Protein–RNA interactions for Protein: Q9Y5P3

RAI2, Retinoic acid-induced protein 2, humanhuman

Predictions only

Length 530 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAI2Q9Y5P3 DEDD2-209ENST00000598727 1037 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAI2Q9Y5P3 GRAMD4P8-201ENST00000605465 1115 ntBASIC19.27■□□□□ 0.68
RAI2Q9Y5P3 PAIP1-201ENST00000306846 2782 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAI2Q9Y5P3 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC19.27■□□□□ 0.68
RAI2Q9Y5P3 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC19.27■□□□□ 0.68
RAI2Q9Y5P3 IRX1P1-201ENST00000438849 1838 ntBASIC19.27■□□□□ 0.68
RAI2Q9Y5P3 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC19.27■□□□□ 0.68
RAI2Q9Y5P3 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.68
RAI2Q9Y5P3 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC19.27■□□□□ 0.67
RAI2Q9Y5P3 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.27■□□□□ 0.67
RAI2Q9Y5P3 SHANK1-203ENST00000391813 4785 ntTSL 1 (best) BASIC19.27■□□□□ 0.67
RAI2Q9Y5P3 NEU4-202ENST00000391969 2526 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 UBE2K-203ENST00000445950 2175 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 EMC6-201ENST00000248378 653 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 AC073343.2-203ENST00000366167 564 ntTSL 4 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 AL035541.1-201ENST00000424850 823 ntTSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 AC020911.2-202ENST00000588945 593 ntTSL 3 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 CD209-209ENST00000601256 994 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 LGALS9-202ENST00000313648 1378 ntTSL 3 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 PDZD3-203ENST00000525131 1882 ntTSL 2 BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 NECTIN1-201ENST00000264025 5840 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 LONRF3-202ENST00000371628 2550 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 CCDC88B-202ENST00000356786 4915 ntAPPRIS P1 TSL 1 (best) BASIC19.26■□□□□ 0.67
RAI2Q9Y5P3 SPAG16-209ENST00000447990 1330 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 PLAUR-203ENST00000340093 1548 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 GAL3ST1-206ENST00000406955 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 RFC2-213ENST00000621097 1635 ntTSL 5 BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 AC124066.1-201ENST00000581122 1660 ntTSL 5 BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 APIP-201ENST00000395787 1366 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 AC096733.2-201ENST00000609937 1394 ntBASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 CRYGFP-201ENST00000418459 633 ntBASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 ATP5S-204ENST00000426751 1171 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 MFAP1P1-201ENST00000442257 1255 ntBASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 REPIN1-217ENST00000518514 478 ntTSL 3 BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 SLC52A2-205ENST00000526752 710 ntTSL 3 BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 PDCD5-207ENST00000590247 699 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 YTHDC2-207ENST00000515883 2629 ntTSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 FOXN3-214ENST00000557258 2692 ntAPPRIS P3 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC19.25■□□□□ 0.67
RAI2Q9Y5P3 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 RAB11FIP4-211ENST00000621161 8628 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 ST3GAL4-205ENST00000449406 1669 ntTSL 5 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 GPR35-201ENST00000319838 2249 ntAPPRIS P3 TSL 2 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 PTMS-201ENST00000309083 1139 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 HBA1-201ENST00000320868 577 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 ID1-202ENST00000376112 994 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 MIR1238-201ENST00000408483 83 ntBASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 AL390955.1-201ENST00000428694 934 ntBASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 AP001059.1-201ENST00000442785 523 ntTSL 3 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 KCNIP3-205ENST00000468529 985 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 AC012213.1-202ENST00000523422 449 ntTSL 3 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 IRF7-203ENST00000397566 2051 ntAPPRIS P4 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 IQCJ-SCHIP1-204ENST00000485419 2445 ntAPPRIS ALT2 TSL 2 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 SELENOF-207ENST00000611507 1785 ntTSL 5 BASIC19.24■□□□□ 0.67
RAI2Q9Y5P3 FBXO24-201ENST00000241071 2276 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 GPR137-204ENST00000438980 1596 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 UBQLN4P1-201ENST00000461599 1801 ntBASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 OGFOD2-222ENST00000545317 1481 ntTSL 2 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 FEM1AP3-201ENST00000403722 1741 ntBASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC19.23■□□□□ 0.67
RAI2Q9Y5P3 FP475955.4-201ENST00000623131 1990 ntBASIC19.23■□□□□ 0.67
Retrieved 100 of 98,524 protein–RNA pairs in 21.4 ms