Protein–RNA interactions for Protein: Q9H4P4

RNF41, E3 ubiquitin-protein ligase NRDP1, humanhuman

Predicted RBP Predictions only

Length 317 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RNF41Q9H4P4 AC015712.4-203ENST00000559673 630 ntTSL 3 BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 ZNF134-203ENST00000600344 483 ntTSL 1 (best) BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 FFAR4-203ENST00000604414 1142 ntTSL 3 BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 AC145285.6-201ENST00000604632 637 ntBASIC22.46■■□□□ 1.19
RNF41Q9H4P4 AL023803.3-201ENST00000615559 522 ntBASIC22.46■■□□□ 1.19
RNF41Q9H4P4 TMEM191A-208ENST00000450925 1961 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 LINC01568-207ENST00000641790 1380 ntBASIC22.46■■□□□ 1.19
RNF41Q9H4P4 CYGB-201ENST00000293230 2158 ntAPPRIS P1 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 MON1A-202ENST00000417270 2527 ntAPPRIS ALT2 TSL 5 BASIC22.46■■□□□ 1.19
RNF41Q9H4P4 APAF1-210ENST00000551964 5444 ntAPPRIS P4 TSL 1 (best) BASIC22.45■■□□□ 1.19
RNF41Q9H4P4 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC22.45■■□□□ 1.19
RNF41Q9H4P4 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 TSR1-201ENST00000301364 5188 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 ANK1-206ENST00000348036 622 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 SNAPIN-201ENST00000368685 1030 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 CYB561D2-204ENST00000424512 1212 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 CBLN1-202ENST00000536749 718 ntAPPRIS P1 TSL 5 BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 SLC25A11-202ENST00000544061 952 ntTSL 3 BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 AC097493.4-201ENST00000641197 219 ntBASIC22.45■■□□□ 1.18
RNF41Q9H4P4 TPSB2-203ENST00000612142 1352 ntAPPRIS P5 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 KRT8P3-201ENST00000519669 1449 ntBASIC22.45■■□□□ 1.18
RNF41Q9H4P4 IFNLR1-202ENST00000327575 1476 ntAPPRIS ALT2 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 NSMF-206ENST00000371475 2987 ntAPPRIS ALT1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 NAPRT-203ENST00000435154 1877 ntTSL 2 BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 PTGES2-AS1-201ENST00000443493 2100 ntBASIC22.45■■□□□ 1.18
RNF41Q9H4P4 SDHA-201ENST00000264932 2390 ntAPPRIS P1 TSL 1 (best) BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 OTOP3-201ENST00000328801 2363 ntAPPRIS P1 TSL 2 BASIC22.45■■□□□ 1.18
RNF41Q9H4P4 TDRP-203ENST00000523656 2622 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 DIAPH1-203ENST00000389057 5762 ntAPPRIS ALT2 TSL 5 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 ADGRA2-201ENST00000315215 6270 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 TMEM8A-204ENST00000431232 3691 ntAPPRIS P2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 SRMS-201ENST00000217188 1516 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 HOXD10-201ENST00000249501 1989 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 DISC1-202ENST00000317586 2636 ntAPPRIS ALT2 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 VKORC1-202ENST00000319788 1077 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 ZNF584-202ENST00000322834 1042 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 TMEM240-201ENST00000378733 718 ntAPPRIS P1 TSL 2 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 AC211429.1-201ENST00000415277 523 ntBASIC22.44■■□□□ 1.18
RNF41Q9H4P4 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 RAB2A-211ENST00000531289 1058 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 SLC39A1-209ENST00000537590 2022 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 AL353719.1-201ENST00000566847 864 ntBASIC22.44■■□□□ 1.18
RNF41Q9H4P4 AC012306.2-201ENST00000609350 630 ntBASIC22.44■■□□□ 1.18
RNF41Q9H4P4 C15orf56-202ENST00000623360 2129 ntTSL 2 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 ZIM2-208ENST00000629319 2253 ntAPPRIS P1 TSL 5 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 RASEF-202ENST00000376447 5576 ntAPPRIS P1 TSL 1 (best) BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 PDE4DIP-214ENST00000479408 2746 ntTSL 5 BASIC22.44■■□□□ 1.18
RNF41Q9H4P4 FBLN7-202ENST00000331203 2301 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 AC092338.2-201ENST00000568827 1415 ntBASIC22.43■■□□□ 1.18
RNF41Q9H4P4 UHRF1-203ENST00000615884 2651 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 KRT18P22-201ENST00000402024 1347 ntBASIC22.43■■□□□ 1.18
RNF41Q9H4P4 JAKMIP1-201ENST00000282924 2585 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 HOXD12-201ENST00000404162 841 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 CHCHD6-204ENST00000508789 1159 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 ARL16-209ENST00000573715 763 ntTSL 3 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 ARL16-211ENST00000576135 694 ntTSL 3 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 AC100793.2-201ENST00000593139 542 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 AC006942.1-201ENST00000600669 520 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 LINC01023-201ENST00000606054 436 ntBASIC22.43■■□□□ 1.18
RNF41Q9H4P4 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 MARK1-203ENST00000402574 5273 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 ATF5-201ENST00000423777 2069 ntAPPRIS P1 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 DISC1-215ENST00000602281 2761 ntAPPRIS ALT2 TSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 SYNDIG1L-201ENST00000331628 2607 ntAPPRIS P1 TSL 5 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 PRRT1-202ENST00000375150 1726 ntTSL 1 (best) BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 PPP1R3F-201ENST00000055335 3421 ntAPPRIS P1 TSL 2 BASIC22.43■■□□□ 1.18
RNF41Q9H4P4 HS3ST4-201ENST00000331351 3203 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 LGI3-202ENST00000424267 3114 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 C2orf81-201ENST00000290390 2227 ntAPPRIS P5 TSL 5 BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 CENPA-202ENST00000335756 1452 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 AL161938.1-201ENST00000569833 2180 ntBASIC22.42■■□□□ 1.18
RNF41Q9H4P4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 AVL9-209ENST00000640103 1367 ntTSL 5 BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC22.42■■□□□ 1.18
RNF41Q9H4P4 TSPY1-201ENST00000423647 1171 ntAPPRIS ALT2 TSL 1 (best) BASIC22.42■■□□□ 1.18
Retrieved 100 of 98,524 protein–RNA pairs in 23.8 ms