Protein–RNA interactions for Protein: Q9NQV7

PRDM9, Histone-lysine N-methyltransferase PRDM9, humanhuman

Predictions only

Length 894 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PRDM9Q9NQV7 KRT8P12-201ENST00000468527 998 ntTSL 2 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 PSMB5-205ENST00000493471 1117 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 AC008771.1-201ENST00000508000 1151 ntTSL 2 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 FAU-207ENST00000529639 847 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 SQSTM1-216ENST00000626660 274 ntTSL 5 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 RIMBP3-201ENST00000619918 6105 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 SLC25A3-211ENST00000548847 1369 ntTSL 5 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 AC096733.2-201ENST00000609937 1394 ntBASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 CPEB2-202ENST00000345451 2013 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 C14orf180-201ENST00000331952 1455 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 KMT5B-203ENST00000401547 2666 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 ZFP92-201ENST00000338647 6105 ntAPPRIS P1 TSL 5 BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 CRLF3-201ENST00000324238 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 GFER-201ENST00000248114 2345 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC17.99■□□□□ 0.47
PRDM9Q9NQV7 SMN1-209ENST00000514951 1308 ntTSL 2 BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 NUBP2-201ENST00000262302 1413 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 TUBA4A-202ENST00000392088 2499 ntTSL 2 BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 CAMK4-210ENST00000512453 1640 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 RAX-202ENST00000334889 3197 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 MMD2-201ENST00000401401 2335 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 BAALC-203ENST00000309982 2831 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 NDUFS6-201ENST00000274137 1082 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 PMVK-201ENST00000368467 1280 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 ACP1-205ENST00000407983 703 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 CHCHD10-202ENST00000484558 1171 ntTSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 AC091153.3-201ENST00000497885 472 ntTSL 2 BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 CYGB-204ENST00000589342 815 ntTSL 3 BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 RETREG2-203ENST00000430297 4618 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 AL161938.1-201ENST00000569833 2180 ntBASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 KLF13-201ENST00000307145 6825 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 KCTD15-202ENST00000430256 2555 ntAPPRIS P1 TSL 2 BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 CD2AP-201ENST00000359314 5412 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 SIX5-201ENST00000317578 3318 ntAPPRIS P2 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 ALG9-214ENST00000614444 2028 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 GCOM1-202ENST00000380569 1846 ntAPPRIS P3 TSL 2 BASIC17.98■□□□□ 0.47
PRDM9Q9NQV7 OLFM1-205ENST00000371796 2492 ntTSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 FAM131A-204ENST00000418281 1664 ntTSL 5 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 PIANP-201ENST00000320591 2323 ntAPPRIS P3 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 ADAMTS19-205ENST00000638972 5089 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 KRAS-201ENST00000256078 1119 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 COX5A-201ENST00000322347 1268 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 AQP12B-201ENST00000407834 1094 ntAPPRIS P2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 AL390955.1-201ENST00000428694 934 ntBASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 AC009487.1-202ENST00000437683 402 ntTSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 MFAP1P1-201ENST00000442257 1255 ntBASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 TMUB1-205ENST00000482202 899 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 YKT6-207ENST00000496112 1270 ntTSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 LINC01184-202ENST00000501173 949 ntTSL 5 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 ANK1-211ENST00000522231 1060 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 ANK1-212ENST00000522543 1160 ntTSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 RPS20-210ENST00000523936 899 ntTSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 TESMIN-209ENST00000544963 1235 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 NIFKP4-201ENST00000567275 1192 ntBASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 PHOSPHO2-206ENST00000616481 1252 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 PHOSPHO2-208ENST00000617738 1053 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 KLC2-204ENST00000394067 2898 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 CDC42EP2-201ENST00000279249 2023 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 HOXA11-AS-205ENST00000522863 1723 ntTSL 5 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 ZNF281-202ENST00000367352 2933 ntAPPRIS ALT2 TSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 SAMD11-213ENST00000618181 2179 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 SLC25A29-215ENST00000556505 1540 ntTSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 KRT8P11-201ENST00000409686 1436 ntBASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 AL445686.2-201ENST00000577528 1445 ntTSL 3 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 CCT5-214ENST00000515676 1997 ntTSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 AOC3-204ENST00000591562 2522 ntTSL 2 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 WDR37-206ENST00000620998 1303 ntTSL 5 BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 PITX2-201ENST00000306732 2320 ntAPPRIS P4 TSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 ERCC2-203ENST00000391944 2334 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
PRDM9Q9NQV7 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 PITX2-203ENST00000355080 2100 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 HSPB6-201ENST00000004982 1457 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 AUTS2-201ENST00000342771 6173 ntAPPRIS P3 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 NCF1-201ENST00000289473 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 SLC25A47-201ENST00000361529 1738 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 RIMBP3B-201ENST00000620804 6105 ntAPPRIS P1 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 GPM6B-204ENST00000398361 1033 ntTSL 2 BASIC17.96■□□□□ 0.47
PRDM9Q9NQV7 AC087499.1-201ENST00000418141 1075 ntBASIC17.96■□□□□ 0.47
Retrieved 100 of 98,524 protein–RNA pairs in 23.1 ms