Protein–RNA interactions for Protein: Q8TER5

ARHGEF40, Rho guanine nucleotide exchange factor 40, humanhuman

Predictions only

Length 1,519 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGEF40Q8TER5 AC139887.3-201ENST00000568585 713 ntBASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 ANAPC11-204ENST00000571024 668 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 ANAPC11-218ENST00000582222 523 ntTSL 2 BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 AL139424.1-201ENST00000607572 797 ntBASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 PNKP-214ENST00000600573 1602 ntTSL 5 BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 SEPT4-201ENST00000317256 1530 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 G6PD-202ENST00000393562 2631 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 G6PD-211ENST00000621232 2631 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 TPST2-202ENST00000398110 1968 ntAPPRIS P1 TSL 2 BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 ZFC3H1-206ENST00000548100 1771 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 SLC9A3-201ENST00000264938 2584 ntAPPRIS P3 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 LINC00311-201ENST00000366314 1566 ntTSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC28.24■■■□□ 2.11
ARHGEF40Q8TER5 TMEM219-201ENST00000279396 999 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 ZPBP2-204ENST00000584588 1277 ntTSL 5 BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 AC008608.2-201ENST00000606089 416 ntBASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 EYA2-203ENST00000357410 2465 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 MYB-221ENST00000527615 2381 ntTSL 5 BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 AGMAT-201ENST00000375826 2500 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 FDFT1-210ENST00000525954 1890 ntTSL 2 BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 ADORA2A-AS1-203ENST00000427813 2027 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 AC104417.2-201ENST00000562989 1793 ntBASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 CD1E-211ENST00000368166 1271 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 TM4SF19-TCTEX1D2-201ENST00000442633 964 ntAPPRIS P1 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 MCCC2-205ENST00000509358 1214 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 AP001453.1-201ENST00000534988 923 ntTSL 3 BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 PPP3CC-201ENST00000240139 2189 ntAPPRIS P3 TSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 JPH2-201ENST00000342272 1923 ntTSL 1 (best) BASIC28.23■■■□□ 2.11
ARHGEF40Q8TER5 FBXW4P1-201ENST00000426721 2239 ntBASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 BRWD1-202ENST00000341322 2495 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 TRAM2-AS1-204ENST00000606714 2453 ntTSL 2 BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 ARSE-205ENST00000540563 1990 ntTSL 2 BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 MCRIP2-201ENST00000307650 946 ntAPPRIS P1 TSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 TSTD1-203ENST00000368024 457 ntTSL 2 BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 INPP5F-203ENST00000369081 874 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 AC098831.1-202ENST00000438821 336 ntBASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 EIF5A2-203ENST00000474096 570 ntTSL 4 BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 AC022509.3-202ENST00000545819 566 ntTSL 3 BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 AC145285.3-201ENST00000564603 959 ntBASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 IQSEC2-210ENST00000639161 936 ntTSL 1 (best) BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 AC008691.1-203ENST00000515337 1580 ntTSL 2 BASIC28.22■■■□□ 2.11
ARHGEF40Q8TER5 WRB-201ENST00000333781 1616 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 AL360181.3-201ENST00000468317 1605 ntAPPRIS P1 TSL 5 BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 C1QL4-201ENST00000334221 2071 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 WDR45-206ENST00000376368 1381 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 ZGPAT-206ENST00000448100 1881 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 CD19-206ENST00000567541 1707 ntAPPRIS ALT2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 TMEM222-201ENST00000374076 1599 ntAPPRIS P2 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 ADIPOR1-202ENST00000367254 1116 ntTSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 GNMT-201ENST00000372808 1072 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 IGHGP-201ENST00000390555 1178 ntBASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 RPL8-202ENST00000394920 965 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 AC104971.2-201ENST00000588144 1209 ntTSL 2 BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 AC055717.3-201ENST00000622967 595 ntBASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 ISYNA1-201ENST00000338128 2420 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 INTS11-202ENST00000411962 1832 ntTSL 5 BASIC28.21■■■□□ 2.11
ARHGEF40Q8TER5 DYRK1B-204ENST00000593685 2724 ntAPPRIS P3 TSL 5 BASIC28.2■■■□□ 2.11
ARHGEF40Q8TER5 PABPC1L2A-201ENST00000373519 2237 ntAPPRIS P1 BASIC28.2■■■□□ 2.11
ARHGEF40Q8TER5 SEPT5-209ENST00000438754 2241 ntTSL 2 BASIC28.2■■■□□ 2.11
ARHGEF40Q8TER5 RGS20-202ENST00000297313 2104 ntTSL 1 (best) BASIC28.2■■■□□ 2.11
ARHGEF40Q8TER5 AP000688.1-201ENST00000535199 1221 ntTSL 2 BASIC28.2■■■□□ 2.1
ARHGEF40Q8TER5 AC010327.4-202ENST00000591484 748 ntBASIC28.2■■■□□ 2.1
ARHGEF40Q8TER5 CAPN12-212ENST00000601953 2381 ntTSL 5 BASIC28.2■■■□□ 2.1
ARHGEF40Q8TER5 LRRC42-203ENST00000371370 2037 ntAPPRIS P1 TSL 2 BASIC28.2■■■□□ 2.1
ARHGEF40Q8TER5 BEST2-204ENST00000553030 2000 ntAPPRIS P1 TSL 5 BASIC28.2■■■□□ 2.1
ARHGEF40Q8TER5 ATG2A-203ENST00000421419 1481 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ARHGEF40Q8TER5 AC062028.1-203ENST00000447433 1472 ntTSL 1 (best) BASIC28.2■■■□□ 2.1
ARHGEF40Q8TER5 FBXO44-201ENST00000251546 1896 ntTSL 2 BASIC28.2■■■□□ 2.1
ARHGEF40Q8TER5 RIPPLY3-201ENST00000329553 2235 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 MTMR9LP-202ENST00000423995 1878 ntTSL 2 BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 ROMO1-204ENST00000374078 498 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 MIR564-202ENST00000385049 94 ntBASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 DARS-AS1-202ENST00000419808 772 ntTSL 5 BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 URGCP-206ENST00000446958 365 ntTSL 2 BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 CR559946.1-201ENST00000453835 531 ntTSL 4 BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 RN7SL606P-201ENST00000472779 293 ntBASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 ATPAF2-213ENST00000585101 566 ntTSL 4 BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 SHMT1-202ENST00000352886 2437 ntTSL 2 BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 DBNL-220ENST00000494774 2117 ntAPPRIS P4 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 C6orf89-203ENST00000373685 1400 ntAPPRIS ALT2 TSL 5 BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 HOXB1-202ENST00000577092 1414 ntBASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 PRSS33-201ENST00000293851 1694 ntAPPRIS P1 TSL 1 (best) BASIC28.19■■■□□ 2.1
ARHGEF40Q8TER5 PKM-215ENST00000565154 2004 ntAPPRIS ALT1 TSL 2 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 FAM3A-204ENST00000369643 1521 ntAPPRIS P1 TSL 2 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 RBX1-201ENST00000216225 1188 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 CT47A11-201ENST00000457020 1294 ntAPPRIS P1 TSL 1 (best) BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 TXNRD2-212ENST00000485358 850 ntTSL 2 BASIC28.18■■■□□ 2.1
ARHGEF40Q8TER5 REXO2-206ENST00000539275 710 ntTSL 1 (best) BASIC28.18■■■□□ 2.1
Retrieved 100 of 98,524 protein–RNA pairs in 32.5 ms