Protein–RNA interactions for Protein: Q9BSE4

HERPUD2, Homocysteine-responsive endoplasmic reticulum-resident ubiquitin-like domain member 2 protein, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD2Q9BSE4 TBX20-201ENST00000408931 1871 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 AC090164.3-201ENST00000610780 2143 ntBASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 RPS6KA1-204ENST00000374168 3186 ntAPPRIS P1 TSL 1 (best) BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC19.75■□□□□ 0.75
HERPUD2Q9BSE4 ZNF274-203ENST00000424679 2539 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 CRHR2-207ENST00000471646 2530 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 C19orf66-209ENST00000591813 1481 ntAPPRIS ALT2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 KIF1BP-204ENST00000626493 2337 ntTSL 5 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 BSG-201ENST00000333511 1974 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 MPZ-206ENST00000533357 1955 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 MTMR12-201ENST00000264934 2215 ntTSL 2 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 KRT86-202ENST00000423955 2217 ntAPPRIS P1 TSL 2 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 KRASP1-201ENST00000407852 552 ntBASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 MIR381HG-201ENST00000553692 425 ntTSL 3 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 AC140479.4-201ENST00000561715 463 ntTSL 4 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 MMD2-204ENST00000612910 778 ntTSL 5 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 CROCCP4-202ENST00000633627 573 ntTSL 3 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 CD72-201ENST00000259633 1548 ntAPPRIS P2 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 ACTR3B-203ENST00000397282 1692 ntTSL 2 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 SIKE1-201ENST00000060969 2190 ntAPPRIS P3 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 PKMYT1-203ENST00000431515 2308 ntTSL 2 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 HEXDC-203ENST00000577944 1820 ntTSL 5 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.74■□□□□ 0.75
HERPUD2Q9BSE4 NUTM2F-202ENST00000341207 2516 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 NUTM2G-202ENST00000372322 2516 ntAPPRIS ALT2 TSL 5 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 TEKT5-201ENST00000283025 1612 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 SNN-201ENST00000329565 3312 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 BANP-202ENST00000355022 2164 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 DOK7-201ENST00000340083 2562 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 DOK7-203ENST00000507039 2551 ntTSL 2 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 ACOT8-201ENST00000217455 1168 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 PRSS57-201ENST00000329267 1025 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 TSPY21P-201ENST00000433481 731 ntBASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 LY6E-205ENST00000519611 635 ntTSL 3 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 LY6E-212ENST00000522024 868 ntAPPRIS P2 TSL 5 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 SIVA1-203ENST00000535554 1244 ntAPPRIS ALT1 TSL 2 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 PRSS57-202ENST00000613411 1090 ntAPPRIS P3 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 SLCO4A1-201ENST00000217159 2776 ntAPPRIS P1 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 UNG-202ENST00000336865 2130 ntAPPRIS ALT2 TSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 CNOT9-209ENST00000627282 1621 ntTSL 2 BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 CCNJL-203ENST00000393977 3320 ntTSL 1 (best) BASIC19.73■□□□□ 0.75
HERPUD2Q9BSE4 SEC14L2-215ENST00000617837 2632 ntTSL 2 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 SAMD11-210ENST00000616016 2391 ntTSL 5 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 SAMD11-215ENST00000618779 2368 ntAPPRIS ALT2 TSL 5 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 SERGEF-201ENST00000265965 1566 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 AC007405.3-201ENST00000429172 561 ntTSL 3 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 HDAC11-221ENST00000522202 1559 ntAPPRIS ALT2 TSL 2 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 C14orf144-202ENST00000555282 854 ntTSL 3 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 BCL2L10-202ENST00000561198 825 ntAPPRIS ALT2 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 ELAC1-203ENST00000588577 694 ntTSL 2 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 SAMD11-216ENST00000620200 1874 ntTSL 5 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 AC135050.7-201ENST00000624508 2218 ntBASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 TP53I3-202ENST00000335934 1635 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 BACE1-203ENST00000428381 1333 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 COMP-202ENST00000425807 2292 ntTSL 2 BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC19.72■□□□□ 0.75
HERPUD2Q9BSE4 CEMP1-202ENST00000567119 1374 ntAPPRIS P2 BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 THOC6-209ENST00000575576 1360 ntTSL 5 BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 HBEGF-201ENST00000230990 2386 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 GABBR1-202ENST00000376977 1739 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 SNX8-201ENST00000222990 4727 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 ZNF692-204ENST00000451251 2065 ntAPPRIS ALT2 TSL 2 BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 AC020922.1-201ENST00000591954 3058 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 MFSD10-202ENST00000355443 1753 ntAPPRIS P1 TSL 1 (best) BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 PRDX1-201ENST00000262746 1234 ntAPPRIS P1 TSL 5 BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 LRRC75A-AS1-205ENST00000475953 1201 ntTSL 1 (best) BASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 AC004264.1-201ENST00000608354 794 ntBASIC19.71■□□□□ 0.75
HERPUD2Q9BSE4 AC124016.1-201ENST00000609552 612 ntBASIC19.71■□□□□ 0.75
Retrieved 100 of 98,524 protein–RNA pairs in 31.3 ms