Protein–RNA interactions for Protein: A0PJX4

SHISA3, Protein shisa-3 homolog, humanhuman

Predictions only

Length 238 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SHISA3A0PJX4 TAB3-AS2-201ENST00000445240 292 ntTSL 5 BASIC4□□□□□ -1.77
SHISA3A0PJX4 GSTA9P-202ENST00000448991 521 ntTSL 3 BASIC4□□□□□ -1.77
SHISA3A0PJX4 MTATP6P7-201ENST00000453315 681 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 TOMM22P6-201ENST00000465035 409 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 RN7SL727P-201ENST00000482164 296 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 RPL23AP49-201ENST00000492925 468 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 GYPA-208ENST00000512064 441 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHISA3A0PJX4 OR7H2P-201ENST00000513483 306 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 SNORA43.2-201ENST00000516652 128 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 IGHVII-53-1-201ENST00000519538 255 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 AC084880.2-201ENST00000536009 501 ntTSL 3 BASIC4□□□□□ -1.77
SHISA3A0PJX4 AC113418.1-201ENST00000569928 517 ntTSL 1 (best) BASIC4□□□□□ -1.77
SHISA3A0PJX4 MIR4659A-201ENST00000580269 81 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 AL138721.1-201ENST00000616756 179 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 MIR6730-201ENST00000622213 67 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 AC091905.2-201ENST00000623143 306 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 AC097372.5-201ENST00000623665 376 ntBASIC4□□□□□ -1.77
SHISA3A0PJX4 ZEB1-205ENST00000446923 6267 ntAPPRIS ALT2 TSL 5 BASIC4□□□□□ -1.77
SHISA3A0PJX4 DAZ1-205ENST00000540248 3268 ntTSL 5 BASIC4□□□□□ -1.77
SHISA3A0PJX4 DDX20-202ENST00000475700 4332 ntTSL 2 BASIC4□□□□□ -1.77
SHISA3A0PJX4 USP26-203ENST00000511190 3665 ntAPPRIS P1 TSL 2 BASIC4□□□□□ -1.77
SHISA3A0PJX4 XPO4-201ENST00000255305 9921 ntAPPRIS P2 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA3A0PJX4 STAG2-203ENST00000371145 4393 ntAPPRIS ALT1 TSL 1 (best) BASIC4□□□□□ -1.77
SHISA3A0PJX4 SEC31A-203ENST00000348405 4012 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 ZFRP1-201ENST00000457579 2970 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 MYNN-202ENST00000356716 2833 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 ORC4-202ENST00000392857 6530 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 MAP3K19-203ENST00000375845 4369 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 SNCA-AS1-201ENST00000501215 2646 ntTSL 2 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 SLC25A17-202ENST00000402844 2405 ntTSL 2 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 LYST-202ENST00000389794 12985 ntTSL 5 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RC3H1-201ENST00000258349 10988 ntAPPRIS P3 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 MIR448-201ENST00000362131 111 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 Y_RNA.16-201ENST00000362421 102 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 SNORD113-8-201ENST00000363497 74 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 Y_RNA.269-201ENST00000364685 89 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 SNORD63-201ENST00000384262 68 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RNU6-886P-201ENST00000384319 105 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 TRAJ58-201ENST00000390481 63 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 LGALS16-201ENST00000392051 624 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 U3.36-201ENST00000408418 213 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 MIR1298-201ENST00000408783 112 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RNA5SP39-201ENST00000411245 120 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RAB9AP3-201ENST00000412737 573 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RPL23AP27-201ENST00000415161 451 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AC079790.1-201ENST00000420365 507 ntTSL 3 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AL132875.2-201ENST00000436418 325 ntTSL 5 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 Z82188.1-201ENST00000436709 154 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RAB9AP1-201ENST00000449393 573 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RPS26P21-201ENST00000475397 348 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RPSAP50-201ENST00000481955 852 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RPL23AP75-201ENST00000491601 451 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RNU6-496P-201ENST00000516145 99 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 IFITM8P-201ENST00000522529 394 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AC002428.2-201ENST00000522973 414 ntTSL 3 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AC068789.1-201ENST00000547942 577 ntTSL 2 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AF099810.1-201ENST00000554219 525 ntTSL 3 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 CYCSP39-201ENST00000565821 309 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AC010928.2-201ENST00000588017 287 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RPL23AP88-201ENST00000605759 454 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 MIR7155-201ENST00000615925 56 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AC241585.2-209ENST00000638217 143 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AC022336.2-201ENST00000568966 2538 ntBASIC3.99□□□□□ -1.77
SHISA3A0PJX4 TMPRSS11A-202ENST00000508048 3247 ntAPPRIS ALT2 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 ITCH-202ENST00000374864 6401 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 PKHD1-202ENST00000371117 16282 ntAPPRIS P4 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 C5orf63-205ENST00000535381 5680 ntTSL 3 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 OR56A1-202ENST00000641423 6096 ntAPPRIS P1 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 GPR85-201ENST00000297146 5079 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 AL391684.1-201ENST00000416191 2998 ntTSL 5 BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 RANBP2-201ENST00000283195 11711 ntAPPRIS P1 TSL 1 (best) BASIC3.99□□□□□ -1.77
SHISA3A0PJX4 STAG2-205ENST00000371160 6045 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 VPS13A-206ENST00000376646 2262 ntTSL 5 BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 PTPRD-201ENST00000355233 8251 ntTSL 1 (best) BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 CASC1-203ENST00000395987 2363 ntAPPRIS P3 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 MAPK10-235ENST00000638225 8941 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 ADAM7-201ENST00000175238 3367 ntAPPRIS P2 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RNU4-90P-201ENST00000362773 141 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RNU6-527P-201ENST00000363425 104 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 Y_RNA.150-201ENST00000363562 102 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RNU6-290P-201ENST00000365212 101 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RFX3-203ENST00000381984 364 ntTSL 3 BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RNU6-1286P-201ENST00000383871 107 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RNU6-140P-201ENST00000384566 108 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 DEFB115-201ENST00000400552 267 ntAPPRIS P1 TSL 1 (best) BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 AC114755.2-201ENST00000413520 361 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 AL139254.1-201ENST00000421114 376 ntTSL 3 BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 AC009487.1-201ENST00000444164 403 ntTSL 3 BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 Z99127.1-202ENST00000448686 526 ntTSL 2 BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 SERF1AP1-201ENST00000514575 187 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RNU1-6P-201ENST00000516290 144 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 RNU6-1073P-201ENST00000517182 106 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 TRAPPC2P2-201ENST00000517589 409 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 AC107016.1-201ENST00000550463 337 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 LINC00933-203ENST00000559812 219 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 ZNF192P1-203ENST00000565888 810 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 AC107031.1-201ENST00000604939 347 ntTSL 2 BASIC3.98□□□□□ -1.77
SHISA3A0PJX4 AC073657.2-201ENST00000605661 303 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 AC093799.2-201ENST00000610062 578 ntBASIC3.98□□□□□ -1.77
SHISA3A0PJX4 AC005696.2-201ENST00000610120 626 ntTSL 3 BASIC3.98□□□□□ -1.77
Retrieved 100 of 98,524 protein–RNA pairs in 103.6 ms