSL 2 BASIC2.05□□□□□ -2.08
CDH6P55285 RPL32P28-201ENST00000443577 397 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AL157373.1-201ENST00000456036 276 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH6P55285 RPL36AP48-201ENST00000485521 314 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AC103794.1-201ENST00000531763 197 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH6P55285 AC118273.2-201ENST00000532092 465 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AP000462.2-203ENST00000540545 715 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH6P55285 AL031716.1-201ENST00000569106 530 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH6P55285 AL513324.1-201ENST00000575236 632 ntTSL 5 BASIC2.05□□□□□ -2.08
CDH6P55285 TMF1P1-201ENST00000576058 373 ntBASIC2.05□□□□□ -2.08
CDH6P55285 MIR4782-201ENST00000577987 79 ntBASIC2.05□□□□□ -2.08
CDH6P55285 MTCO2P2-201ENST00000591258 225 ntBASIC2.05□□□□□ -2.08
CDH6P55285 BNIP3P9-201ENST00000603714 553 ntBASIC2.05□□□□□ -2.08
CDH6P55285 SNRPGP19-201ENST00000603826 189 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AL139022.2-201ENST00000606934 443 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AC079610.3-201ENST00000606960 147 ntTSL 3 BASIC2.05□□□□□ -2.08
CDH6P55285 AC091965.4-201ENST00000607691 587 ntBASIC2.05□□□□□ -2.08
CDH6P55285 AC009974.1-201ENST00000608881 455 ntBASIC2.05□□□□□ -2.08
Retrieved 100 of 98,524 protein–RNA pairs in 85.9 ms