Protein–RNA interactions for Protein: Q8WUY9

DEPDC1B, DEP domain-containing protein 1B, humanhuman

Predictions only

Length 529 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
DEPDC1BQ8WUY9 AP3S1-201ENST00000316788 1730 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 KCNK4-207ENST00000539216 1723 ntAPPRIS P1 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 RIMBP3C-201ENST00000331505 5475 ntAPPRIS ALT2 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 PQLC2-202ENST00000375155 1805 ntAPPRIS P1 TSL 2 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 AC006001.3-204ENST00000638711 2103 ntTSL 5 BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 FAM213B-204ENST00000419916 2749 ntAPPRIS P3 TSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 SLC9A6-202ENST00000370698 4631 ntTSL 1 (best) BASIC20.15■□□□□ 0.82
DEPDC1BQ8WUY9 GAS2L1-208ENST00000616432 2925 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.82
DEPDC1BQ8WUY9 CDC42EP1-201ENST00000249014 2181 ntAPPRIS P2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 DNASE1L2-203ENST00000564065 2194 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 KLHDC4-201ENST00000270583 1886 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 KRAS-203ENST00000556131 1696 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 CHRM4-201ENST00000433765 1511 ntAPPRIS P1 BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 MCRS1-202ENST00000357123 1428 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 FAM212B-203ENST00000444059 1423 ntTSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 RASGRP2-205ENST00000377489 583 ntTSL 3 BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 AL929554.1-201ENST00000568665 460 ntAPPRIS P1 TSL 3 BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 AC010653.2-201ENST00000623505 997 ntBASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 MARK2-202ENST00000361128 3004 ntAPPRIS ALT2 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 NSMF-201ENST00000265663 2981 ntAPPRIS P3 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 MARK2-208ENST00000508192 2924 ntAPPRIS P3 TSL 5 BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 AMDHD1-201ENST00000266736 2260 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 HDAC1-201ENST00000373548 2124 ntAPPRIS P1 TSL 1 (best) BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 TFEB-211ENST00000420312 1996 ntTSL 5 BASIC20.14■□□□□ 0.81
DEPDC1BQ8WUY9 SMARCC1-201ENST00000254480 6375 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 FGF16-201ENST00000439435 1650 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 SLC25A39-202ENST00000377095 1565 ntAPPRIS ALT1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 KXD1-203ENST00000540691 1592 ntAPPRIS P1 TSL 3 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 TMEM25-203ENST00000354284 1456 ntTSL 2 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 AC008073.3-201ENST00000610442 2281 ntAPPRIS P1 TSL 2 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 KRTCAP3-201ENST00000288873 872 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 RHEBL1-201ENST00000301068 1210 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 COMMD1-201ENST00000311832 911 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 AC007731.5-201ENST00000429594 644 ntAPPRIS P1 TSL 5 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 RBPMS-AS1-202ENST00000519753 1031 ntTSL 5 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 NBPF14-202ENST00000593495 1082 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 COLCA2-205ENST00000614153 1264 ntTSL 3 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 FP565260.3-205ENST00000620481 816 ntTSL 5 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 HTRA4-201ENST00000302495 2095 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 ZNF398-202ENST00000475153 2860 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 DPF1-203ENST00000414789 1960 ntTSL 2 BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 KLHDC4-203ENST00000347925 1821 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 STOML1-209ENST00000564777 1849 ntTSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 FAM228A-201ENST00000295150 1774 ntAPPRIS P2 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 KRT16-201ENST00000301653 1644 ntAPPRIS P1 TSL 1 (best) BASIC20.13■□□□□ 0.81
DEPDC1BQ8WUY9 FAM129C-201ENST00000332386 2222 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 WWOX-202ENST00000402655 1594 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 RGMB-207ENST00000513185 2052 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 ACD-214ENST00000620338 2065 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 INSM2-201ENST00000307169 3013 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 MLF2-202ENST00000435120 1379 ntAPPRIS P1 TSL 2 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 SYT15-205ENST00000503753 1331 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 MFSD1-219ENST00000622669 2361 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 BAD-201ENST00000309032 929 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 HLA-DRB1-201ENST00000360004 1229 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 TSPY8-202ENST00000383000 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 TSPY2-202ENST00000383042 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 NFU1-202ENST00000394305 1058 ntTSL 5 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 TSPY3-201ENST00000424594 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 AC117947.1-201ENST00000427448 529 ntBASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 TSPY10-202ENST00000444056 1125 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 WDR45-218ENST00000473974 1077 ntTSL 5 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 RAP1B-229ENST00000543393 874 ntTSL 3 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 C16orf74-207ENST00000602914 761 ntAPPRIS ALT2 TSL 2 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 PRLHR-202ENST00000636925 1275 ntAPPRIS P1 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 ITPKB-202ENST00000366784 3146 ntTSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 PAX1-205ENST00000613128 5352 ntAPPRIS ALT2 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 NGLY1-202ENST00000280700 2473 ntAPPRIS P1 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 KANSL1-202ENST00000432791 5343 ntAPPRIS P3 TSL 1 (best) BASIC20.12■□□□□ 0.81
DEPDC1BQ8WUY9 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 KRT8P8-201ENST00000434750 1448 ntBASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 KRT87P-201ENST00000529785 1700 ntTSL 2 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 NDUFB9-206ENST00000522532 1319 ntTSL 2 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 MEN1-208ENST00000394374 3155 ntAPPRIS P3 TSL 5 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 TXNRD2-203ENST00000400519 3155 ntAPPRIS ALT2 TSL 1 (best) BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 LCE3C-201ENST00000333881 425 ntAPPRIS P1 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 GUK1-204ENST00000366721 689 ntTSL 3 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 SHBG-203ENST00000416273 1042 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 HDAC11-AS1-201ENST00000424112 515 ntTSL 2 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 AC091390.4-202ENST00000476426 537 ntBASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 AC009185.1-201ENST00000517634 911 ntTSL 3 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 SHBG-215ENST00000575903 1196 ntTSL 3 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 ZNF667-AS1-208ENST00000594783 475 ntTSL 3 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 AL138966.2-201ENST00000621997 464 ntBASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 NAB2-201ENST00000300131 2711 ntAPPRIS P1 TSL 1 (best) BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 SCO1-203ENST00000577427 1601 ntTSL 3 BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 MOK-201ENST00000361847 1940 ntAPPRIS P3 TSL 1 (best) BASIC20.11■□□□□ 0.81
DEPDC1BQ8WUY9 EPN3-216ENST00000537145 2223 ntTSL 5 BASIC20.11■□□□□ 0.81
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms