Protein–RNA interactions for Protein: P40937

RFC5, Replication factor C subunit 5, humanhuman

Predictions only

Length 340 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RFC5P40937 OR4C16-201ENST00000623907 933 ntAPPRIS P1 BASIC5.29□□□□□ -1.56
RFC5P40937 ITGB1-205ENST00000423113 3729 ntAPPRIS ALT1 TSL 5 BASIC5.29□□□□□ -1.56
RFC5P40937 FAM35BP-202ENST00000497389 3337 ntBASIC5.29□□□□□ -1.56
RFC5P40937 ANK2-202ENST00000357077 14196 ntAPPRIS P3 TSL 1 (best) BASIC5.29□□□□□ -1.56
RFC5P40937 EVI2A-201ENST00000247270 1860 ntAPPRIS P3 TSL 2 BASIC5.28□□□□□ -1.56
RFC5P40937 MAP3K20-202ENST00000375213 3741 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC5P40937 MRPL50-201ENST00000374865 3332 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC5P40937 AL157777.2-201ENST00000258070 137 ntBASIC5.28□□□□□ -1.56
RFC5P40937 RAD17-208ENST00000380774 2117 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC5P40937 RNU6-1279P-201ENST00000383917 103 ntBASIC5.28□□□□□ -1.56
RFC5P40937 RNU6-21P-201ENST00000384710 107 ntBASIC5.28□□□□□ -1.56
RFC5P40937 RPS16P5-201ENST00000406501 404 ntBASIC5.28□□□□□ -1.56
RFC5P40937 MTHFD2P2-201ENST00000407725 247 ntBASIC5.28□□□□□ -1.56
RFC5P40937 AC017079.2-201ENST00000416102 485 ntBASIC5.28□□□□□ -1.56
RFC5P40937 AL096678.1-201ENST00000438877 472 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC5P40937 AC096638.1-201ENST00000444678 216 ntBASIC5.28□□□□□ -1.56
RFC5P40937 HMGB3P8-201ENST00000449709 577 ntBASIC5.28□□□□□ -1.56
RFC5P40937 AC010326.1-201ENST00000462726 602 ntBASIC5.28□□□□□ -1.56
RFC5P40937 AC008957.1-201ENST00000510740 478 ntTSL 3 BASIC5.28□□□□□ -1.56
RFC5P40937 RN7SKP49-201ENST00000516675 260 ntBASIC5.28□□□□□ -1.56
RFC5P40937 RNU6-1198P-201ENST00000516904 67 ntBASIC5.28□□□□□ -1.56
RFC5P40937 AC010197.1-201ENST00000541860 578 ntTSL 4 BASIC5.28□□□□□ -1.56
RFC5P40937 LINC02386-202ENST00000551287 564 ntTSL 4 BASIC5.28□□□□□ -1.56
RFC5P40937 HSPE1P5-201ENST00000561489 272 ntBASIC5.28□□□□□ -1.56
RFC5P40937 AC009120.5-201ENST00000561669 475 ntTSL 5 BASIC5.28□□□□□ -1.56
RFC5P40937 AC093249.4-201ENST00000564755 259 ntBASIC5.28□□□□□ -1.56
RFC5P40937 Z83818.1-201ENST00000603584 150 ntBASIC5.28□□□□□ -1.56
RFC5P40937 IGKV2OR2-2-201ENST00000605025 300 ntBASIC5.28□□□□□ -1.56
RFC5P40937 AC005296.1-201ENST00000616145 209 ntBASIC5.28□□□□□ -1.56
RFC5P40937 SLC44A5-201ENST00000370855 4406 ntAPPRIS P3 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC5P40937 LRP6-201ENST00000261349 10020 ntAPPRIS P1 TSL 1 (best) BASIC5.28□□□□□ -1.56
RFC5P40937 OR8H2-203ENST00000641311 3092 ntAPPRIS P2 BASIC5.27□□□□□ -1.57
RFC5P40937 UGT2A1-203ENST00000503640 2595 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RFC5P40937 MGAT4C-207ENST00000552808 1937 ntAPPRIS P1 TSL 2 BASIC5.27□□□□□ -1.57
RFC5P40937 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 ZNF285-205ENST00000614994 6012 ntAPPRIS P3 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 OR1C1-202ENST00000641256 3719 ntAPPRIS P1 BASIC5.27□□□□□ -1.57
RFC5P40937 AL590240.1-201ENST00000334118 313 ntBASIC5.27□□□□□ -1.57
RFC5P40937 RNU6-50P-201ENST00000362356 103 ntBASIC5.27□□□□□ -1.57
RFC5P40937 RNU6-137P-201ENST00000363680 108 ntBASIC5.27□□□□□ -1.57
RFC5P40937 Y_RNA.319-201ENST00000365138 92 ntBASIC5.27□□□□□ -1.57
RFC5P40937 RPL23AP95-201ENST00000426806 265 ntBASIC5.27□□□□□ -1.57
RFC5P40937 VDAC1P3-201ENST00000434069 851 ntBASIC5.27□□□□□ -1.57
RFC5P40937 AC013727.2-201ENST00000447761 545 ntTSL 4 BASIC5.27□□□□□ -1.57
RFC5P40937 BTF3P6-201ENST00000448054 499 ntBASIC5.27□□□□□ -1.57
RFC5P40937 AC125238.1-201ENST00000448842 249 ntBASIC5.27□□□□□ -1.57
RFC5P40937 LINC01810-201ENST00000450397 411 ntTSL 3 BASIC5.27□□□□□ -1.57
RFC5P40937 AC097462.2-201ENST00000504623 481 ntBASIC5.27□□□□□ -1.57
RFC5P40937 AC015468.4-201ENST00000523496 568 ntTSL 4 BASIC5.27□□□□□ -1.57
RFC5P40937 AK6P2-201ENST00000549020 471 ntBASIC5.27□□□□□ -1.57
RFC5P40937 AC113146.1-202ENST00000560259 433 ntTSL 5 BASIC5.27□□□□□ -1.57
RFC5P40937 LINC00511-212ENST00000581183 657 ntTSL 3 BASIC5.27□□□□□ -1.57
RFC5P40937 RNMT-209ENST00000592764 4108 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC5P40937 AC019159.1-201ENST00000605094 187 ntBASIC5.27□□□□□ -1.57
RFC5P40937 AL138963.2-201ENST00000605137 226 ntBASIC5.27□□□□□ -1.57
RFC5P40937 MIR6134-201ENST00000617606 109 ntBASIC5.27□□□□□ -1.57
RFC5P40937 FGF13-202ENST00000315930 19519 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 PPIG-201ENST00000260970 6368 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 MFSD8-216ENST00000641147 4009 ntBASIC5.27□□□□□ -1.57
RFC5P40937 PIK3C3-201ENST00000262039 9443 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 DST-202ENST00000312431 17756 ntAPPRIS P2 TSL 5 BASIC5.27□□□□□ -1.57
RFC5P40937 DGKH-206ENST00000536612 3957 ntTSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 SLCO1C1-201ENST00000266509 3365 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 POU2F1-202ENST00000367862 14038 ntAPPRIS ALT2 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 CLVS1-201ENST00000325897 3486 ntAPPRIS P1 TSL 1 (best) BASIC5.27□□□□□ -1.57
RFC5P40937 ATP2C1-205ENST00000504381 3498 ntTSL 2 BASIC5.27□□□□□ -1.57
RFC5P40937 WDR72-202ENST00000396328 7507 ntAPPRIS P2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC5P40937 CAST-201ENST00000309190 4282 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC5P40937 KIAA1456-203ENST00000524591 9587 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RFC5P40937 DNAH6-202ENST00000389394 12795 ntAPPRIS P1 TSL 5 BASIC5.26□□□□□ -1.57
RFC5P40937 RNU6-600P-201ENST00000362524 99 ntBASIC5.26□□□□□ -1.57
RFC5P40937 RNA5SP189-201ENST00000364920 115 ntBASIC5.26□□□□□ -1.57
RFC5P40937 TRAJ48-201ENST00000390489 63 ntAPPRIS P1 BASIC5.26□□□□□ -1.57
RFC5P40937 RNU1-82P-201ENST00000390851 165 ntBASIC5.26□□□□□ -1.57
RFC5P40937 PCNPP3-201ENST00000393579 471 ntBASIC5.26□□□□□ -1.57
RFC5P40937 MIR888-201ENST00000401186 77 ntBASIC5.26□□□□□ -1.57
RFC5P40937 RN7SKP267-201ENST00000410381 285 ntBASIC5.26□□□□□ -1.57
RFC5P40937 AL390729.2-201ENST00000416137 156 ntBASIC5.26□□□□□ -1.57
RFC5P40937 AC245028.1-201ENST00000423259 256 ntBASIC5.26□□□□□ -1.57
RFC5P40937 SSXP4-201ENST00000451349 245 ntBASIC5.26□□□□□ -1.57
RFC5P40937 AL590422.1-201ENST00000451829 364 ntTSL 3 BASIC5.26□□□□□ -1.57
RFC5P40937 FO393401.1-201ENST00000453914 600 ntTSL 3 BASIC5.26□□□□□ -1.57
RFC5P40937 COX6CP14-201ENST00000469580 174 ntBASIC5.26□□□□□ -1.57
RFC5P40937 AC023141.12-201ENST00000512399 199 ntBASIC5.26□□□□□ -1.57
RFC5P40937 RNA5SP464-201ENST00000516251 108 ntBASIC5.26□□□□□ -1.57
RFC5P40937 AC083973.1-205ENST00000518994 601 ntTSL 2 BASIC5.26□□□□□ -1.57
RFC5P40937 AC022915.1-201ENST00000521660 289 ntTSL 3 BASIC5.26□□□□□ -1.57
RFC5P40937 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC5.26□□□□□ -1.57
RFC5P40937 AC024405.2-202ENST00000532731 184 ntBASIC5.26□□□□□ -1.57
RFC5P40937 CR383656.8-201ENST00000549046 145 ntBASIC5.26□□□□□ -1.57
RFC5P40937 MIR4330-201ENST00000579077 105 ntBASIC5.26□□□□□ -1.57
RFC5P40937 RN7SL435P-201ENST00000584418 282 ntBASIC5.26□□□□□ -1.57
RFC5P40937 AC016747.2-202ENST00000607743 332 ntTSL 5 BASIC5.26□□□□□ -1.57
RFC5P40937 TLR8-201ENST00000218032 4216 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC5P40937 FMN1-202ENST00000334528 12355 ntAPPRIS P3 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC5P40937 SETDB2-202ENST00000317257 5619 ntAPPRIS ALT2 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC5P40937 MGAT4C-211ENST00000621808 2582 ntAPPRIS P1 TSL 1 (best) BASIC5.26□□□□□ -1.57
RFC5P40937 PCDH9-201ENST00000377861 28227 ntTSL 1 (best) BASIC5.25□□□□□ -1.57
RFC5P40937 PIGN-245ENST00000640252 7924 ntAPPRIS P1 TSL 1 (best) BASIC5.25□□□□□ -1.57
Retrieved 100 of 98,524 protein–RNA pairs in 108.1 ms