Protein–RNA interactions for Protein: Q99626

CDX2, Homeobox protein CDX-2, humanhuman

Predicted RBP Predictions only

Length 313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CDX2Q99626 ST3GAL3-239ENST00000545417 1667 ntTSL 5 BASIC19.94■□□□□ 0.78
CDX2Q99626 PLIN2-201ENST00000276914 1972 ntAPPRIS P1 TSL 1 (best) BASIC19.94■□□□□ 0.78
CDX2Q99626 PLK5-205ENST00000642079 1969 ntBASIC19.94■□□□□ 0.78
CDX2Q99626 POMC-204ENST00000405623 1426 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX2Q99626 UBE2E1-201ENST00000306627 1511 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX2Q99626 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDX2Q99626 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC19.93■□□□□ 0.78
CDX2Q99626 KRTAP1-1-201ENST00000306271 903 ntAPPRIS P1 BASIC19.93■□□□□ 0.78
CDX2Q99626 PIGU-202ENST00000374820 1248 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX2Q99626 CST3-201ENST00000376925 873 ntAPPRIS P1 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX2Q99626 KRT18P23-201ENST00000435622 1283 ntBASIC19.93■□□□□ 0.78
CDX2Q99626 METTL21AP1-201ENST00000438852 635 ntBASIC19.93■□□□□ 0.78
CDX2Q99626 KRT18P3-201ENST00000451602 1288 ntBASIC19.93■□□□□ 0.78
CDX2Q99626 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC19.93■□□□□ 0.78
CDX2Q99626 LAT-209ENST00000564277 921 ntAPPRIS ALT2 TSL 5 BASIC19.93■□□□□ 0.78
CDX2Q99626 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC19.93■□□□□ 0.78
CDX2Q99626 LGALS12-201ENST00000255684 1667 ntAPPRIS ALT2 TSL 1 (best) BASIC19.93■□□□□ 0.78
CDX2Q99626 WDR45-205ENST00000376358 1432 ntTSL 2 BASIC19.93■□□□□ 0.78
CDX2Q99626 AL024507.2-201ENST00000606070 2574 ntBASIC19.92■□□□□ 0.78
CDX2Q99626 NAT6-204ENST00000443094 1464 ntAPPRIS ALT2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX2Q99626 CHST8-202ENST00000434302 2225 ntAPPRIS P1 TSL 2 BASIC19.92■□□□□ 0.78
CDX2Q99626 AC244015.2-201ENST00000616358 1861 ntBASIC19.92■□□□□ 0.78
CDX2Q99626 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDX2Q99626 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX2Q99626 CAMK2B-203ENST00000347193 1577 ntTSL 1 (best) BASIC19.92■□□□□ 0.78
CDX2Q99626 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX2Q99626 GIT1-210ENST00000579937 2798 ntTSL 2 BASIC19.92■□□□□ 0.78
CDX2Q99626 TERT-206ENST00000508104 2486 ntTSL 5 BASIC19.92■□□□□ 0.78
CDX2Q99626 DEAF1-201ENST00000382409 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX2Q99626 C6orf99-202ENST00000367073 769 ntTSL 5 BASIC19.92■□□□□ 0.78
CDX2Q99626 AC132008.2-207ENST00000454517 770 ntBASIC19.92■□□□□ 0.78
CDX2Q99626 AC040169.1-201ENST00000565382 521 ntBASIC19.92■□□□□ 0.78
CDX2Q99626 AC130456.4-201ENST00000568635 665 ntTSL 2 BASIC19.92■□□□□ 0.78
CDX2Q99626 ARMC7-203ENST00000581078 1002 ntTSL 2 BASIC19.92■□□□□ 0.78
CDX2Q99626 LDHAL6A-203ENST00000615355 1042 ntTSL 5 BASIC19.92■□□□□ 0.78
CDX2Q99626 FAM25C-201ENST00000617224 319 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX2Q99626 FOXP3-201ENST00000376197 1326 ntTSL 2 BASIC19.92■□□□□ 0.78
CDX2Q99626 TMEM165-201ENST00000381334 1928 ntAPPRIS P1 TSL 1 (best) BASIC19.92■□□□□ 0.78
CDX2Q99626 ERF-202ENST00000440177 2032 ntTSL 2 BASIC19.92■□□□□ 0.78
CDX2Q99626 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 AP5S1-202ENST00000379567 1791 ntAPPRIS P1 TSL 2 BASIC19.91■□□□□ 0.78
CDX2Q99626 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 IRX4-202ENST00000505790 2538 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 LCE1B-201ENST00000360090 1139 ntAPPRIS P1 BASIC19.91■□□□□ 0.78
CDX2Q99626 MRPS24-203ENST00000418740 743 ntTSL 2 BASIC19.91■□□□□ 0.78
CDX2Q99626 MCCD1P1-208ENST00000445732 328 ntBASIC19.91■□□□□ 0.78
CDX2Q99626 LINC01615-202ENST00000449466 603 ntTSL 3 BASIC19.91■□□□□ 0.78
CDX2Q99626 TMUB1-204ENST00000476627 882 ntAPPRIS P1 TSL 3 BASIC19.91■□□□□ 0.78
