Protein–RNA interactions for Protein: Q99732

LITAF, Lipopolysaccharide-induced tumor necrosis factor-alpha factor, humanhuman

Predictions only

Length 161 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
LITAFQ99732 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 AC135279.3-201ENST00000610945 1311 ntBASIC12.69□□□□□ -0.38
LITAFQ99732 CDC123-201ENST00000281141 1542 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 FOXE1-201ENST00000375123 3462 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LITAFQ99732 NUDT9-201ENST00000302174 1701 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 MSI2-203ENST00000416426 1714 ntTSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 PLEKHG5-201ENST00000340850 4715 ntAPPRIS P3 TSL 5 BASIC12.69□□□□□ -0.38
LITAFQ99732 PLEKHG5-211ENST00000535355 4725 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 ISM1-201ENST00000262487 2593 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LITAFQ99732 RBP4-201ENST00000371464 1068 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 RALB-203ENST00000420510 1252 ntAPPRIS P1 TSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 LINC01574-201ENST00000512115 560 ntTSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 HAUS7-211ENST00000626181 414 ntAPPRIS ALT2 TSL 5 BASIC12.69□□□□□ -0.38
LITAFQ99732 GPR137-201ENST00000313074 1485 ntTSL 5 BASIC12.69□□□□□ -0.38
LITAFQ99732 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 GPR137-203ENST00000411458 1495 ntTSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC12.69□□□□□ -0.38
LITAFQ99732 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 NOL4L-205ENST00000375678 2042 ntAPPRIS ALT2 TSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 AC079922.2-201ENST00000457336 2022 ntTSL 2 BASIC12.69□□□□□ -0.38
LITAFQ99732 HASPIN-201ENST00000325418 2797 ntAPPRIS P1 BASIC12.69□□□□□ -0.38
LITAFQ99732 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC12.69□□□□□ -0.38
LITAFQ99732 MAP4K2-202ENST00000377350 2931 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 POLR1D-221ENST00000637180 2262 ntTSL 5 BASIC12.68□□□□□ -0.38
LITAFQ99732 SLC30A5-201ENST00000380860 1317 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 PARP12-201ENST00000263549 3796 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 HCK-202ENST00000375852 2082 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC12.68□□□□□ -0.38
LITAFQ99732 GPAT3-202ENST00000395226 2631 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 EVI5L-202ENST00000538904 2418 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 MAPKAP1-208ENST00000394063 2977 ntTSL 5 BASIC12.68□□□□□ -0.38
LITAFQ99732 PSMG4-209ENST00000473000 4603 ntTSL 2 BASIC12.68□□□□□ -0.38
LITAFQ99732 PCDHGC5-202ENST00000610789 2763 ntAPPRIS ALT2 BASIC12.68□□□□□ -0.38
LITAFQ99732 DCPS-201ENST00000263579 1479 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 MBD3-201ENST00000156825 5518 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 ARAP1-AS2-201ENST00000500163 1824 ntTSL 2 BASIC12.68□□□□□ -0.38
LITAFQ99732 FNDC3B-204ENST00000421757 946 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 CDKN2A-206ENST00000494262 989 ntTSL 3 BASIC12.68□□□□□ -0.38
LITAFQ99732 AC023632.3-201ENST00000521633 145 ntBASIC12.68□□□□□ -0.38
LITAFQ99732 ZNF623-201ENST00000458270 2733 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 ANKRD18DP-204ENST00000455355 1975 ntBASIC12.68□□□□□ -0.38
LITAFQ99732 QPCTL-201ENST00000012049 2310 ntAPPRIS P1 TSL 2 BASIC12.68□□□□□ -0.38
LITAFQ99732 THOP1-201ENST00000307741 4804 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 MOCS2-202ENST00000396954 1785 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 NARFL-201ENST00000251588 2112 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 ACTN4-202ENST00000390009 2102 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 RBPJL-201ENST00000343694 2489 ntAPPRIS P3 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 PARVG-206ENST00000444313 3523 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 RILPL2-201ENST00000280571 6141 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC12.68□□□□□ -0.38
