Protein–RNA interactions for Protein: Q9BTN0

LRFN3, Leucine-rich repeat and fibronectin type-III domain-containing protein 3, humanhuman

Predictions only

Length 628 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LRFN3Q9BTN0 AC092474.2-201ENST00000424288 719 ntBASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 SLC26A4-AS1-202ENST00000449741 586 ntTSL 4 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 AL445472.1-201ENST00000452532 1007 ntTSL 2 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 FGFR3P6-201ENST00000457012 610 ntBASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 HS6ST1P1-201ENST00000481504 1234 ntBASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 RNA5SP415-201ENST00000517246 115 ntBASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 C17orf49-203ENST00000546760 764 ntTSL 5 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 LINC01413-201ENST00000564843 772 ntTSL 3 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 LINC00668-203ENST00000579012 605 ntTSL 3 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 GPR32P1-201ENST00000601788 811 ntBASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 AC004130.1-202ENST00000603156 666 ntTSL 2 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 SWI5-206ENST00000608796 906 ntAPPRIS ALT2 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 HMGN3-203ENST00000620514 1010 ntTSL 3 BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 GBX2-201ENST00000306318 2123 ntAPPRIS P1 TSL 1 (best) BASIC19.01■□□□□ 0.63
LRFN3Q9BTN0 FICD-201ENST00000361549 1816 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 PLK5-202ENST00000454744 1930 ntAPPRIS P2 TSL 2 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 CNEP1R1-202ENST00000427478 2117 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 CLIC1-208ENST00000375784 1254 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 AC023274.1-201ENST00000418278 595 ntBASIC19■□□□□ 0.63
LRFN3Q9BTN0 KRT18P23-201ENST00000435622 1283 ntBASIC19■□□□□ 0.63
LRFN3Q9BTN0 AC092910.1-201ENST00000482027 1129 ntBASIC19■□□□□ 0.63
LRFN3Q9BTN0 CFL1-202ENST00000524553 860 ntTSL 2 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 AC069503.2-201ENST00000546333 576 ntAPPRIS P1 TSL 5 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 GREM1-201ENST00000560677 623 ntTSL 4 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 AC009061.1-201ENST00000567261 475 ntTSL 3 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 BNIP3P18-201ENST00000593976 575 ntBASIC19■□□□□ 0.63
LRFN3Q9BTN0 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 ZFYVE21-202ENST00000311141 1383 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 KRT13-208ENST00000587544 1456 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 DPP3P2-201ENST00000416030 1696 ntBASIC19■□□□□ 0.63
LRFN3Q9BTN0 ST3GAL4-201ENST00000227495 1790 ntAPPRIS P3 TSL 5 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 STXBP2-201ENST00000221283 1876 ntAPPRIS P3 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 ASPSCR1-201ENST00000306729 2123 ntAPPRIS ALT2 TSL 2 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 AC023830.1-201ENST00000569678 1543 ntTSL 2 BASIC19■□□□□ 0.63
LRFN3Q9BTN0 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19■□□□□ 0.63
LRFN3Q9BTN0 AC233280.1-201ENST00000423600 1684 ntTSL 2 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 PARN-205ENST00000539279 1557 ntTSL 2 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 DISP3-202ENST00000304391 1495 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 RALB-201ENST00000272519 2344 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 IRF9-203ENST00000557894 1391 ntTSL 5 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 CGREF1-201ENST00000260595 1177 ntAPPRIS ALT2 TSL 5 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 IFT20-202ENST00000357896 974 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 GK-202ENST00000378941 458 ntTSL 3 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 MRPL23-201ENST00000381514 919 ntTSL 3 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 TAF8-206ENST00000472818 719 ntTSL 2 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 AP005717.1-202ENST00000523563 419 ntTSL 3 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 GMDS-AS1-205ENST00000529893 900 ntTSL 5 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 FAM57A-205ENST00000572018 373 ntTSL 3 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 AP002472.1-201ENST00000577490 586 ntBASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 ELOF1-204ENST00000587806 1172 ntTSL 2 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 AL096865.1-201ENST00000606796 927 ntBASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 AL035252.4-201ENST00000624174 288 ntBASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 SPN-202ENST00000395389 1935 ntAPPRIS P2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 PARD3-209ENST00000374790 5825 ntTSL 5 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 PCDH1-204ENST00000503492 2373 ntTSL 5 BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 RUBCN-206ENST00000449205 1603 ntTSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 TATDN2-201ENST00000287652 5342 ntAPPRIS P1 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 AC005229.4-201ENST00000610085 2198 ntBASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 ARNTL2-204ENST00000395901 1954 ntAPPRIS ALT2 TSL 1 (best) BASIC18.99■□□□□ 0.63
LRFN3Q9BTN0 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 GPR42-201ENST00000454971 1804 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 CD244-202ENST00000368033 1360 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 AC005329.3-201ENST00000626781 1366 ntTSL 5 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 PTPN2-202ENST00000327283 1706 ntAPPRIS P1 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 MFSD13A-202ENST00000369931 823 ntTSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 APCDD1L-AS1-201ENST00000420279 555 ntTSL 5 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 AC005034.1-201ENST00000426657 489 ntBASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 BPHL-208ENST00000434640 1186 ntTSL 5 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 BCRP1-201ENST00000444246 691 ntBASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 SFTPC-210ENST00000524255 681 ntTSL 2 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 AP001269.4-201ENST00000609611 512 ntBASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 CCDC63-202ENST00000545036 1887 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 SLC39A14-202ENST00000289952 2137 ntAPPRIS ALT2 TSL 2 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 NAAA-201ENST00000286733 1900 ntAPPRIS P2 TSL 5 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 SERHL2-203ENST00000340239 1315 ntTSL 5 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 SDK1-201ENST00000389531 7606 ntAPPRIS ALT2 TSL 5 BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 NRXN2-204ENST00000377559 6413 ntAPPRIS ALT2 TSL 1 (best) BASIC18.98■□□□□ 0.63
LRFN3Q9BTN0 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 CXCL14-201ENST00000337225 1971 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 DHRS4L2-201ENST00000335125 1370 ntAPPRIS P2 TSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 BIN1-205ENST00000351659 2365 ntTSL 1 (best) BASIC18.97■□□□□ 0.63
LRFN3Q9BTN0 AL121603.2-201ENST00000557373 2117 ntBASIC18.97■□□□□ 0.63
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms