Protein–RNA interactions for Protein: P31273

HOXC8, Homeobox protein Hox-C8, humanhuman

Predictions only

Length 242 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HOXC8P31273 uc_338.12-201ENST00000616344 181 ntBASIC3.1□□□□□ -1.91
HOXC8P31273 SRP54-214ENST00000630962 162 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC8P31273 ERBIN-204ENST00000380943 6410 ntAPPRIS P3 TSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC8P31273 LINC01416-201ENST00000563553 2310 ntTSL 1 (best) BASIC3.1□□□□□ -1.91
HOXC8P31273 AC099654.7-201ENST00000635788 2127 ntBASIC3.1□□□□□ -1.91
HOXC8P31273 BCLAF1-205ENST00000527536 5371 ntTSL 5 BASIC3.1□□□□□ -1.91
HOXC8P31273 EIF2AK2-204ENST00000405334 1533 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC8P31273 AGTR1-204ENST00000418473 2071 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC8P31273 RNY1P12-201ENST00000364251 105 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 Y_RNA.245-201ENST00000364493 95 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 RNU6-1283P-201ENST00000365314 105 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 AKAP14-203ENST00000371425 793 ntAPPRIS ALT2 TSL 5 BASIC3.09□□□□□ -1.91
HOXC8P31273 AL354864.1-201ENST00000373226 539 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC8P31273 RNU6-1103P-201ENST00000384150 107 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 RNU6-217P-201ENST00000384164 104 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 RNU6-456P-201ENST00000384493 107 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 MIR767-201ENST00000390228 109 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 TRAV40-201ENST00000390467 317 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HOXC8P31273 TRDJ1-201ENST00000390473 51 ntAPPRIS P1 BASIC3.09□□□□□ -1.91
HOXC8P31273 AL359634.1-202ENST00000404721 284 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 NT5C3A-205ENST00000409467 1032 ntAPPRIS ALT1 TSL 5 BASIC3.09□□□□□ -1.91
HOXC8P31273 AC073311.1-201ENST00000420146 505 ntTSL 5 BASIC3.09□□□□□ -1.91
HOXC8P31273 MTCO2P19-201ENST00000427513 598 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 ELOCP14-201ENST00000428070 331 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 ELOCP7-201ENST00000439968 331 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 AL139260.1-202ENST00000456813 441 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC8P31273 MTCO3P38-201ENST00000468910 766 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 AC023194.1-201ENST00000493084 308 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 AC092944.1-205ENST00000494885 517 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXC8P31273 AC022272.1-201ENST00000503478 777 ntTSL 2 BASIC3.09□□□□□ -1.91
HOXC8P31273 AC019235.1-201ENST00000503847 207 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 RNA5SP380-201ENST00000517190 98 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 SNORA31.26-201ENST00000517250 137 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 AC090138.1-201ENST00000524493 578 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXC8P31273 HOMER1-205ENST00000535690 642 ntTSL 1 (best) BASIC3.09□□□□□ -1.91
HOXC8P31273 AK6P1-201ENST00000540219 478 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 AC090023.1-201ENST00000545750 443 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC8P31273 AC113137.1-201ENST00000591869 558 ntTSL 4 BASIC3.09□□□□□ -1.91
HOXC8P31273 AC103858.1-201ENST00000607019 476 ntTSL 3 BASIC3.09□□□□□ -1.91
HOXC8P31273 PSMD5-AS1-215ENST00000640622 205 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 AC004944.1-201ENST00000517807 3059 ntBASIC3.09□□□□□ -1.91
HOXC8P31273 DDX60L-207ENST00000505890 4568 ntTSL 2 BASIC3.09□□□□□ -1.92
HOXC8P31273 OR4M1-202ENST00000641200 3493 ntAPPRIS P1 BASIC3.09□□□□□ -1.92
HOXC8P31273 ELF1-201ENST00000239882 3566 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC8P31273 AC010680.1-201ENST00000590024 3590 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 LTN1-201ENST00000361371 7685 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC8P31273 RNU6-859P-201ENST00000362728 107 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 Y_RNA.159-201ENST00000363674 87 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 RNU6-1090P-201ENST00000364065 94 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 Y_RNA.256-201ENST00000364594 104 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 RNU6-169P-201ENST00000365336 107 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 DYNLT3P1-201ENST00000378574 347 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 Y_RNA.450-201ENST00000384198 113 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 SNORA67.4-201ENST00000384688 142 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 MTND4LP11-201ENST00000422184 280 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 AC114808.2-201ENST00000428335 536 ntTSL 4 BASIC3.08□□□□□ -1.92
