Protein–RNA interactions for Protein: O43196

MSH5, MutS protein homolog 5, humanhuman

Predictions only

Length 834 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
MSH5O43196 RAP1GDS1-206ENST00000453712 2470 ntAPPRIS ALT1 TSL 1 (best) BASIC8.22□□□□□ -1.09
MSH5O43196 NBPF12-204ENST00000613714 2701 ntTSL 5 BASIC8.22□□□□□ -1.09
MSH5O43196 PSG1-201ENST00000244296 2276 ntAPPRIS P3 TSL 1 (best) BASIC8.22□□□□□ -1.09
MSH5O43196 PLCE1-201ENST00000371375 6514 ntAPPRIS ALT2 TSL 1 (best) BASIC8.21□□□□□ -1.09
MSH5O43196 BIRC3-207ENST00000615299 4342 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
MSH5O43196 RNU1-100P-201ENST00000365255 165 ntBASIC8.21□□□□□ -1.1
MSH5O43196 SCARNA15.2-201ENST00000516409 127 ntBASIC8.21□□□□□ -1.1
MSH5O43196 TPRX1P1-201ENST00000557620 319 ntBASIC8.21□□□□□ -1.1
MSH5O43196 RN7SL787P-201ENST00000613000 284 ntBASIC8.21□□□□□ -1.1
MSH5O43196 WDR64-201ENST00000366552 4371 ntAPPRIS P1 TSL 5 BASIC8.21□□□□□ -1.1
MSH5O43196 CPEB4-202ENST00000334035 6705 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MSH5O43196 CSDE1-202ENST00000339438 4006 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MSH5O43196 DMD-205ENST00000359836 7339 ntTSL 5 BASIC8.21□□□□□ -1.1
MSH5O43196 PCDH18-203ENST00000507846 4625 ntTSL 1 (best) BASIC8.21□□□□□ -1.1
MSH5O43196 ZNF559-201ENST00000317221 2732 ntTSL 2 BASIC8.21□□□□□ -1.1
MSH5O43196 PIK3C2G-203ENST00000535651 2497 ntTSL 5 BASIC8.21□□□□□ -1.1
MSH5O43196 MAK-204ENST00000536370 3767 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MSH5O43196 PIGN-239ENST00000639902 4439 ntTSL 5 BASIC8.2□□□□□ -1.1
MSH5O43196 AL359955.1-201ENST00000455242 3275 ntBASIC8.2□□□□□ -1.1
MSH5O43196 PHLDB2-214ENST00000495180 4159 ntTSL 2 BASIC8.2□□□□□ -1.1
MSH5O43196 FANCD2-203ENST00000419585 5185 ntAPPRIS ALT2 TSL 1 (best) BASIC8.2□□□□□ -1.1
MSH5O43196 LIX1-201ENST00000274382 4026 ntAPPRIS P1 TSL 1 (best) BASIC8.2□□□□□ -1.1
MSH5O43196 LINC01043-201ENST00000565936 6897 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MSH5O43196 ZNF418-212ENST00000616958 2212 ntAPPRIS P3 TSL 1 (best) BASIC8.2□□□□□ -1.1
MSH5O43196 RNA5SP110-201ENST00000362638 115 ntBASIC8.2□□□□□ -1.1
MSH5O43196 KRTAP8-2P-201ENST00000440620 186 ntBASIC8.2□□□□□ -1.1
MSH5O43196 NHS-AS1-201ENST00000452788 366 ntTSL 3 BASIC8.2□□□□□ -1.1
MSH5O43196 Y_RNA.667-201ENST00000516212 107 ntBASIC8.2□□□□□ -1.1
MSH5O43196 AC073916.1-201ENST00000545095 130 ntBASIC8.2□□□□□ -1.1
MSH5O43196 PTP4A1-204ENST00000578299 135 ntTSL 2 BASIC8.2□□□□□ -1.1
MSH5O43196 RN7SL475P-201ENST00000583379 298 ntBASIC8.2□□□□□ -1.1
