Protein–RNA interactions for Protein: Q8TAB3

PCDH19, Protocadherin-19, humanhuman

Predictions only

Length 1,148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PCDH19Q8TAB3 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 CENPA-201ENST00000233505 1299 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 DERL1-203ENST00000419562 918 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 ZNF599-203ENST00000588760 948 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 AL031985.4-201ENST00000642138 673 ntBASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 C20orf27-201ENST00000217195 1302 ntTSL 2 BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 OTUD1-201ENST00000376495 2933 ntAPPRIS P1 BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 SUMF2-202ENST00000342190 1876 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 ISOC1-201ENST00000173527 1940 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 RIPK2-201ENST00000220751 2584 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 FAM206A-201ENST00000322940 2134 ntAPPRIS P1 TSL 1 (best) BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 LINC01819-201ENST00000422351 2156 ntTSL 5 BASIC19.66■□□□□ 0.74
PCDH19Q8TAB3 TBC1D19-201ENST00000264866 2263 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 CDC14B-203ENST00000375242 2965 ntTSL 2 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 CD7-206ENST00000583376 1659 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 CYP2D7-203ENST00000433992 1740 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 CYP2D7-207ENST00000612115 1734 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 GHDC-212ENST00000593209 1827 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 FAM189B-204ENST00000368368 2609 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 SBNO2-201ENST00000361757 4923 ntAPPRIS P4 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 ATP6V0E2-203ENST00000456496 2722 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 ATP6V0E2-213ENST00000615196 2727 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 IL10RB-201ENST00000290200 1963 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 BIK-201ENST00000216115 953 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 METTL27-201ENST00000297873 941 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 IMMP2L-201ENST00000331762 1205 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 AC012618.2-201ENST00000428058 849 ntBASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 C16orf90-202ENST00000437192 907 ntAPPRIS P1 TSL 5 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 AC011506.1-201ENST00000474329 610 ntBASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 ROPN1L-202ENST00000503804 1291 ntAPPRIS P1 TSL 2 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 REXO2-216ENST00000544196 452 ntTSL 3 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 AC026271.3-201ENST00000571884 352 ntBASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 AC087498.1-201ENST00000572493 945 ntAPPRIS P1 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 FAM98C-205ENST00000588262 826 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 TRIM47-201ENST00000254816 2266 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 PARS2-201ENST00000371279 2347 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 WISP2-201ENST00000190983 1403 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 UBE2K-201ENST00000261427 5245 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 METRN-204ENST00000568223 3325 ntAPPRIS P2 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 LARGE2-208ENST00000531526 2528 ntAPPRIS P3 TSL 2 BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 MEF2A-202ENST00000354410 5824 ntAPPRIS P3 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 TMEM74-201ENST00000297459 1741 ntAPPRIS P1 TSL 1 (best) BASIC19.65■□□□□ 0.74
PCDH19Q8TAB3 P2RX5-203ENST00000547178 1998 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH19Q8TAB3 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC19.64■□□□□ 0.74
PCDH19Q8TAB3 AIRE-201ENST00000291582 2257 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.74
PCDH19Q8TAB3 PAX1-201ENST00000398485 2838 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 MEN1-202ENST00000315422 3148 ntAPPRIS ALT1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 SPSB1-201ENST00000328089 3120 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 RPS6KA1-203ENST00000374166 3131 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 CXXC4-201ENST00000394767 5565 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 HAS3-201ENST00000219322 1163 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 METTL21A-201ENST00000272839 1210 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 AC004951.3-201ENST00000418645 1148 ntBASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 FAM197Y1-201ENST00000421178 764 ntBASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 LTB-210ENST00000429299 897 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 PAIP2-208ENST00000511706 468 ntTSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 ISG20-210ENST00000560741 800 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 NPAS1-201ENST00000439365 1341 ntTSL 2 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 SEMA3D-202ENST00000444867 1605 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 RNF167-205ENST00000571816 1728 ntAPPRIS P3 TSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 OCSTAMP-201ENST00000279028 2043 ntAPPRIS P1 TSL 5 BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 AIPL1-209ENST00000575265 2111 ntAPPRIS ALT2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 CASC2-205ENST00000454781 2216 ntTSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 TEPSIN-201ENST00000300714 2287 ntAPPRIS P2 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 TMEM129-202ENST00000382936 2810 ntAPPRIS P1 TSL 1 (best) BASIC19.64■□□□□ 0.73
PCDH19Q8TAB3 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 PLA2G7-201ENST00000274793 1882 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AL138781.2-201ENST00000617896 1843 ntBASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 IL17C-201ENST00000244241 1044 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 TCEAL6-202ENST00000372774 1106 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 HOXA9-202ENST00000396345 797 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 RPS2P55-201ENST00000397318 883 ntBASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 CCK-203ENST00000434608 747 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AC107956.1-201ENST00000494359 873 ntBASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 ADGRD1-AS1-202ENST00000542980 1277 ntTSL 4 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 SMIM1-203ENST00000561886 491 ntTSL 2 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AC027682.2-201ENST00000563083 336 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AC122129.2-201ENST00000583598 466 ntTSL 5 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AC233702.5-201ENST00000584107 538 ntBASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 SMAD7-207ENST00000589634 1278 ntAPPRIS ALT1 TSL 4 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AC103746.1-201ENST00000617440 1133 ntTSL 3 BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AC011298.2-201ENST00000617989 482 ntBASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 AC130371.2-201ENST00000619443 611 ntBASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 FBXL20-202ENST00000394294 2309 ntTSL 1 (best) BASIC19.63■□□□□ 0.73
PCDH19Q8TAB3 TULP1-201ENST00000229771 2162 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 30.9 ms