HOXC8P31273 RPL23AP30-201ENST00000432419 501 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 AL139289.1-201ENST00000436713 731 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC8P31273 RBMX2P4-201ENST00000441256 376 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 AL354936.1-201ENST00000441521 649 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC8P31273 MTATP6P30-201ENST00000443540 664 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 AL136164.1-201ENST00000456795 352 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC8P31273 LINC00430-201ENST00000457672 597 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC8P31273 AC087588.1-201ENST00000462203 316 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 MTCO2P29-201ENST00000465212 189 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 MCCC1-AS1-201ENST00000471731 765 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC8P31273 AC126389.1-201ENST00000477436 290 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 AC034223.1-201ENST00000511054 599 ntTSL 3 BASIC3.08□□□□□ -1.92
HOXC8P31273 RN7SKP43-201ENST00000516173 320 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 Y_RNA.704-201ENST00000516851 102 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 AC091534.1-202ENST00000549953 468 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC8P31273 AC141273.1-201ENST00000565300 479 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC8P31273 AC022150.3-201ENST00000599143 880 ntTSL 5 BASIC3.08□□□□□ -1.92
HOXC8P31273 Z84480.1-201ENST00000605131 311 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 AC107294.1-201ENST00000609524 467 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 C8orf59-208ENST00000612809 475 ntAPPRIS P1 TSL 1 (best) BASIC3.08□□□□□ -1.92
HOXC8P31273 AC008669.1-201ENST00000565823 2178 ntBASIC3.08□□□□□ -1.92
HOXC8P31273 UEVLD-208ENST00000535484 1963 ntTSL 2 BASIC3.07□□□□□ -1.92
HOXC8P31273 NEDD4-208ENST00000508342 7235 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC8P31273 HMGB1-201ENST00000326004 821 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC8P31273 Y_RNA.9-201ENST00000362354 101 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 FGFR1OP2P1-201ENST00000395943 500 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AL353193.1-201ENST00000421444 268 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 MTND1P2-201ENST00000430604 821 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AL714022.1-201ENST00000439897 151 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AC004691.1-201ENST00000440376 547 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC8P31273 LINC00393-201ENST00000443621 282 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC8P31273 AC013269.3-201ENST00000450486 444 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC8P31273 FGF7P6-202ENST00000451282 293 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AC027673.1-201ENST00000456245 405 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 MTAPP1-201ENST00000489154 819 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AC079382.1-201ENST00000493346 557 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 SMAD1-AS2-201ENST00000508936 1090 ntTSL 1 (best) BASIC3.07□□□□□ -1.92
HOXC8P31273 RN7SKP258-201ENST00000517151 304 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AP003469.3-201ENST00000518090 473 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC8P31273 OR5AQ1P-201ENST00000527596 927 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 AL512310.1-201ENST00000548639 172 ntBASIC3.07□□□□□ -1.92
HOXC8P31273 G2E3-AS1-202ENST00000550118 609 ntTSL 5 BASIC3.07□□□□□ -1.92
HOXC8P31273 EGLN3-AS1-201ENST00000555922 308 ntTSL 3 BASIC3.07□□□□□ -1.92
HOXC8P31273 HMGB1P33-201ENST00000563485 527 ntBASIC3.07□□□□□ -1.92
Retrieved 100 of 98,524 protein–RNA pairs in 134.2 ms