MSH5O43196 POSTN-204ENST00000379749 3210 ntTSL 5 BASIC8.2□□□□□ -1.1
MSH5O43196 MTAP-210ENST00000580900 7557 ntTSL 1 (best) BASIC8.2□□□□□ -1.1
MSH5O43196 SLC35F1-202ENST00000621341 4481 ntAPPRIS ALT2 TSL 5 BASIC8.2□□□□□ -1.1
MSH5O43196 NOX4-205ENST00000424319 4184 ntTSL 5 BASIC8.2□□□□□ -1.1
MSH5O43196 MGAM-202ENST00000475668 9172 ntAPPRIS P1 TSL 5 BASIC8.2□□□□□ -1.1
MSH5O43196 MTOR-202ENST00000376838 4017 ntTSL 2 BASIC8.19□□□□□ -1.1
MSH5O43196 MDM4-204ENST00000367183 9098 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 SNX13-213ENST00000611725 6817 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 MBNL2-201ENST00000343600 4596 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 B3GALT2-201ENST00000367434 3274 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 KLHL2-210ENST00000538127 2907 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 OR4N2-201ENST00000315947 924 ntAPPRIS P1 BASIC8.19□□□□□ -1.1
MSH5O43196 RNA5SP273-201ENST00000362484 113 ntBASIC8.19□□□□□ -1.1
MSH5O43196 RNU1-64P-201ENST00000365443 163 ntBASIC8.19□□□□□ -1.1
MSH5O43196 MIR937-201ENST00000401271 86 ntBASIC8.19□□□□□ -1.1
MSH5O43196 AC099548.1-201ENST00000421443 426 ntBASIC8.19□□□□□ -1.1
MSH5O43196 AC092047.1-201ENST00000424997 240 ntBASIC8.19□□□□□ -1.1
MSH5O43196 RNU6-70P-201ENST00000516438 60 ntBASIC8.19□□□□□ -1.1
MSH5O43196 AC107934.2-201ENST00000518653 310 ntBASIC8.19□□□□□ -1.1
MSH5O43196 IGLV2-28-201ENST00000520681 304 ntBASIC8.19□□□□□ -1.1
MSH5O43196 IGLV3-6-201ENST00000523937 250 ntBASIC8.19□□□□□ -1.1
MSH5O43196 HCG18-243ENST00000602498 327 ntTSL 3 BASIC8.19□□□□□ -1.1
MSH5O43196 RNU6-86P-201ENST00000606534 107 ntBASIC8.19□□□□□ -1.1
MSH5O43196 SNORA74.4-201ENST00000607595 199 ntBASIC8.19□□□□□ -1.1
MSH5O43196 JPX_2.1-201ENST00000614161 69 ntBASIC8.19□□□□□ -1.1
MSH5O43196 AL021997.2-201ENST00000615674 271 ntBASIC8.19□□□□□ -1.1
MSH5O43196 CCDC178-205ENST00000406524 3039 ntAPPRIS ALT2 TSL 5 BASIC8.19□□□□□ -1.1
MSH5O43196 AASDH-202ENST00000451613 3182 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 NBPF26-202ENST00000611287 2701 ntTSL 5 BASIC8.19□□□□□ -1.1
MSH5O43196 AC139713.2-214ENST00000642059 1811 ntBASIC8.19□□□□□ -1.1
MSH5O43196 LDHAL6CP-202ENST00000550738 3224 ntBASIC8.19□□□□□ -1.1
MSH5O43196 TOR1AIP2-201ENST00000367612 7905 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 CYLD-212ENST00000568704 3292 ntTSL 5 BASIC8.19□□□□□ -1.1
MSH5O43196 WDR72-208ENST00000614174 4224 ntTSL 2 BASIC8.19□□□□□ -1.1
MSH5O43196 CNKSR2-202ENST00000379510 5315 ntAPPRIS P1 TSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 SLF1-201ENST00000265140 5905 ntAPPRIS P1 TSL 2 BASIC8.19□□□□□ -1.1
MSH5O43196 AL022344.1-201ENST00000439913 3965 ntTSL 1 (best) BASIC8.19□□□□□ -1.1
MSH5O43196 INTS6-203ENST00000442263 15428 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MSH5O43196 SRBD1-201ENST00000263736 3681 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
MSH5O43196 AP000808.1-201ENST00000512200 3252 ntTSL 2 BASIC8.18□□□□□ -1.1
MSH5O43196 ZNF320-205ENST00000595635 6448 ntAPPRIS P1 TSL 2 BASIC8.18□□□□□ -1.1
MSH5O43196 ZNF585B-205ENST00000532828 6210 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MSH5O43196 RN7SKP286-201ENST00000410894 299 ntBASIC8.18□□□□□ -1.1
MSH5O43196 RPL35AP31-201ENST00000418340 337 ntBASIC8.18□□□□□ -1.1
MSH5O43196 IGKV3OR2-268-201ENST00000421835 350 ntAPPRIS P1 BASIC8.18□□□□□ -1.1
MSH5O43196 AL136131.2-201ENST00000424283 348 ntTSL 3 BASIC8.18□□□□□ -1.1
MSH5O43196 RPL37P4-201ENST00000448908 268 ntBASIC8.18□□□□□ -1.1
MSH5O43196 RN7SL51P-201ENST00000468230 285 ntBASIC8.18□□□□□ -1.1
MSH5O43196 AC022206.1-201ENST00000495947 347 ntBASIC8.18□□□□□ -1.1
MSH5O43196 RNA5SP438-201ENST00000516561 112 ntBASIC8.18□□□□□ -1.1
MSH5O43196 RN7SKP282-201ENST00000516824 299 ntBASIC8.18□□□□□ -1.1
MSH5O43196 AC022523.1-201ENST00000560360 364 ntTSL 5 BASIC8.18□□□□□ -1.1
MSH5O43196 COPS7B-225ENST00000631349 189 ntTSL 5 BASIC8.18□□□□□ -1.1
MSH5O43196 RMST-209ENST00000639542 3269 ntTSL 5 BASIC8.18□□□□□ -1.1
MSH5O43196 NRK-201ENST00000243300 8062 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MSH5O43196 RBM5-214ENST00000469838 2716 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MSH5O43196 CYYR1-AS1-201ENST00000357401 3412 ntTSL 2 BASIC8.18□□□□□ -1.1
MSH5O43196 CDKL5-205ENST00000623535 12533 ntAPPRIS P1 TSL 1 (best) BASIC8.18□□□□□ -1.1
MSH5O43196 AC007114.2-201ENST00000576014 4281 ntBASIC8.18□□□□□ -1.1
MSH5O43196 FMNL2-202ENST00000475377 3648 ntTSL 5 BASIC8.18□□□□□ -1.1
MSH5O43196 KIF20A-205ENST00000508792 2935 ntTSL 2 BASIC8.18□□□□□ -1.1
MSH5O43196 NKAIN2-204ENST00000545433 3052 ntTSL 5 BASIC8.18□□□□□ -1.1
MSH5O43196 PBRM1-207ENST00000409767 4849 ntTSL 1 (best) BASIC8.18□□□□□ -1.1
MSH5O43196 FAM35DP-201ENST00000323387 2712 ntBASIC8.17□□□□□ -1.1
MSH5O43196 AC092881.1-201ENST00000638218 2733 ntBASIC8.17□□□□□ -1.1
MSH5O43196 LINC01102-204ENST00000451400 3778 ntTSL 2 BASIC8.17□□□□□ -1.1
MSH5O43196 DHX32-201ENST00000284690 3070 ntAPPRIS P1 TSL 1 (best) BASIC8.17□□□□□ -1.1
MSH5O43196 AP005435.3-201ENST00000531260 3198 ntBASIC8.17□□□□□ -1.1
MSH5O43196 KRTAP13-6P-201ENST00000508999 371 ntBASIC8.17□□□□□ -1.1
Retrieved 100 of 98,524 protein–RNA pairs in 140.1 ms