Protein–RNA interactions for Protein: P13611

VCAN, Versican core protein, humanhuman

Predictions only

Length 3,396 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VCANP13611 RNU6-349P-201ENST00000362402 107 ntBASIC0.12□□□□□ -2.39
VCANP13611 AC009302.1-201ENST00000417147 390 ntBASIC0.12□□□□□ -2.39
VCANP13611 AC244023.1-201ENST00000426884 112 ntBASIC0.12□□□□□ -2.39
VCANP13611 AL591721.1-201ENST00000439849 751 ntTSL 3 BASIC0.12□□□□□ -2.39
VCANP13611 SCARNA16.5-201ENST00000517114 183 ntBASIC0.12□□□□□ -2.39
VCANP13611 AC105094.2-203ENST00000590357 555 ntTSL 4 BASIC0.12□□□□□ -2.39
VCANP13611 AC242498.1-201ENST00000604134 111 ntBASIC0.12□□□□□ -2.39
VCANP13611 AC243994.1-201ENST00000618627 109 ntBASIC0.12□□□□□ -2.39
VCANP13611 AC092047.1-201ENST00000424997 240 ntBASIC0.12□□□□□ -2.39
VCANP13611 ISCA1P1-201ENST00000426679 387 ntBASIC0.12□□□□□ -2.39
VCANP13611 snoU13.21-201ENST00000459368 105 ntBASIC0.12□□□□□ -2.39
VCANP13611 AC078857.1-201ENST00000469870 667 ntBASIC0.12□□□□□ -2.39
VCANP13611 RPS26P55-201ENST00000471178 356 ntBASIC0.12□□□□□ -2.39
VCANP13611 COX7A2P2-201ENST00000505291 250 ntBASIC0.12□□□□□ -2.39
VCANP13611 AC114284.1-201ENST00000511422 1114 ntTSL 2 BASIC0.12□□□□□ -2.39
VCANP13611 SCARNA11.3-201ENST00000517276 130 ntBASIC0.12□□□□□ -2.39
VCANP13611 LINC01584-203ENST00000567231 646 ntTSL 5 BASIC0.12□□□□□ -2.39
VCANP13611 AC044840.1-201ENST00000577641 472 ntTSL 3 BASIC0.12□□□□□ -2.39
VCANP13611 AP000811.1-201ENST00000603803 651 ntBASIC0.12□□□□□ -2.39
VCANP13611 LRIF1-203ENST00000494675 1912 ntAPPRIS ALT2 TSL 2 BASIC0.12□□□□□ -2.39
VCANP13611 LINC01473-203ENST00000456653 1079 ntTSL 3 BASIC0.11□□□□□ -2.39
VCANP13611 AP001893.2-201ENST00000526949 202 ntBASIC0.11□□□□□ -2.39
VCANP13611 LINC02461-201ENST00000553211 836 ntTSL 3 BASIC0.11□□□□□ -2.39
VCANP13611 PARPBP-203ENST00000392911 1916 ntTSL 5 BASIC0.11□□□□□ -2.39
VCANP13611 AC009518.2-201ENST00000418056 731 ntBASIC0.11□□□□□ -2.39
VCANP13611 AC008080.3-201ENST00000440074 380 ntTSL 3 BASIC0.11□□□□□ -2.39
VCANP13611 SATB1-AS1-258ENST00000629405 664 ntTSL 5 BASIC0.11□□□□□ -2.39
VCANP13611 RNU6-799P-201ENST00000363567 107 ntBASIC0.11□□□□□ -2.39
VCANP13611 AL645638.1-201ENST00000440519 361 ntBASIC0.11□□□□□ -2.39
VCANP13611 FAM206BP-201ENST00000510179 541 ntBASIC0.11□□□□□ -2.39
VCANP13611 LINC02484-202ENST00000514877 546 ntTSL 3 BASIC0.11□□□□□ -2.39
VCANP13611 AC055720.2-201ENST00000537724 172 ntTSL 3 BASIC0.11□□□□□ -2.39
VCANP13611 UGP2-231ENST00000627474 264 ntTSL 5 BASIC0.11□□□□□ -2.39
VCANP13611 SNORD114-28-201ENST00000363610 72 ntBASIC0.1□□□□□ -2.39
VCANP13611 XIST-201ENST00000416330 750 ntTSL 2 BASIC0.1□□□□□ -2.39
VCANP13611 PIGFP2-201ENST00000421400 651 ntBASIC0.1□□□□□ -2.39
VCANP13611 CR769776.1-201ENST00000441254 787 ntBASIC0.1□□□□□ -2.39
VCANP13611 AC095059.1-201ENST00000502570 349 ntTSL 5 BASIC0.1□□□□□ -2.39
VCANP13611 AC008834.1-201ENST00000511612 175 ntBASIC0.1□□□□□ -2.39
VCANP13611 AC011477.3-201ENST00000585571 403 ntTSL 5 BASIC0.1□□□□□ -2.39
VCANP13611 AC009509.4-201ENST00000619202 509 ntBASIC0.1□□□□□ -2.39
VCANP13611 MTND4P16-201ENST00000466108 1367 ntBASIC0.1□□□□□ -2.39
VCANP13611 Y_RNA.55-201ENST00000362797 102 ntBASIC0.1□□□□□ -2.39
VCANP13611 AL157786.1-206ENST00000424422 551 ntTSL 3 BASIC0.1□□□□□ -2.39
VCANP13611 AL592309.2-201ENST00000444647 607 ntTSL 5 BASIC0.1□□□□□ -2.39
VCANP13611 AC025566.1-201ENST00000477153 490 ntTSL 3 BASIC0.1□□□□□ -2.39
VCANP13611 AC092892.1-201ENST00000496067 327 ntTSL 5 BASIC0.1□□□□□ -2.39
VCANP13611 AC069133.1-201ENST00000522857 566 ntTSL 4 BASIC0.1□□□□□ -2.39
VCANP13611 NBEAP1-201ENST00000554452 979 ntBASIC0.1□□□□□ -2.39
VCANP13611 AL133507.1-201ENST00000605269 557 ntBASIC0.1□□□□□ -2.39
VCANP13611 ZNF382-210ENST00000639288 834 ntTSL 5 BASIC0.1□□□□□ -2.39
VCANP13611 CRISP3-203ENST00000371159 872 ntAPPRIS ALT2 TSL 5 BASIC0.09□□□□□ -2.39
VCANP13611 RPL37P10-201ENST00000412884 288 ntBASIC0.09□□□□□ -2.39
VCANP13611 NIFKP6-201ENST00000598115 845 ntBASIC0.09□□□□□ -2.39
VCANP13611 XIAPP1-201ENST00000603162 600 ntBASIC0.09□□□□□ -2.39
VCANP13611 AC114546.3-201ENST00000623582 1734 ntBASIC0.09□□□□□ -2.39
VCANP13611 RNU6-348P-201ENST00000384386 107 ntBASIC0.09□□□□□ -2.39
VCANP13611 OFD1P2Y-201ENST00000421895 1149 ntBASIC0.09□□□□□ -2.39
VCANP13611 TRAPPC2P3-201ENST00000443200 321 ntBASIC0.09□□□□□ -2.39
VCANP13611 TPTE2P6-202ENST00000445572 1007 ntBASIC0.09□□□□□ -2.39
VCANP13611 MRPL42-204ENST00000548545 692 ntAPPRIS ALT1 TSL 2 BASIC0.09□□□□□ -2.39
VCANP13611 AC009220.3-201ENST00000604318 586 ntBASIC0.09□□□□□ -2.39
VCANP13611 AL050331.3-201ENST00000448740 2081 ntTSL 2 BASIC0.09□□□□□ -2.39
VCANP13611 RNY4P7-201ENST00000364600 96 ntBASIC0.09□□□□□ -2.4
VCANP13611 Y_RNA.375-201ENST00000365625 101 ntBASIC0.09□□□□□ -2.4
VCANP13611 AF130351.1-202ENST00000400562 808 ntAPPRIS P5 TSL 3 BASIC0.09□□□□□ -2.4
