Protein–RNA interactions for Protein: Q9UD57

NKX1-2, NK1 transcription factor-related protein 2, humanhuman

Predicted RBP Predictions only

Length 310 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NKX1-2Q9UD57 EXTL3-213ENST00000523149 1779 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 EPM2A-201ENST00000367519 3465 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 SMPD3-211ENST00000568373 2073 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 DNTTIP1-201ENST00000372622 1290 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 FOXB2-201ENST00000376708 1299 ntAPPRIS P1 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 AICDA-202ENST00000537228 667 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 AC243732.1-201ENST00000612648 864 ntBASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 AL358852.1-201ENST00000623174 1268 ntBASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 SPG7-201ENST00000268704 3076 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 NRP1-204ENST00000374822 2213 ntTSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 ZSCAN10-207ENST00000575108 2247 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 TSC22D3-203ENST00000372383 2266 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 MTX2-201ENST00000249442 1364 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 RBM17P2-201ENST00000616397 1405 ntBASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 BCS1L-201ENST00000359273 1454 ntAPPRIS P1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 ZNF534-201ENST00000301085 1525 ntTSL 2 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 NUDT4-202ENST00000415493 4839 ntAPPRIS ALT1 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 MATN4-201ENST00000353917 1657 ntTSL 5 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 PARP9-204ENST00000471785 3040 ntAPPRIS ALT2 TSL 2 BASIC18.12■□□□□ 0.49
NKX1-2Q9UD57 STOX1-204ENST00000399169 3281 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 RNPS1-203ENST00000397086 2069 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 TBXAS1-210ENST00000458722 2057 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 LINC01569-202ENST00000573042 2093 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 ZNF133-205ENST00000401790 2642 ntAPPRIS ALT2 TSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 CD99P1-204ENST00000435581 2788 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 GLUD1-201ENST00000277865 3039 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 PLCH2-205ENST00000449969 5450 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 LRRC3C-201ENST00000377924 891 ntAPPRIS P1 TSL 3 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 AC103702.2-201ENST00000433510 1270 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 AP002893.1-201ENST00000528885 684 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 AC011448.1-201ENST00000555938 1100 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 CFD-202ENST00000592860 809 ntAPPRIS ALT2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 RBPJL-203ENST00000372743 1623 ntAPPRIS ALT1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 FADS2-209ENST00000521849 1703 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 TMEM235-203ENST00000550981 1786 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 IFT74-203ENST00000433700 2119 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 ZGLP1-202ENST00000403903 2303 ntAPPRIS P2 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 LTF-203ENST00000426532 2494 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 SCNN1D-206ENST00000400928 2731 ntAPPRIS ALT2 TSL 5 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 MFSD11-202ENST00000355954 2832 ntTSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 AC112229.1-202ENST00000490013 2918 ntTSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 PAPD5-203ENST00000561678 2916 ntTSL 5 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 SNRK-204ENST00000454177 2961 ntAPPRIS P1 TSL 2 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 CASKIN2-201ENST00000321617 5015 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 IQSEC1-201ENST00000273221 5279 ntAPPRIS P1 TSL 1 (best) BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC18.11■□□□□ 0.49
NKX1-2Q9UD57 ELL2-201ENST00000237853 6046 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 DIDO1-203ENST00000370366 2383 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 AL118508.1-201ENST00000613502 2345 ntBASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 RELA-226ENST00000612991 2266 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 CHTOP-205ENST00000403433 1923 ntAPPRIS ALT2 TSL 5 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 ETV2-202ENST00000379026 1571 ntAPPRIS ALT2 TSL 2 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 FUZ-216ENST00000533418 1524 ntTSL 5 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 TRIR-201ENST00000242784 970 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 CTAG1B-202ENST00000359887 998 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 NUDT14-202ENST00000392568 845 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 VMO1-204ENST00000441199 741 ntTSL 2 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 AC005410.1-201ENST00000579522 462 ntTSL 3 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 TRIR-202ENST00000588213 841 ntTSL 3 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 GXYLT2-201ENST00000389617 3260 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 DNM2-201ENST00000355667 3541 ntTSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC18.1■□□□□ 0.49
NKX1-2Q9UD57 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 KLF10-201ENST00000285407 3097 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 NTRK1-202ENST00000368196 2701 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 RAN-212ENST00000543796 2661 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 ERLIN1-203ENST00000421367 5792 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 U73166.1-201ENST00000439898 2625 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 ASIC2-201ENST00000225823 3443 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 C15orf38-AP3S2-201ENST00000398333 2439 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 LINC00969-219ENST00000453324 1439 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 C19orf60-201ENST00000358607 839 ntAPPRIS P3 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 EXT2-202ENST00000358681 2997 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 AC009299.2-201ENST00000482477 511 ntBASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 AC110285.4-201ENST00000572590 424 ntTSL 3 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 TPRG1LP1-201ENST00000598702 760 ntBASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 BANP-227ENST00000626016 2144 ntTSL 2 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 C12orf29-201ENST00000356891 2919 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 RIOX2-201ENST00000333396 5347 ntAPPRIS ALT1 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 MUTYH-202ENST00000355498 1776 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 KLC1-217ENST00000554280 2426 ntTSL 5 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 FAM69C-201ENST00000343998 3671 ntAPPRIS P1 TSL 5 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 TAF1C-222ENST00000570117 2349 ntAPPRIS ALT2 TSL 2 BASIC18.09■□□□□ 0.49
NKX1-2Q9UD57 HOTTIP-202ENST00000472494 2285 ntTSL 2 BASIC18.09■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms