Protein–RNA interactions for Protein: Q96EP1

CHFR, E3 ubiquitin-protein ligase CHFR, humanhuman

Predictions only

Length 664 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHFRQ96EP1 NAA50-209ENST00000497525 1385 ntTSL 2 BASIC19.38■□□□□ 0.69
CHFRQ96EP1 RPS6KL1-216ENST00000557413 2425 ntAPPRIS P1 TSL 5 BASIC19.38■□□□□ 0.69
CHFRQ96EP1 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHFRQ96EP1 ZNF821-221ENST00000611294 1833 ntTSL 3 BASIC19.38■□□□□ 0.69
CHFRQ96EP1 PNKP-224ENST00000631020 1545 ntTSL 5 BASIC19.38■□□□□ 0.69
CHFRQ96EP1 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC19.38■□□□□ 0.69
CHFRQ96EP1 ACY1-215ENST00000636358 1684 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHFRQ96EP1 FGFR2-211ENST00000369059 3003 ntTSL 5 BASIC19.38■□□□□ 0.69
CHFRQ96EP1 EBF4-202ENST00000380648 2910 ntAPPRIS P2 TSL 5 BASIC19.38■□□□□ 0.69
CHFRQ96EP1 ABLIM2-205ENST00000428004 2573 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHFRQ96EP1 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 TH-206ENST00000381178 1910 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 BEST2-201ENST00000042931 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 RAP1GDS1-201ENST00000264572 1686 ntTSL 5 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 AC036111.1-201ENST00000533973 1582 ntBASIC19.37■□□□□ 0.69
CHFRQ96EP1 FBXW9-203ENST00000587955 1437 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 KLHDC4-227ENST00000622456 1422 ntTSL 5 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 RNF113B-201ENST00000267291 1376 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 GJA8-201ENST00000369235 1302 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 NTMT1-203ENST00000372483 1315 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 TEX22-201ENST00000451127 2571 ntAPPRIS P1 TSL 2 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 AL023284.2-201ENST00000405850 579 ntBASIC19.37■□□□□ 0.69
CHFRQ96EP1 TMEM135-209ENST00000532959 1149 ntTSL 2 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 AC124016.1-202ENST00000609575 619 ntTSL 2 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 COCH-201ENST00000216361 2397 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 AFDN-202ENST00000351017 5823 ntTSL 5 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 T-202ENST00000366871 2250 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHFRQ96EP1 AL035252.2-201ENST00000454676 3168 ntTSL 2 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 SP9-201ENST00000394967 2554 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHFRQ96EP1 THNSL2-205ENST00000449349 1616 ntTSL 5 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 PRDX3-201ENST00000298510 1591 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHFRQ96EP1 DOK7-206ENST00000515886 2263 ntTSL 2 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 GAS2L1P1-201ENST00000420145 1480 ntBASIC19.36■□□□□ 0.69
CHFRQ96EP1 PQLC2-201ENST00000375153 2153 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 TMEM88-201ENST00000301599 875 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHFRQ96EP1 MRPL20-201ENST00000344843 721 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHFRQ96EP1 NTF4-201ENST00000593537 932 ntAPPRIS P1 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 AC004076.1-201ENST00000596831 664 ntAPPRIS P1 TSL 2 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 BCL10-202ENST00000620248 774 ntTSL 5 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 TRIM46-204ENST00000368385 1864 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHFRQ96EP1 GALNT8-202ENST00000433855 5977 ntTSL 2 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 FAM72B-202ENST00000369390 2396 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHFRQ96EP1 GAMT-202ENST00000447102 1769 ntTSL 2 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 MSANTD1-203ENST00000507492 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHFRQ96EP1 AC073130.3-201ENST00000624389 2278 ntBASIC19.36■□□□□ 0.69
CHFRQ96EP1 C11orf49-201ENST00000278460 1645 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHFRQ96EP1 DNAJB5-203ENST00000453597 2589 ntTSL 2 BASIC19.36■□□□□ 0.69
CHFRQ96EP1 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 CDK5R2-201ENST00000302625 2508 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 TMEM98-206ENST00000579849 4434 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 FGFR2-224ENST00000613048 4369 ntTSL 5 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 CERKL-205ENST00000409440 2425 ntTSL 2 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 ARFGAP3-201ENST00000263245 2857 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 HUNK-201ENST00000270112 7385 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 PAFAH1B3-201ENST00000262890 1003 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 OR10H5-201ENST00000308940 1132 ntAPPRIS P1 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 FAM41C-202ENST00000432963 504 ntTSL 2 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 AC087623.2-201ENST00000528407 534 ntTSL 4 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 IFI27L1-206ENST00000554562 571 ntTSL 3 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 AC024243.1-201ENST00000609234 778 ntBASIC19.35■□□□□ 0.69
CHFRQ96EP1 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 ST8SIA2-201ENST00000268164 5708 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 TMEM161A-202ENST00000450333 1930 ntTSL 2 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 PRMT5-201ENST00000216350 2271 ntTSL 2 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 ANKLE1-204ENST00000594072 2294 ntTSL 5 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 HDGFL2-208ENST00000616600 2281 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHFRQ96EP1 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC19.35■□□□□ 0.69
CHFRQ96EP1 ERVK13-1-203ENST00000564340 1449 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 PPP4R2-201ENST00000356692 4984 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 TRIM3-202ENST00000359518 3042 ntAPPRIS P1 TSL 5 BASIC19.34■□□□□ 0.69
CHFRQ96EP1 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC19.34■□□□□ 0.69
CHFRQ96EP1 ZDHHC17-201ENST00000426126 5259 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 NEU4-201ENST00000325935 2288 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 MTX1-202ENST00000368376 1632 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 ADGRA3-204ENST00000502482 2870 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 BOLA2B-201ENST00000305321 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 BOLA2-201ENST00000330978 1012 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 FIBP-202ENST00000357519 1248 ntAPPRIS P1 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 HEBP2-201ENST00000367697 844 ntTSL 2 BASIC19.34■□□□□ 0.69
CHFRQ96EP1 AL645929.1-201ENST00000420084 975 ntBASIC19.34■□□□□ 0.69
CHFRQ96EP1 PLPP5-202ENST00000422581 853 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 TPM4P1-201ENST00000436100 807 ntBASIC19.34■□□□□ 0.69
CHFRQ96EP1 AL162258.2-202ENST00000469931 831 ntTSL 5 BASIC19.34■□□□□ 0.69
CHFRQ96EP1 MRPL2-208ENST00000489623 570 ntTSL 2 BASIC19.34■□□□□ 0.69
CHFRQ96EP1 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC19.34■□□□□ 0.69
CHFRQ96EP1 AC011247.3-202ENST00000605062 570 ntTSL 4 BASIC19.34■□□□□ 0.69
CHFRQ96EP1 GPX4-210ENST00000611653 793 ntTSL 1 (best) BASIC19.34■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 55.1 ms