Protein–RNA interactions for Protein: Q9HD90

NEUROD4, Neurogenic differentiation factor 4, humanhuman

Predictions only

Length 331 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NEUROD4Q9HD90 NDUFA8-201ENST00000373768 844 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 CALML5-201ENST00000380332 859 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 KRASP1-201ENST00000407852 552 ntBASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 YWHAZ-209ENST00000419477 891 ntAPPRIS P1 TSL 3 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 AL596275.1-201ENST00000423464 877 ntBASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TSPY10-201ENST00000428845 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 AC005056.1-201ENST00000435932 532 ntTSL 4 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TSPY3-203ENST00000457222 1161 ntAPPRIS P5 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 AL359399.1-201ENST00000557610 462 ntTSL 3 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 AC009052.1-201ENST00000567090 298 ntTSL 3 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 SUMO2-203ENST00000578238 490 ntTSL 2 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 FXYD3-214ENST00000605677 633 ntTSL 2 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TMEM191B-203ENST00000613597 366 ntAPPRIS ALT2 TSL 5 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 ACHE-205ENST00000419336 1906 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 EVPL-202ENST00000586740 6223 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 FAM198A-202ENST00000430121 3121 ntAPPRIS P2 TSL 5 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 AC008878.3-201ENST00000617428 4964 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 CDKN2C-201ENST00000262662 2904 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TEAD2-202ENST00000377214 2440 ntAPPRIS ALT1 TSL 2 BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC17.97■□□□□ 0.47
NEUROD4Q9HD90 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 HHIPL1-201ENST00000330710 7390 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 PRKCI-201ENST00000295797 4950 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 AC011944.1-201ENST00000316148 1900 ntTSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 CTBP2-214ENST00000531469 1918 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 ZKSCAN7-205ENST00000426540 2791 ntAPPRIS P1 TSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 COX7A2L-201ENST00000234301 1112 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 FAM167B-201ENST00000373582 936 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 AC133681.1-201ENST00000465482 601 ntBASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 OGFOD2-207ENST00000536150 1956 ntTSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 ZBTB33-202ENST00000557385 2346 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 ACAA1-201ENST00000301810 1540 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 FAM91A1-207ENST00000521166 2706 ntTSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 TCERG1L-201ENST00000368642 2618 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC17.96■□□□□ 0.47
NEUROD4Q9HD90 ZAR1L-202ENST00000533490 1564 ntAPPRIS P1 TSL 5 BASIC17.96■□□□□ 0.46
NEUROD4Q9HD90 CPNE7-201ENST00000268720 2657 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 SCARF2-202ENST00000622235 3232 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 ARHGAP28-203ENST00000383472 2295 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 Z98044.1-201ENST00000632503 1764 ntBASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 BMP8B-201ENST00000372827 4822 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 SERF2-207ENST00000409614 582 ntTSL 2 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 GLRB-205ENST00000512619 728 ntTSL 3 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 LY6E-205ENST00000519611 635 ntTSL 3 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 AC022167.3-201ENST00000564485 427 ntTSL 2 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 MMD2-204ENST00000612910 778 ntTSL 5 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 SLC27A3-204ENST00000368661 2410 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 KRT81-201ENST00000327741 1929 ntAPPRIS P2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 MEF2B-204ENST00000424583 1405 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 PLEKHG5-207ENST00000400913 4698 ntAPPRIS P3 TSL 5 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 TRIM73-202ENST00000430211 1321 ntAPPRIS ALT2 TSL 2 BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 WNT6-201ENST00000233948 1703 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
NEUROD4Q9HD90 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 SENP6-201ENST00000327284 2700 ntTSL 2 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 FAM3A-203ENST00000369641 1359 ntTSL 5 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 EDA-208ENST00000524573 1381 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 WT1-205ENST00000452863 2768 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 GOLGA6L5P-202ENST00000515341 1828 ntBASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 CCDC34-201ENST00000317945 2109 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 AGTRAP-203ENST00000376629 1100 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.94■□□□□ 0.46
NEUROD4Q9HD90 RTBDN-203ENST00000458671 1066 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 25.5 ms