Protein–RNA interactions for Protein: Q9H611

PIF1, ATP-dependent DNA helicase PIF1, humanhuman

Predictions only

Length 641 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PIF1Q9H611 RALGPS1-208ENST00000424082 2362 ntTSL 2 BASIC18.17■□□□□ 0.5
PIF1Q9H611 PCDHA1-202ENST00000394633 2204 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 OXSR1-201ENST00000311806 4553 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 MFF-205ENST00000354503 1085 ntTSL 2 BASIC18.17■□□□□ 0.5
PIF1Q9H611 C20orf196-202ENST00000378979 585 ntTSL 2 BASIC18.17■□□□□ 0.5
PIF1Q9H611 HAGH-201ENST00000397353 1257 ntAPPRIS ALT1 TSL 5 BASIC18.17■□□□□ 0.5
PIF1Q9H611 METTL15-202ENST00000403099 795 ntTSL 5 BASIC18.17■□□□□ 0.5
PIF1Q9H611 AC090192.1-201ENST00000517740 490 ntBASIC18.17■□□□□ 0.5
PIF1Q9H611 TK2-208ENST00000545043 1120 ntTSL 2 BASIC18.17■□□□□ 0.5
PIF1Q9H611 AC006557.6-201ENST00000623071 864 ntBASIC18.17■□□□□ 0.5
PIF1Q9H611 NAPA-210ENST00000595227 1460 ntTSL 3 BASIC18.17■□□□□ 0.5
PIF1Q9H611 R3HCC1-210ENST00000625275 1489 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 ANKRD10-201ENST00000267339 2495 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
PIF1Q9H611 HNRNPUL1-203ENST00000378215 2864 ntTSL 2 BASIC18.17■□□□□ 0.5
PIF1Q9H611 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 ADCY9-201ENST00000294016 7725 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 GIT1-203ENST00000394869 3711 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 ZNF419-201ENST00000221735 2309 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 KCNA2-206ENST00000638477 1524 ntTSL 5 BASIC18.17■□□□□ 0.5
PIF1Q9H611 UBE2E3-201ENST00000392415 1347 ntAPPRIS P1 TSL 3 BASIC18.17■□□□□ 0.5
PIF1Q9H611 PHB2-201ENST00000399433 1308 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
PIF1Q9H611 Z98044.1-201ENST00000632503 1764 ntBASIC18.17■□□□□ 0.5
PIF1Q9H611 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC18.17■□□□□ 0.5
PIF1Q9H611 SHC3-202ENST00000375835 9768 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
PIF1Q9H611 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC18.16■□□□□ 0.5
PIF1Q9H611 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 ITGA8-201ENST00000378076 6755 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 VBP1-201ENST00000286428 1686 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 RASA4B-201ENST00000306682 2589 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 PCSK5-201ENST00000376752 5756 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 HRASLS-201ENST00000264735 1066 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 SULT1A1-202ENST00000350842 1282 ntTSL 3 BASIC18.16■□□□□ 0.5
PIF1Q9H611 AIDA-202ENST00000355727 1072 ntTSL 5 BASIC18.16■□□□□ 0.5
PIF1Q9H611 FNDC11-201ENST00000370097 1119 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PIF1Q9H611 BX276092.2-201ENST00000417668 665 ntBASIC18.16■□□□□ 0.5
PIF1Q9H611 AC083906.2-201ENST00000511578 360 ntBASIC18.16■□□□□ 0.5
PIF1Q9H611 CAMLG-202ENST00000514518 895 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.16■□□□□ 0.5
PIF1Q9H611 AC105036.2-201ENST00000569468 176 ntBASIC18.16■□□□□ 0.5
PIF1Q9H611 NIPAL2-201ENST00000341166 4581 ntTSL 2 BASIC18.16■□□□□ 0.5
PIF1Q9H611 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC18.16■□□□□ 0.5
PIF1Q9H611 ASXL1-202ENST00000375687 7031 ntAPPRIS P2 TSL 5 BASIC18.16■□□□□ 0.5
PIF1Q9H611 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.16■□□□□ 0.5
PIF1Q9H611 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 SERPINF2-202ENST00000382061 2265 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC18.16■□□□□ 0.5
PIF1Q9H611 SLC25A15-201ENST00000338625 1586 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 TMEM263-204ENST00000548125 3349 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PIF1Q9H611 ZNF710-201ENST00000268154 4617 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PIF1Q9H611 IL4I1-202ENST00000391826 1863 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 PLEKHA2-206ENST00000521746 2127 ntTSL 5 BASIC18.16■□□□□ 0.5
PIF1Q9H611 KRT8-216ENST00000552551 2126 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
PIF1Q9H611 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
PIF1Q9H611 CLDN5-204ENST00000618236 1374 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
PIF1Q9H611 MMD2-202ENST00000404774 2415 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 PPP1R18-201ENST00000274853 4599 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 PPP1R18-205ENST00000615527 4597 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 KRT5-201ENST00000252242 2531 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 CMIP-209ENST00000566513 2288 ntTSL 5 BASIC18.15■□□□□ 0.5
PIF1Q9H611 PXK-206ENST00000463280 2825 ntTSL 2 BASIC18.15■□□□□ 0.5
PIF1Q9H611 TDRP-201ENST00000324079 3395 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 MKRN4P-201ENST00000444706 1521 ntBASIC18.15■□□□□ 0.5
PIF1Q9H611 BOD1L2-201ENST00000585477 3239 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PIF1Q9H611 TSG101-201ENST00000251968 1824 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 SMNDC1-201ENST00000369592 1110 ntAPPRIS P1 TSL 3 BASIC18.15■□□□□ 0.5
PIF1Q9H611 OR2A1-AS1-201ENST00000462305 773 ntBASIC18.15■□□□□ 0.5
PIF1Q9H611 AC004889.1-204ENST00000474656 773 ntTSL 3 BASIC18.15■□□□□ 0.5
PIF1Q9H611 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC18.15■□□□□ 0.5
PIF1Q9H611 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.15■□□□□ 0.5
PIF1Q9H611 EGFR-202ENST00000342916 2239 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 ATRIP-202ENST00000346691 2509 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 TRAK1-209ENST00000487159 5536 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
PIF1Q9H611 ANKRD18DP-204ENST00000455355 1975 ntBASIC18.15■□□□□ 0.5
PIF1Q9H611 AC126773.2-201ENST00000562172 1682 ntTSL 3 BASIC18.15■□□□□ 0.5
PIF1Q9H611 ADGRG2-209ENST00000379876 4779 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 BICRA-201ENST00000396720 5739 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
PIF1Q9H611 PRDM14-201ENST00000276594 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC18.15■□□□□ 0.5
PIF1Q9H611 FOXD4L6-201ENST00000622588 2034 ntAPPRIS P1 BASIC18.15■□□□□ 0.5
PIF1Q9H611 SNAI3-201ENST00000332281 1732 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 UNC119-202ENST00000335765 1424 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
PIF1Q9H611 CCAR2-214ENST00000613179 1421 ntTSL 5 BASIC18.15■□□□□ 0.5
PIF1Q9H611 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC18.14■□□□□ 0.5
PIF1Q9H611 FAM219B-204ENST00000563119 2721 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.5
PIF1Q9H611 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.5
PIF1Q9H611 DMKN-207ENST00000419602 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
PIF1Q9H611 NR4A2-204ENST00000409572 2878 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
PIF1Q9H611 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC18.14■□□□□ 0.49
PIF1Q9H611 EIF4G3-214ENST00000634879 5325 ntTSL 5 BASIC18.14■□□□□ 0.49
PIF1Q9H611 TJP3-205ENST00000587686 2946 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 PACS2-203ENST00000447393 6365 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 CYR61-201ENST00000451137 2290 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
PIF1Q9H611 AMACR-206ENST00000502637 1598 ntTSL 5 BASIC18.14■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 43 ms