Protein–RNA interactions for Protein: Q96F63

CCDC97, Coiled-coil domain-containing protein 97, humanhuman

Predicted RBP Predictions only

Length 343 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC97Q96F63 MFSD10-201ENST00000329687 2173 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 FAM131C-201ENST00000375662 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 AC044802.1-201ENST00000501143 2894 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 S1PR5-201ENST00000333430 2341 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 RIIAD1-201ENST00000326413 1772 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 EPOR-201ENST00000222139 2411 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 LANCL3-201ENST00000378619 3063 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 USF2-203ENST00000379134 648 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 AL390728.5-201ENST00000428687 706 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 BCL7B-206ENST00000455335 985 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 MRPL2-207ENST00000487429 905 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 AC026412.1-201ENST00000507290 1033 ntTSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 AZIN1-AS1-215ENST00000522939 644 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 MAX-217ENST00000557277 728 ntTSL 3 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 ARHGAP6-202ENST00000337414 5117 ntAPPRIS P4 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 EEPD1-201ENST00000242108 4765 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 GAREM2-201ENST00000401533 4161 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 ZSWIM4-201ENST00000254323 4339 ntAPPRIS P1 TSL 2 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 WNT2-201ENST00000265441 2907 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 DTWD1-202ENST00000403028 1584 ntAPPRIS P1 TSL 1 (best) BASIC19.4■□□□□ 0.7
CCDC97Q96F63 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC19.4■□□□□ 0.7
CCDC97Q96F63 RCCD1-201ENST00000394258 2689 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC97Q96F63 DBNL-210ENST00000448521 1808 ntAPPRIS ALT1 TSL 1 (best) BASIC19.39■□□□□ 0.7
CCDC97Q96F63 POLR1D-203ENST00000399697 2036 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 SOX2-201ENST00000325404 2513 ntAPPRIS P1 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 SLX1A-201ENST00000251303 1091 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 PLPP2-201ENST00000269812 1228 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 SLX1B-201ENST00000330181 1165 ntAPPRIS P4 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 AC092718.1-201ENST00000501068 1088 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 TK2-204ENST00000525974 1178 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 TMEM72-203ENST00000544540 1018 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 AC090970.2-201ENST00000561318 865 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 MIEF2-207ENST00000578621 540 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 UBL5-202ENST00000586895 432 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 AC020913.2-201ENST00000601929 629 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 ETFA-202ENST00000433983 1346 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 SARDH-201ENST00000298628 1484 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 C19orf25-206ENST00000588849 1472 ntTSL 5 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 CNEP1R1-203ENST00000458059 2965 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 FAM83A-205ENST00000522648 1604 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 MBD1-216ENST00000587605 1945 ntTSL 2 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 POC1A-202ENST00000394970 1999 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC19.39■□□□□ 0.69
CCDC97Q96F63 NYX-202ENST00000378220 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CCDC97Q96F63 TRMT2A-201ENST00000252136 2964 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC97Q96F63 KDM5C-202ENST00000375379 5245 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC97Q96F63 COL13A1-201ENST00000354547 3027 ntAPPRIS ALT2 TSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 TREX2-204ENST00000370212 861 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 TREX2-205ENST00000370231 1255 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 TMEM198-202ENST00000373883 2218 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC97Q96F63 TREX2-207ENST00000393862 907 ntAPPRIS P1 TSL 2 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 COL13A1-205ENST00000398978 3093 ntAPPRIS P4 TSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 NBPF21P-201ENST00000425093 1451 ntBASIC19.38■□□□□ 0.69
CCDC97Q96F63 JMJD4-202ENST00000438896 2502 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 RNF135-204ENST00000443677 1261 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC97Q96F63 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 TRMT6-202ENST00000453074 2239 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 HOXC13-AS-201ENST00000512916 1408 ntTSL 3 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 B3GAT3-205ENST00000534026 1120 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 KXD1-202ENST00000539106 1496 ntAPPRIS P1 TSL 3 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 CORO1B-210ENST00000627576 960 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 FAM135A-209ENST00000505769 4806 ntTSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 HELZ2-202ENST00000427522 7827 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC97Q96F63 SLC30A4-201ENST00000261867 7157 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CCDC97Q96F63 LEMD2-214ENST00000614475 2883 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CCDC97Q96F63 IQCE-217ENST00000623361 6775 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC97Q96F63 CARD10-202ENST00000403299 4113 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CCDC97Q96F63 CTBP2-205ENST00000411419 2036 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC97Q96F63 ZDHHC20-209ENST00000542645 5315 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC97Q96F63 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC97Q96F63 CYHR1-202ENST00000403000 1477 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC97Q96F63 CD8B-203ENST00000390655 1417 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC97Q96F63 VEGFB-201ENST00000309422 1380 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC97Q96F63 LCN8-201ENST00000371688 867 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CCDC97Q96F63 C5orf56-203ENST00000378953 942 ntAPPRIS ALT2 TSL 2 BASIC19.37■□□□□ 0.69
CCDC97Q96F63 AC110769.1-201ENST00000420161 815 ntTSL 3 BASIC19.37■□□□□ 0.69
CCDC97Q96F63 HGNC:18790-208ENST00000506380 798 ntAPPRIS P1 TSL 3 BASIC19.37■□□□□ 0.69
CCDC97Q96F63 CXCL2-202ENST00000508487 1218 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 31.6 ms