LITAFQ99732 AD000864.1-201ENST00000624076 2295 ntBASIC12.68□□□□□ -0.38
LITAFQ99732 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 FGFR4-202ENST00000393637 2418 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 MOGS-205ENST00000452063 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 PRR18-201ENST00000322583 3084 ntAPPRIS P2 BASIC12.68□□□□□ -0.38
LITAFQ99732 SULT1A1-204ENST00000395609 1871 ntAPPRIS P1 TSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 DIP2A-205ENST00000466639 2711 ntTSL 1 (best) BASIC12.68□□□□□ -0.38
LITAFQ99732 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC12.67□□□□□ -0.38
LITAFQ99732 ACAP1-201ENST00000158762 2512 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 DHCR7-201ENST00000355527 2666 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 LINC00454-202ENST00000430978 1327 ntTSL 5 BASIC12.67□□□□□ -0.38
LITAFQ99732 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 GOLGA4-208ENST00000444882 1451 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 SNX2-213ENST00000514949 2119 ntTSL 2 BASIC12.67□□□□□ -0.38
LITAFQ99732 ACBD3-201ENST00000366812 3573 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 EWSR1-222ENST00000629659 2446 ntTSL 5 BASIC12.67□□□□□ -0.38
LITAFQ99732 CCDC154-202ENST00000409671 2561 ntAPPRIS ALT2 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 AC011474.1-201ENST00000582581 2582 ntTSL 2 BASIC12.67□□□□□ -0.38
LITAFQ99732 PPP2R5B-201ENST00000164133 2745 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 C1orf56-201ENST00000368926 2096 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 SNAI3-AS1-205ENST00000568633 2096 ntBASIC12.67□□□□□ -0.38
LITAFQ99732 C5orf38-201ENST00000334000 890 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 AC093620.1-201ENST00000342963 583 ntTSL 3 BASIC12.67□□□□□ -0.38
LITAFQ99732 PHLDA3-201ENST00000367309 896 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
LITAFQ99732 FAM160B1-201ENST00000369246 666 ntTSL 2 BASIC12.67□□□□□ -0.38
LITAFQ99732 MAP1LC3A-202ENST00000374837 961 ntTSL 3 BASIC12.67□□□□□ -0.38
LITAFQ99732 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC12.67□□□□□ -0.38
LITAFQ99732 INTS11-205ENST00000429572 1104 ntTSL 2 BASIC12.67□□□□□ -0.38
LITAFQ99732 AP002748.1-201ENST00000504911 580 ntTSL 3 BASIC12.67□□□□□ -0.38
LITAFQ99732 AC105001.1-201ENST00000506149 821 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 TIE1-210ENST00000538015 1140 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 AL137779.2-201ENST00000554859 448 ntTSL 2 BASIC12.67□□□□□ -0.38
LITAFQ99732 AC145207.2-202ENST00000576554 565 ntTSL 5 BASIC12.67□□□□□ -0.38
LITAFQ99732 AC104564.5-201ENST00000584986 278 ntTSL 3 BASIC12.67□□□□□ -0.38
LITAFQ99732 MAG-206ENST00000597035 542 ntTSL 4 BASIC12.67□□□□□ -0.38
LITAFQ99732 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 PP7080-201ENST00000342584 1876 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 DTX2-201ENST00000324432 2769 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 ZNF589-203ENST00000427617 1677 ntTSL 2 BASIC12.67□□□□□ -0.38
LITAFQ99732 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 AC138028.4-201ENST00000564984 1845 ntBASIC12.67□□□□□ -0.38
LITAFQ99732 ZBTB32-201ENST00000262630 1960 ntAPPRIS P1 TSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 TBC1D2-202ENST00000375063 2100 ntTSL 1 (best) BASIC12.67□□□□□ -0.38
LITAFQ99732 MSLNL-201ENST00000442466 2109 ntAPPRIS P1 TSL 5 BASIC12.67□□□□□ -0.38
Retrieved 100 of 98,524 protein–RNA pairs in 17.8 ms