Protein–RNA interactions for Protein: Q9H254

SPTBN4, Spectrin beta chain, non-erythrocytic 4, humanhuman

Predictions only

Length 2,564 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SPTBN4Q9H254 BOLA1-202ENST00000369152 859 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 C6orf48-207ENST00000375642 962 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 AFG3L1P-209ENST00000429663 458 ntTSL 3 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 EEF1AKMT3-204ENST00000551420 836 ntTSL 2 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 RHCE-204ENST00000349320 1810 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 SLC35G2-202ENST00000446465 2060 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 FXYD3-203ENST00000435734 1467 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 KRT8P3-201ENST00000519669 1449 ntBASIC18.17■□□□□ 0.5
SPTBN4Q9H254 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 ZNF7-201ENST00000325217 592 ntTSL 4 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 FLJ20021-201ENST00000527564 790 ntTSL 2 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 AC139749.1-201ENST00000534584 1094 ntTSL 3 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 SERF2-217ENST00000630046 862 ntTSL 5 BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 TXNRD2-202ENST00000400518 2025 ntAPPRIS ALT2 TSL 1 (best) BASIC18.17■□□□□ 0.5
SPTBN4Q9H254 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 SDF4-201ENST00000263741 2079 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 MCCD1P2-201ENST00000423228 335 ntBASIC18.16■□□□□ 0.5
SPTBN4Q9H254 LMF1-202ENST00000543238 2103 ntTSL 2 BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 TNFRSF19-202ENST00000382258 1625 ntAPPRIS P4 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 CCS-201ENST00000310190 942 ntTSL 5 BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 NAA60-217ENST00000572942 1089 ntTSL 2 BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 RITA1-202ENST00000549621 2041 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 DPH1-203ENST00000570477 1747 ntAPPRIS ALT2 TSL 2 BASIC18.16■□□□□ 0.5
SPTBN4Q9H254 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 TECR-201ENST00000215567 1171 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 AL162231.1-204ENST00000423809 477 ntAPPRIS ALT2 TSL 3 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 ITGA9-AS1-209ENST00000450990 562 ntTSL 4 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 LINC00237-202ENST00000455890 1220 ntTSL 2 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 CTDNEP1-207ENST00000572043 857 ntTSL 3 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 INO80C-206ENST00000586489 594 ntTSL 3 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 ZNF773-202ENST00000593916 548 ntTSL 3 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 Z83851.2-201ENST00000609564 659 ntBASIC18.15■□□□□ 0.5
SPTBN4Q9H254 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 P2RY11-201ENST00000321826 1943 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 RABEPK-206ENST00000628863 1537 ntTSL 5 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 DAPK2-205ENST00000558069 1473 ntTSL 5 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 ARMC12-201ENST00000288065 1169 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 ATP5G3-202ENST00000392541 842 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 GSAP-205ENST00000430584 600 ntTSL 5 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 PTGES3-205ENST00000456859 957 ntTSL 2 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 MRFAP1-203ENST00000507420 563 ntAPPRIS P1 TSL 4 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 AC005332.3-201ENST00000589904 676 ntBASIC18.15■□□□□ 0.5
SPTBN4Q9H254 AC093512.1-201ENST00000617969 520 ntBASIC18.15■□□□□ 0.5
SPTBN4Q9H254 AJ011932.1-201ENST00000621707 465 ntBASIC18.15■□□□□ 0.5
SPTBN4Q9H254 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 CFP-203ENST00000396992 1592 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 ESYT3-201ENST00000289135 1356 ntTSL 5 BASIC18.15■□□□□ 0.5
SPTBN4Q9H254 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.14■□□□□ 0.5
SPTBN4Q9H254 PCSK6-220ENST00000622483 3132 ntAPPRIS ALT2 TSL 1 (best) BASIC18.14■□□□□ 0.5
SPTBN4Q9H254 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 AC007967.2-201ENST00000432613 625 ntBASIC18.14■□□□□ 0.49
SPTBN4Q9H254 EHMT1-216ENST00000493484 1182 ntTSL 3 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 GCHFR-204ENST00000559445 626 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 AC124864.1-201ENST00000623408 392 ntBASIC18.14■□□□□ 0.49
SPTBN4Q9H254 AC005906.2-202ENST00000638821 2168 ntTSL 5 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 HOXB8-201ENST00000239144 1823 ntAPPRIS P2 TSL 2 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 CLEC14A-201ENST00000342213 2267 ntAPPRIS P1 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 SNX10-207ENST00000446848 2613 ntAPPRIS P2 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 MATK-215ENST00000619596 1740 ntAPPRIS P4 TSL 2 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 RNF19B-202ENST00000356990 2598 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 PIP4K2A-206ENST00000545335 1436 ntTSL 2 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 PABPC1L-204ENST00000255136 2129 ntAPPRIS P1 TSL 5 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 HIST2H3DP1-201ENST00000401004 416 ntBASIC18.14■□□□□ 0.49
SPTBN4Q9H254 YBX1P5-201ENST00000509441 847 ntBASIC18.14■□□□□ 0.49
SPTBN4Q9H254 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 SELENOH-206ENST00000622257 1291 ntAPPRIS ALT1 TSL 5 BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 OSR1-201ENST00000272223 1936 ntAPPRIS P1 TSL 1 (best) BASIC18.14■□□□□ 0.49
SPTBN4Q9H254 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 COX14-202ENST00000548985 677 ntAPPRIS P1 TSL 2 BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 AP002472.1-201ENST00000577490 586 ntBASIC18.13■□□□□ 0.49
SPTBN4Q9H254 MIR6752-201ENST00000618442 71 ntBASIC18.13■□□□□ 0.49
SPTBN4Q9H254 CCK-202ENST00000396169 1527 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 PCYT2-201ENST00000331285 2147 ntTSL 2 BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 DUSP26-203ENST00000523956 1373 ntAPPRIS P1 TSL 5 BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 SH2B2-202ENST00000536178 2113 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 LCAT-201ENST00000264005 1507 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 SCRN2-201ENST00000290216 1548 ntAPPRIS P1 TSL 1 (best) BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 AC132008.2-207ENST00000454517 770 ntBASIC18.13■□□□□ 0.49
SPTBN4Q9H254 RNA5SP416-201ENST00000516838 111 ntBASIC18.13■□□□□ 0.49
SPTBN4Q9H254 TPD52L1-211ENST00000532429 1022 ntTSL 2 BASIC18.13■□□□□ 0.49
SPTBN4Q9H254 AL008721.1-201ENST00000609964 604 ntBASIC18.13■□□□□ 0.49
Retrieved 100 of 98,524 protein–RNA pairs in 19.6 ms