Protein–RNA interactions for Protein: Q8NEP7

KLHDC9, Kelch domain-containing protein 9, humanhuman

Predictions only

Length 349 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KLHDC9Q8NEP7 PSCA-201ENST00000301258 1020 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KLHDC9Q8NEP7 AC009078.2-202ENST00000463353 338 ntBASIC21.02■□□□□ 0.96
KLHDC9Q8NEP7 AC008825.1-201ENST00000504398 452 ntTSL 3 BASIC21.02■□□□□ 0.96
KLHDC9Q8NEP7 RCHY1-208ENST00000512706 1011 ntTSL 3 BASIC21.02■□□□□ 0.96
KLHDC9Q8NEP7 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC21.02■□□□□ 0.96
KLHDC9Q8NEP7 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC21.02■□□□□ 0.96
KLHDC9Q8NEP7 AL732292.2-201ENST00000609649 430 ntBASIC21.02■□□□□ 0.96
KLHDC9Q8NEP7 C7orf43-201ENST00000316937 2520 ntAPPRIS P1 TSL 1 (best) BASIC21.02■□□□□ 0.95
KLHDC9Q8NEP7 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC21.02■□□□□ 0.95
KLHDC9Q8NEP7 DHRS3-204ENST00000616661 1722 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 CEL-201ENST00000372080 2384 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 MICA-209ENST00000449934 1386 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 IDH1-205ENST00000446179 2298 ntAPPRIS P1 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 TPCN2-205ENST00000542467 2000 ntTSL 2 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 HEXIM2-201ENST00000307275 1528 ntAPPRIS P1 TSL 2 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 PRTN3-202ENST00000544537 1036 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 AC009084.1-201ENST00000566869 317 ntTSL 5 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 GNAS-AS1-203ENST00000598163 548 ntTSL 4 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 CLN3-259ENST00000637551 1083 ntTSL 5 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 SLC22A17-211ENST00000637426 1563 ntAPPRIS ALT2 TSL 1 (best) BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC21.01■□□□□ 0.95
KLHDC9Q8NEP7 REXO1-201ENST00000170168 4591 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 BUB3-201ENST00000368858 1361 ntAPPRIS ALT1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 HIKESHI-207ENST00000533986 1694 ntTSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 GSX2-201ENST00000326902 1812 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 MOS-201ENST00000311923 1041 ntAPPRIS P1 BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 LINC01534-202ENST00000433232 554 ntTSL 3 BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 CIB2-208ENST00000560618 804 ntTSL 2 BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 TYROBP-205ENST00000585901 620 ntTSL 3 BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 TPSB2-201ENST00000606293 1165 ntAPPRIS ALT2 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 AL031008.1-201ENST00000619963 541 ntBASIC21■□□□□ 0.95
KLHDC9Q8NEP7 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 CENPT-215ENST00000564817 1638 ntAPPRIS ALT2 TSL 5 BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC21■□□□□ 0.95
KLHDC9Q8NEP7 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 CA11-201ENST00000084798 1844 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 FAM182B-201ENST00000376403 1681 ntAPPRIS P5 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 UBE2F-201ENST00000272930 2009 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 TH-203ENST00000352909 1889 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 ACTL6A-201ENST00000392662 1899 ntTSL 2 BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 HDHD5-201ENST00000155674 1735 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 AL591212.1-201ENST00000433646 615 ntTSL 5 BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 ARSK-202ENST00000504763 1088 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 LINC01582-202ENST00000561215 452 ntTSL 4 BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 ADARB1-205ENST00000437626 5032 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 VEGFA-204ENST00000372064 2909 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 ASL-205ENST00000395332 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
KLHDC9Q8NEP7 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 TTC39C-202ENST00000317571 2442 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 CTGF-201ENST00000367976 2339 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 NFS1-204ENST00000397425 1956 ntTSL 5 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 GML-201ENST00000220940 723 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 AL645608.6-201ENST00000418300 402 ntTSL 3 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 TTTY14-203ENST00000447937 920 ntTSL 3 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 PNN-202ENST00000553331 656 ntTSL 3 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 C14orf144-201ENST00000553757 537 ntTSL 4 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 AL121772.3-201ENST00000610840 674 ntBASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 C10orf142-202ENST00000623589 1010 ntAPPRIS ALT2 TSL 5 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 IFRD1-201ENST00000005558 1834 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 RHNO1-204ENST00000489288 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 CFAP97-205ENST00000514798 2895 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 SUMO3-204ENST00000411651 1921 ntTSL 2 BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 KRT16P3-203ENST00000580621 1939 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 ZBTB7B-201ENST00000292176 2129 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
KLHDC9Q8NEP7 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC20.97■□□□□ 0.95
KLHDC9Q8NEP7 AKR1A1-214ENST00000621846 1360 ntAPPRIS P1 TSL 5 BASIC20.97■□□□□ 0.95
KLHDC9Q8NEP7 TMEM91-210ENST00000542945 1610 ntTSL 2 BASIC20.97■□□□□ 0.95
KLHDC9Q8NEP7 MOGS-202ENST00000409065 2668 ntTSL 5 BASIC20.97■□□□□ 0.95
KLHDC9Q8NEP7 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC20.97■□□□□ 0.95
KLHDC9Q8NEP7 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 20.3 ms