Protein–RNA interactions for Protein: Q9UHX1

PUF60, Poly(U)-binding-splicing factor PUF60, humanhuman

Known RBP Predictions only

Length 559 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60Q9UHX1 RGS9BP-201ENST00000334176 2894 ntAPPRIS P1 BASIC21.29■■□□□ 1
PUF60Q9UHX1 TESMIN-201ENST00000255087 2579 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 EDN3-204ENST00000371028 2397 ntAPPRIS P4 TSL 5 BASIC21.29■■□□□ 1
PUF60Q9UHX1 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 NDUFB10-201ENST00000268668 705 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 CLDND2-201ENST00000291715 974 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 NIFKP9-201ENST00000419265 221 ntBASIC21.29■■□□□ 1
PUF60Q9UHX1 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC21.29■■□□□ 1
PUF60Q9UHX1 USP46-AS1-201ENST00000503051 1048 ntTSL 3 BASIC21.29■■□□□ 1
PUF60Q9UHX1 AC080023.1-201ENST00000526906 803 ntTSL 2 BASIC21.29■■□□□ 1
PUF60Q9UHX1 TMEM235-204ENST00000551068 1187 ntAPPRIS P1 TSL 5 BASIC21.29■■□□□ 1
PUF60Q9UHX1 P4HB-223ENST00000576390 439 ntTSL 4 BASIC21.29■■□□□ 1
PUF60Q9UHX1 AC008735.6-201ENST00000635964 1292 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
PUF60Q9UHX1 FBXL3-201ENST00000355619 3503 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 ANKS1A-201ENST00000360359 6347 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 DND1-201ENST00000542735 1605 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 ZNF582-207ENST00000619584 2297 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
PUF60Q9UHX1 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC21.28■■□□□ 1
PUF60Q9UHX1 TREX2-206ENST00000370232 1864 ntTSL 1 (best) BASIC21.28■■□□□ 1
PUF60Q9UHX1 Z82202.1-201ENST00000623446 1880 ntBASIC21.28■■□□□ 1
PUF60Q9UHX1 AC007040.2-201ENST00000606025 4170 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
PUF60Q9UHX1 BCKDK-202ENST00000287507 1907 ntTSL 1 (best) BASIC21.28■■□□□ 1
PUF60Q9UHX1 CACYBP-202ENST00000405362 1059 ntTSL 5 BASIC21.28■■□□□ 1
PUF60Q9UHX1 AL954642.1-201ENST00000428088 538 ntTSL 3 BASIC21.28■■□□□ 1
PUF60Q9UHX1 ZNF534-203ENST00000432303 956 ntTSL 2 BASIC21.28■■□□□ 1
PUF60Q9UHX1 AC116562.2-201ENST00000507042 360 ntBASIC21.28■■□□□ 1
PUF60Q9UHX1 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC21.28■■□□□ 1
PUF60Q9UHX1 AC009093.4-201ENST00000567984 561 ntTSL 4 BASIC21.28■■□□□ 1
PUF60Q9UHX1 ZNF561-AS1-202ENST00000586614 568 ntTSL 5 BASIC21.28■■□□□ 1
PUF60Q9UHX1 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC21.28■■□□□ 1
PUF60Q9UHX1 GPR50-AS1-201ENST00000454196 1620 ntTSL 2 BASIC21.28■■□□□ 1
PUF60Q9UHX1 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PUF60Q9UHX1 UMOD-202ENST00000396134 2408 ntAPPRIS ALT2 TSL 2 BASIC21.28■■□□□ 1
PUF60Q9UHX1 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC21.28■■□□□ 1
PUF60Q9UHX1 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC21.28■■□□□ 1
PUF60Q9UHX1 KRT16P1-201ENST00000399124 1418 ntBASIC21.28■■□□□ 1
PUF60Q9UHX1 KRT8P9-201ENST00000558927 1449 ntBASIC21.28■■□□□ 1
PUF60Q9UHX1 ADPGK-201ENST00000311669 2557 ntAPPRIS P1 TSL 2 BASIC21.28■■□□□ 1
PUF60Q9UHX1 DHRSX-201ENST00000334651 2571 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
PUF60Q9UHX1 UBXN2A-201ENST00000309033 6066 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC21.27■■□□□ 1
PUF60Q9UHX1 KDELR3-201ENST00000216014 1728 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 KLHL17-201ENST00000338591 2560 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 AC005521.1-201ENST00000393351 872 ntBASIC21.27■■□□□ 1
PUF60Q9UHX1 LRRC20-205ENST00000395010 2959 ntTSL 3 BASIC21.27■■□□□ 1
PUF60Q9UHX1 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC21.27■■□□□ 1
PUF60Q9UHX1 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC21.27■■□□□ 1
PUF60Q9UHX1 AC098829.1-201ENST00000502344 630 ntTSL 3 BASIC21.27■■□□□ 1
PUF60Q9UHX1 RMI2-205ENST00000576027 818 ntTSL 2 BASIC21.27■■□□□ 1
PUF60Q9UHX1 IMPAD1-201ENST00000262644 7199 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 LUC7L2-210ENST00000619796 2783 ntTSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 FLCN-203ENST00000389169 1692 ntTSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
PUF60Q9UHX1 AC007613.1-201ENST00000572811 2597 ntBASIC21.27■□□□□ 0.99
PUF60Q9UHX1 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC21.27■□□□□ 0.99
PUF60Q9UHX1 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC21.27■□□□□ 0.99
PUF60Q9UHX1 MYH7B-201ENST00000262873 6293 ntAPPRIS P2 TSL 1 (best) BASIC21.27■□□□□ 0.99
PUF60Q9UHX1 MCEMP1-201ENST00000333598 1730 ntAPPRIS P2 TSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 CREG2-201ENST00000324768 6383 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 KIF22-203ENST00000561482 2505 ntTSL 2 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 LGALS9C-212ENST00000583322 1602 ntAPPRIS ALT1 TSL 5 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 GRM5-201ENST00000305432 4475 ntAPPRIS P3 TSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 DCAKD-208ENST00000614054 2054 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 CD37-204ENST00000535669 1674 ntTSL 2 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 TSPY8-201ENST00000287721 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 HIST2H2AB-201ENST00000331128 393 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 CALM3-202ENST00000391918 702 ntTSL 2 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 AC103855.2-201ENST00000533315 573 ntTSL 4 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 FITM1-202ENST00000559294 800 ntBASIC21.26■□□□□ 0.99
PUF60Q9UHX1 KANK3-205ENST00000610351 1191 ntTSL 5 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 BTBD11-201ENST00000280758 5767 ntAPPRIS P3 TSL 5 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 TMEM109-202ENST00000536171 1959 ntAPPRIS P1 TSL 2 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 MOK-225ENST00000522867 1883 ntTSL 5 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 AC093627.4-201ENST00000484550 5008 ntTSL 2 BASIC21.26■□□□□ 0.99
PUF60Q9UHX1 ETV7-206ENST00000615781 1776 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PUF60Q9UHX1 MB21D1-202ENST00000370318 1917 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PUF60Q9UHX1 HSD11B1L-204ENST00000411793 1362 ntTSL 1 (best) BASIC21.25■□□□□ 0.99
PUF60Q9UHX1 PCCA-201ENST00000376279 2418 ntTSL 2 BASIC21.25■□□□□ 0.99
PUF60Q9UHX1 CBLC-201ENST00000270279 1579 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PUF60Q9UHX1 ANKRD2-202ENST00000307518 1449 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PUF60Q9UHX1 MB21D2-201ENST00000392452 3368 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
PUF60Q9UHX1 AC113347.1-201ENST00000413321 391 ntBASIC21.25■□□□□ 0.99
Retrieved 100 of 98,524 protein–RNA pairs in 31.7 ms