Protein–RNA interactions for Protein: Q9NRW7

VPS45, Vacuolar protein sorting-associated protein 45, humanhuman

Predictions only

Length 570 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VPS45Q9NRW7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 GIPR-202ENST00000304207 1432 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 AMDHD2-201ENST00000293971 1459 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 CFAP46-201ENST00000368585 1825 ntAPPRIS ALT2 TSL 2 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 BIRC2-206ENST00000530675 1927 ntTSL 2 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 KMT5C-201ENST00000255613 2308 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
VPS45Q9NRW7 SLC4A4-201ENST00000264485 5852 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 FOXL2-201ENST00000330315 2917 ntAPPRIS P1 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 SAE1-201ENST00000270225 2049 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 AC104417.2-201ENST00000562989 1793 ntBASIC19.63■□□□□ 0.73
VPS45Q9NRW7 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 NAA60-235ENST00000576916 1567 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 ICAM1-202ENST00000423829 1296 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 PPP1R14BP5-201ENST00000440334 435 ntBASIC19.63■□□□□ 0.73
VPS45Q9NRW7 CDKN2AIPNL-202ENST00000458198 1223 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 DCTN3-209ENST00000477738 713 ntTSL 3 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 KRT18P56-201ENST00000507275 550 ntBASIC19.63■□□□□ 0.73
VPS45Q9NRW7 KRT126P-201ENST00000549467 1181 ntBASIC19.63■□□□□ 0.73
VPS45Q9NRW7 SLC6A6-208ENST00000621751 1252 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 SPINK2-207ENST00000631082 392 ntTSL 5 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 TPD52-209ENST00000518937 2856 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 ISLR2-204ENST00000453268 2812 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 P2RY2-201ENST00000311131 2660 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 FDFT1-226ENST00000623368 2368 ntTSL 2 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 AC009133.6-201ENST00000609618 2252 ntAPPRIS P1 TSL 5 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 AL032819.2-201ENST00000624543 2162 ntBASIC19.63■□□□□ 0.73
VPS45Q9NRW7 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 PLD4-204ENST00000540372 2007 ntAPPRIS ALT2 TSL 2 BASIC19.63■□□□□ 0.73
VPS45Q9NRW7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 DUSP15-209ENST00000486996 1651 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 WWOX-205ENST00000539474 1670 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 HMBS-214ENST00000542729 1469 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 TBC1D9-201ENST00000442267 5306 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 SYNE4-202ENST00000340477 1004 ntAPPRIS ALT2 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 ISCU-202ENST00000392807 1069 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 MESTP1-201ENST00000404287 994 ntBASIC19.62■□□□□ 0.73
VPS45Q9NRW7 ISCU-203ENST00000431221 799 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 IMMP2L-207ENST00000452895 833 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 C1orf52-203ENST00000471115 1219 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 TOLLIP-AS1-201ENST00000530897 939 ntBASIC19.62■□□□□ 0.73
VPS45Q9NRW7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 HDAC4-201ENST00000345617 8976 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 HDAC4-215ENST00000543185 8990 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 AC087289.5-201ENST00000586076 3175 ntBASIC19.62■□□□□ 0.73
VPS45Q9NRW7 MCIDAS-201ENST00000513312 1736 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 PHKA1-204ENST00000373545 6173 ntTSL 5 BASIC19.62■□□□□ 0.73
VPS45Q9NRW7 ISOC2-203ENST00000438389 1566 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 CCDC151-201ENST00000356392 2107 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 RNF38-202ENST00000350199 5104 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 NDUFA10-214ENST00000620965 1489 ntAPPRIS ALT1 TSL 5 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 SMARCD1-201ENST00000381513 3237 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 STARD3-219ENST00000580611 1989 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 PCMT1-203ENST00000367384 1938 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 GTF3A-201ENST00000381140 1383 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 SET-201ENST00000322030 2915 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 GALNT13-201ENST00000392825 5536 ntAPPRIS P1 TSL 2 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 PODNL1-203ENST00000538371 1826 ntAPPRIS ALT2 TSL 2 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 AC115618.1-201ENST00000376775 549 ntTSL 3 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 DCTN5-208ENST00000568589 772 ntTSL 2 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 AL445675.2-201ENST00000620291 557 ntBASIC19.61■□□□□ 0.73
VPS45Q9NRW7 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 FGF17-201ENST00000359441 1714 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 ZNRF1-202ENST00000335325 4620 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 NFIX-202ENST00000360105 5459 ntTSL 5 BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 SNAPC2-201ENST00000221573 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
VPS45Q9NRW7 DSCC1-201ENST00000313655 2314 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
VPS45Q9NRW7 BTD-202ENST00000383778 2261 ntAPPRIS ALT2 TSL 2 BASIC19.6■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 26.8 ms