VCANP13611 BPY2DP-201ENST00000422208 265 ntBASIC0.09□□□□□ -2.4
VCANP13611 AC239802.1-201ENST00000531288 406 ntTSL 5 BASIC0.09□□□□□ -2.4
VCANP13611 LINC00933-203ENST00000559812 219 ntBASIC0.09□□□□□ -2.4
VCANP13611 OR5B3-202ENST00000641865 1046 ntAPPRIS P1 BASIC0.09□□□□□ -2.4
VCANP13611 RNU1-72P-201ENST00000362976 153 ntBASIC0.08□□□□□ -2.4
VCANP13611 TRAPPC2P9-201ENST00000434556 343 ntBASIC0.08□□□□□ -2.4
VCANP13611 SNORD108-201ENST00000459332 71 ntBASIC0.08□□□□□ -2.4
VCANP13611 SCOC-AS1-203ENST00000609616 405 ntTSL 3 BASIC0.08□□□□□ -2.4
VCANP13611 AC011155.2-201ENST00000623202 216 ntBASIC0.08□□□□□ -2.4
VCANP13611 PRPSAP2-229ENST00000628609 192 ntTSL 5 BASIC0.08□□□□□ -2.4
VCANP13611 TTTY3-201ENST00000417334 344 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
VCANP13611 AC006042.4-201ENST00000451066 692 ntTSL 5 BASIC0.08□□□□□ -2.4
VCANP13611 PSMC1P5-201ENST00000512850 177 ntBASIC0.08□□□□□ -2.4
VCANP13611 AC115085.1-201ENST00000588924 229 ntBASIC0.08□□□□□ -2.4
VCANP13611 TTTY3B-201ENST00000631331 344 ntTSL 1 (best) BASIC0.08□□□□□ -2.4
VCANP13611 AL161935.1-201ENST00000420945 421 ntTSL 3 BASIC0.08□□□□□ -2.4
VCANP13611 AC107208.1-201ENST00000508265 519 ntTSL 4 BASIC0.08□□□□□ -2.4
VCANP13611 AC091976.1-202ENST00000509211 630 ntTSL 3 BASIC0.07□□□□□ -2.4
VCANP13611 COL6A4P2-205ENST00000509855 506 ntBASIC0.07□□□□□ -2.4
VCANP13611 MIR6516-201ENST00000630554 81 ntBASIC0.07□□□□□ -2.4
VCANP13611 NTS-201ENST00000256010 1237 ntAPPRIS P1 TSL 1 (best) BASIC0.07□□□□□ -2.4
VCANP13611 CD24P4-201ENST00000382840 243 ntBASIC0.07□□□□□ -2.4
VCANP13611 HSPE1P21-201ENST00000438283 308 ntBASIC0.07□□□□□ -2.4
VCANP13611 AP1S2P1-201ENST00000457344 379 ntBASIC0.07□□□□□ -2.4
VCANP13611 AC012055.1-201ENST00000511346 1144 ntTSL 3 BASIC0.07□□□□□ -2.4
VCANP13611 U3.9-201ENST00000363823 204 ntBASIC0.06□□□□□ -2.4
VCANP13611 SNORA38-201ENST00000363946 132 ntBASIC0.06□□□□□ -2.4
VCANP13611 VN1R36P-201ENST00000414936 291 ntBASIC0.06□□□□□ -2.4
VCANP13611 EFCAB14-AS1-201ENST00000418985 491 ntTSL 3 BASIC0.06□□□□□ -2.4
VCANP13611 RPL7P31-201ENST00000450192 724 ntBASIC0.06□□□□□ -2.4
VCANP13611 TBL1XR1-AS1-201ENST00000454723 414 ntTSL 5 BASIC0.06□□□□□ -2.4
VCANP13611 AC096577.1-203ENST00000506386 541 ntTSL 3 BASIC0.06□□□□□ -2.4
VCANP13611 SNORD116-26-201ENST00000516006 96 ntBASIC0.06□□□□□ -2.4
VCANP13611 AC034114.1-201ENST00000520293 285 ntBASIC0.06□□□□□ -2.4
Retrieved 100 of 98,524 protein–RNA pairs in 105.5 ms