Protein–RNA interactions for Protein: Q96L92

SNX27, Sorting nexin-27, humanhuman

Predictions only

Length 541 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SNX27Q96L92 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC20.55■□□□□ 0.88
SNX27Q96L92 ATOH8-201ENST00000306279 2438 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 CYP2E1-205ENST00000463117 1912 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
SNX27Q96L92 FLT1-204ENST00000541932 2969 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
SNX27Q96L92 RPS6KA2-201ENST00000265678 5824 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 CXorf40A-208ENST00000434353 1524 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SNX27Q96L92 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX27Q96L92 TINAGL1-201ENST00000271064 2187 ntAPPRIS P3 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 ST8SIA1-202ENST00000381424 1036 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC20.54■□□□□ 0.88
SNX27Q96L92 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.54■□□□□ 0.88
SNX27Q96L92 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 AC104076.2-201ENST00000448912 469 ntBASIC20.54■□□□□ 0.88
SNX27Q96L92 LINC01293-201ENST00000453951 1266 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX27Q96L92 CCDC106-206ENST00000591241 1153 ntTSL 3 BASIC20.54■□□□□ 0.88
SNX27Q96L92 AC091076.1-201ENST00000610741 619 ntBASIC20.54■□□□□ 0.88
SNX27Q96L92 AC008622.2-201ENST00000617006 1229 ntBASIC20.54■□□□□ 0.88
SNX27Q96L92 AC004263.2-201ENST00000617183 678 ntBASIC20.54■□□□□ 0.88
SNX27Q96L92 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC20.54■□□□□ 0.88
SNX27Q96L92 EIF2B1-201ENST00000424014 2477 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC20.54■□□□□ 0.88
SNX27Q96L92 LMNB1-202ENST00000395354 1572 ntTSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 AKIRIN2-201ENST00000257787 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
SNX27Q96L92 ACD-201ENST00000219251 2052 ntAPPRIS P3 TSL 2 BASIC20.54■□□□□ 0.88
SNX27Q96L92 EPHX4-201ENST00000370383 1437 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 KRT8P45-201ENST00000414328 1447 ntBASIC20.53■□□□□ 0.88
SNX27Q96L92 ESR2-212ENST00000556275 2695 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX27Q96L92 AC109460.3-201ENST00000569969 5296 ntTSL 2 BASIC20.53■□□□□ 0.88
SNX27Q96L92 CDH5-204ENST00000563425 1932 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX27Q96L92 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 MED25-201ENST00000312865 2332 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 PMS1-222ENST00000639501 2506 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX27Q96L92 GUCA1B-201ENST00000230361 1113 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 BX664615.1-201ENST00000443558 458 ntBASIC20.53■□□□□ 0.88
SNX27Q96L92 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 SMIM22-203ENST00000588500 525 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 FMR1-201ENST00000218200 4333 ntAPPRIS ALT2 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 ULK3-217ENST00000568667 1470 ntTSL 5 BASIC20.53■□□□□ 0.88
SNX27Q96L92 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 ZNF746-203ENST00000461958 5051 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 MARC2-202ENST00000366913 2134 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 MBIP-203ENST00000416007 1648 ntAPPRIS P3 TSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 COLCA2-201ENST00000398035 1414 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
SNX27Q96L92 LRIG1-201ENST00000273261 5273 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 AC093484.2-201ENST00000580996 2166 ntBASIC20.52■□□□□ 0.88
SNX27Q96L92 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX27Q96L92 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 LHX6-201ENST00000340587 3457 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX27Q96L92 IPPK-202ENST00000375522 882 ntTSL 3 BASIC20.52■□□□□ 0.88
SNX27Q96L92 DUX4L26-201ENST00000489078 1255 ntBASIC20.52■□□□□ 0.88
SNX27Q96L92 SNCB-205ENST00000510387 730 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.88
SNX27Q96L92 DIO1-206ENST00000525202 558 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 CENPX-206ENST00000580435 710 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 STX10-207ENST00000589083 1241 ntTSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX27Q96L92 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX27Q96L92 AC141257.4-201ENST00000634557 245 ntBASIC20.52■□□□□ 0.88
SNX27Q96L92 AC136944.6-201ENST00000634818 245 ntBASIC20.52■□□□□ 0.88
SNX27Q96L92 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 LAYN-203ENST00000436913 2590 ntTSL 2 BASIC20.52■□□□□ 0.88
SNX27Q96L92 AC141586.3-201ENST00000562166 1838 ntBASIC20.52■□□□□ 0.88
SNX27Q96L92 HEXDC-201ENST00000327949 1733 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 DACH1-201ENST00000611519 4789 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.88
SNX27Q96L92 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNX27Q96L92 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC20.52■□□□□ 0.87
SNX27Q96L92 MAGI2-202ENST00000419488 6800 ntAPPRIS ALT2 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNX27Q96L92 EIF5A-204ENST00000416016 1336 ntAPPRIS P1 TSL 1 (best) BASIC20.52■□□□□ 0.87
SNX27Q96L92 PTGES2-214ENST00000617202 1344 ntTSL 5 BASIC20.52■□□□□ 0.87
SNX27Q96L92 AC104581.1-201ENST00000324348 2852 ntAPPRIS P1 TSL 2 BASIC20.52■□□□□ 0.87
SNX27Q96L92 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX27Q96L92 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNX27Q96L92 ACY1-201ENST00000404366 1473 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX27Q96L92 PAQR4-203ENST00000572687 2251 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 RELB-207ENST00000625761 2279 ntAPPRIS ALT2 TSL 5 BASIC20.51■□□□□ 0.87
SNX27Q96L92 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC20.51■□□□□ 0.87
SNX27Q96L92 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX27Q96L92 CCDC91-207ENST00000539107 2440 ntTSL 5 BASIC20.51■□□□□ 0.87
SNX27Q96L92 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX27Q96L92 HRAS-201ENST00000311189 894 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX27Q96L92 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC20.51■□□□□ 0.87
SNX27Q96L92 CD70-202ENST00000423145 881 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 AC117947.1-201ENST00000427448 529 ntBASIC20.51■□□□□ 0.87
SNX27Q96L92 MUC1-212ENST00000457295 1161 ntAPPRIS ALT2 TSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 TRMT112-203ENST00000535750 823 ntTSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 AL512604.3-201ENST00000569583 964 ntBASIC20.51■□□□□ 0.87
SNX27Q96L92 MYEOV-202ENST00000441339 1996 ntAPPRIS P3 TSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 SLC34A3-201ENST00000361134 2124 ntAPPRIS P1 TSL 2 BASIC20.51■□□□□ 0.87
SNX27Q96L92 FFAR3-201ENST00000327809 1796 ntAPPRIS P1 TSL 1 (best) BASIC20.51■□□□□ 0.87
SNX27Q96L92 PCID2-203ENST00000375457 2372 ntTSL 1 (best) BASIC20.51■□□□□ 0.87
SNX27Q96L92 KRT8P3-201ENST00000519669 1449 ntBASIC20.51■□□□□ 0.87
Retrieved 100 of 98,524 protein–RNA pairs in 29.8 ms