CDX2Q99626 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC19.91■□□□□ 0.78
CDX2Q99626 COX18-204ENST00000507544 1086 ntAPPRIS ALT1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 AC034105.1-201ENST00000563488 319 ntBASIC19.91■□□□□ 0.78
CDX2Q99626 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 HSP90B1-210ENST00000614327 1338 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 HDAC11-211ENST00000433119 2043 ntTSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 ITGB1BP1-203ENST00000359712 2126 ntTSL 2 BASIC19.91■□□□□ 0.78
CDX2Q99626 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 EHBP1L1-201ENST00000309295 5185 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC19.91■□□□□ 0.78
CDX2Q99626 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC19.9■□□□□ 0.78
CDX2Q99626 BCKDK-203ENST00000394950 1997 ntTSL 2 BASIC19.9■□□□□ 0.78
CDX2Q99626 CPNE9-203ENST00000383832 2068 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDX2Q99626 NRG2-201ENST00000289409 2535 ntAPPRIS ALT2 TSL 5 BASIC19.9■□□□□ 0.78
CDX2Q99626 MSANTD3-201ENST00000374885 786 ntTSL 2 BASIC19.9■□□□□ 0.78
CDX2Q99626 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC19.9■□□□□ 0.78
CDX2Q99626 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX2Q99626 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX2Q99626 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX2Q99626 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC19.9■□□□□ 0.78
CDX2Q99626 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC19.9■□□□□ 0.78
CDX2Q99626 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX2Q99626 SPIRE2-202ENST00000393062 2172 ntAPPRIS ALT2 TSL 1 (best) BASIC19.9■□□□□ 0.78
CDX2Q99626 Z98882.1-201ENST00000622160 2253 ntBASIC19.9■□□□□ 0.78
CDX2Q99626 SCT-201ENST00000176195 366 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX2Q99626 DGUOK-201ENST00000264093 1144 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX2Q99626 CLEC1B-201ENST00000298527 952 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX2Q99626 UNC119-201ENST00000301032 1653 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDX2Q99626 HIST2H3D-201ENST00000331491 411 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDX2Q99626 DGUOK-202ENST00000348222 880 ntTSL 2 BASIC19.89■□□□□ 0.77
CDX2Q99626 HIST2H3PS2-201ENST00000392948 411 ntAPPRIS P1 BASIC19.89■□□□□ 0.77
CDX2Q99626 P2RY6-204ENST00000393592 1515 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX2Q99626 PMP22-202ENST00000395936 816 ntTSL 3 BASIC19.89■□□□□ 0.77
CDX2Q99626 COA5-202ENST00000409997 557 ntTSL 4 BASIC19.89■□□□□ 0.77
CDX2Q99626 SMG1P5-201ENST00000411546 2362 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDX2Q99626 EIF2B1-204ENST00000537073 1768 ntTSL 2 BASIC19.89■□□□□ 0.77
CDX2Q99626 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC19.89■□□□□ 0.77
CDX2Q99626 SPSB3-208ENST00000566339 1784 ntAPPRIS P1 TSL 1 (best) BASIC19.89■□□□□ 0.77
CDX2Q99626 KANSL1-AS1-203ENST00000572973 424 ntTSL 3 BASIC19.89■□□□□ 0.77
CDX2Q99626 BNIP3P18-201ENST00000593976 575 ntBASIC19.89■□□□□ 0.77
CDX2Q99626 SERPINB6-207ENST00000612421 1570 ntTSL 2 BASIC19.89■□□□□ 0.77
CDX2Q99626 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC19.89■□□□□ 0.77
CDX2Q99626 DGUOK-208ENST00000629438 1029 ntTSL 1 (best) BASIC19.89■□□□□ 0.77
CDX2Q99626 ADM-206ENST00000528655 1889 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX2Q99626 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX2Q99626 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX2Q99626 MRAS-204ENST00000464896 1534 ntTSL 2 BASIC19.88■□□□□ 0.77
CDX2Q99626 ZNF76-203ENST00000373953 2716 ntAPPRIS P1 TSL 1 (best) BASIC19.88■□□□□ 0.77
CDX2Q99626 FLT3LG-204ENST00000595510 1301 ntTSL 5 BASIC19.88■□□□□ 0.77
CDX2Q99626 USP30-AS1-201ENST00000478808 656 ntTSL 2 BASIC19.88■□□□□ 0.77
Retrieved 100 of 98,524 protein–RNA pairs in 33.2 ms