Protein–RNA interactions for Protein: Q8N4M1

SLC44A3, Choline transporter-like protein 3, humanhuman

Predictions only

Length 653 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC44A3Q8N4M1 GRAMD4P1-201ENST00000435181 1110 ntBASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 ENO1-AS1-201ENST00000442636 456 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 ZFPM1-205ENST00000569086 563 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 GPALPP1-207ENST00000611650 899 ntBASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 CDK2AP1-207ENST00000618072 1144 ntTSL 3 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 AL031008.1-201ENST00000619963 541 ntBASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 WDR6-223ENST00000627177 207 ntTSL 2 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 PFKFB3-217ENST00000626882 1965 ntTSL 5 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 HFE2-202ENST00000357836 2123 ntTSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 D2HGDH-201ENST00000321264 2617 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 DOK2-201ENST00000276420 1936 ntAPPRIS P1 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 CCDC74A-206ENST00000467992 1347 ntAPPRIS ALT2 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 RBM14-RBM4-201ENST00000412278 1566 ntAPPRIS P1 TSL 2 BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 AC036111.1-201ENST00000533973 1582 ntBASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 FAM118B-209ENST00000533050 2402 ntAPPRIS P3 TSL 1 (best) BASIC19.49■□□□□ 0.71
SLC44A3Q8N4M1 FAM120A-201ENST00000277165 5118 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 ME3-212ENST00000543262 2311 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 AP005212.1-201ENST00000581547 1997 ntBASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 SMN2-202ENST00000380742 1388 ntAPPRIS ALT2 TSL 5 BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 APTR-204ENST00000440088 2029 ntTSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 TMEM150B-201ENST00000326652 943 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 YBEY-201ENST00000329319 1019 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 YBEY-206ENST00000397701 744 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 TSPY22P-201ENST00000427496 604 ntBASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 AL359747.1-201ENST00000442370 536 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 SEC1P-202ENST00000473944 940 ntBASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 AC079031.1-201ENST00000542627 1035 ntTSL 3 BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 AL160237.2-201ENST00000556165 472 ntBASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 SPINT1-AS1-202ENST00000564302 643 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 AC091304.2-201ENST00000564639 760 ntBASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 ARHGDIA-201ENST00000269321 1906 ntAPPRIS P1 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 EPS8L1-203ENST00000540810 2360 ntTSL 2 BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 ZNF692-202ENST00000366471 1710 ntAPPRIS ALT2 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 ANAPC4-201ENST00000315368 2685 ntAPPRIS P3 TSL 1 (best) BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 TUBA1A-201ENST00000295766 1887 ntAPPRIS P1 TSL 2 BASIC19.48■□□□□ 0.71
SLC44A3Q8N4M1 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 KIF12-207ENST00000640217 2194 ntAPPRIS P5 TSL 5 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CACNB2-203ENST00000352115 1911 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 MIR4300HG-201ENST00000500502 1397 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 RABEPK-202ENST00000373538 1504 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 MAST2-201ENST00000361297 5738 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 LCE1F-201ENST00000334371 357 ntAPPRIS P1 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CORT-201ENST00000377049 1130 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CD99-205ENST00000381192 1245 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 MIR662-201ENST00000384847 95 ntBASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 SDR39U1-201ENST00000399395 1233 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 MRPL28-203ENST00000429738 310 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 AL121772.3-201ENST00000610840 674 ntBASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 METTL23-215ENST00000615984 1171 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 C6orf203-202ENST00000405204 1420 ntAPPRIS P1 TSL 2 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 ETV7-202ENST00000340181 1719 ntAPPRIS P3 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 KCNN4-201ENST00000262888 2240 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 E2F1-201ENST00000343380 2503 ntAPPRIS P1 TSL 1 (best) BASIC19.47■□□□□ 0.71
SLC44A3Q8N4M1 KCNJ12-202ENST00000583088 5425 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 HSD17B1-202ENST00000585807 4982 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 TMEM91-209ENST00000539627 1843 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 CHMP4A-201ENST00000347519 1393 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 JAKMIP1-208ENST00000637373 1362 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 SPPL2B-212ENST00000618220 2459 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 ASCL5-201ENST00000449188 2026 ntAPPRIS P1 TSL 3 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 AC004975.2-201ENST00000442017 565 ntTSL 5 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 AC113382.1-201ENST00000500267 1253 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 PNN-202ENST00000553331 656 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 CEACAM3-208ENST00000630848 1110 ntAPPRIS ALT2 TSL 5 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 AL157888.1-201ENST00000631930 593 ntBASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 KIAA0895-204ENST00000415803 2865 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 RSPO1-201ENST00000356545 2621 ntAPPRIS P1 TSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 LSM14A-202ENST00000540746 2152 ntTSL 2 BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC19.46■□□□□ 0.71
SLC44A3Q8N4M1 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A3Q8N4M1 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A3Q8N4M1 MAP3K7CL-206ENST00000399928 1904 ntAPPRIS P1 TSL 1 (best) BASIC19.45■□□□□ 0.7
SLC44A3Q8N4M1 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC19.45■□□□□ 0.7
SLC44A3Q8N4M1 AC004982.2-201ENST00000609497 1578 ntTSL 2 BASIC19.45■□□□□ 0.7
Retrieved 100 of 98,524 protein–RNA pairs in 25 ms