Protein–RNA interactions for Protein: Q8IZC6

COL27A1, Collagen alpha-1(XXVII) chain, humanhuman

Predicted RBP Predictions only

Length 1,860 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1Q8IZC6 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 AC015961.2-201ENST00000589281 701 ntTSL 3 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 AC008878.4-201ENST00000602083 293 ntTSL 5 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 DEF8-228ENST00000610455 816 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 SCAMP4-213ENST00000621748 1172 ntAPPRIS P1 TSL 5 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 Z82202.1-201ENST00000623446 1880 ntBASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 PAQR6-201ENST00000292291 1908 ntAPPRIS P3 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 CABP1-201ENST00000288616 1369 ntAPPRIS P4 TSL 1 (best) BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 ZNF655-203ENST00000357864 1370 ntTSL 2 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 AC009078.2-202ENST00000463353 338 ntBASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 ADORA1-208ENST00000618295 862 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
COL27A1Q8IZC6 NUDT10-201ENST00000356450 1917 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 GMPPA-203ENST00000358215 1823 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 DACT1-201ENST00000335867 2571 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 PKMYT1-201ENST00000262300 2171 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 SLC39A5-209ENST00000454355 1968 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 AC005906.2-207ENST00000639005 1580 ntTSL 5 BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 REM2-201ENST00000267396 1923 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 HMGN1-203ENST00000380748 829 ntTSL 3 BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 TSPY19P-201ENST00000418461 509 ntBASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 RABL2B-209ENST00000435118 1126 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 TSPY18P-201ENST00000441642 509 ntBASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 PHGR1-201ENST00000448599 436 ntAPPRIS P1 TSL 5 BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 SMN2-213ENST00000614240 804 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 RRS1-201ENST00000320270 1706 ntAPPRIS P1 BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 BOK-201ENST00000318407 2657 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 KHDC1-202ENST00000370384 1430 ntAPPRIS ALT2 TSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 MELTF-202ENST00000296351 1650 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
COL27A1Q8IZC6 HMOX2-218ENST00000619913 1908 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 PHOSPHO1-201ENST00000310544 1816 ntAPPRIS P1 TSL 2 BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 STXBP2-202ENST00000414284 1859 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 CNPY2-201ENST00000273308 1214 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 TSPY22P-201ENST00000427496 604 ntBASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 LINC01128-207ENST00000449005 874 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 LIMD2-211ENST00000583211 1298 ntTSL 3 BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 KISS1R-203ENST00000606939 964 ntTSL 5 BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 BEAN1-202ENST00000536005 1988 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 UBE2J2-201ENST00000347370 2387 ntTSL 3 BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 MAFG-AS1-201ENST00000582106 1895 ntTSL 1 (best) BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 DVL3-203ENST00000431765 2294 ntTSL 5 BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 FARSA-207ENST00000588025 2057 ntTSL 5 BASIC17.93■□□□□ 0.46
COL27A1Q8IZC6 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 MRPS15-201ENST00000373116 1006 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 TOB2P1-201ENST00000469761 992 ntBASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 ZNF436-AS1-206ENST00000518821 461 ntTSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 CARHSP1-205ENST00000562843 843 ntTSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 AC011498.5-201ENST00000592027 486 ntBASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 LITAF-220ENST00000620789 692 ntTSL 5 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 ASAH1-251ENST00000637561 929 ntTSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 MRM3-201ENST00000304478 1809 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 SPSB3-201ENST00000301717 1449 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 GRINA-201ENST00000313269 1968 ntAPPRIS P1 TSL 5 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 IKBKG-207ENST00000611071 2103 ntAPPRIS P3 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 ACBD5-201ENST00000375888 1747 ntAPPRIS ALT2 TSL 5 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 MAFG-202ENST00000392366 1743 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 GBX2-203ENST00000551105 1307 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 NUDT11-201ENST00000375992 2385 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 KIF2A-202ENST00000401507 2539 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 ABHD14B-204ENST00000461108 1397 ntTSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 LINC00094-201ENST00000432807 2300 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 BARHL1-202ENST00000542090 1197 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 CD24-206ENST00000620405 586 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 C1orf43-210ENST00000640799 1287 ntTSL 5 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 FAM189B-201ENST00000350210 2379 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 DNAAF3-207ENST00000527223 2228 ntAPPRIS ALT2 TSL 2 BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 LUC7L-201ENST00000293872 1456 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 SIN3B-209ENST00000596802 2556 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
COL27A1Q8IZC6 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 CELF6-202ENST00000395258 1741 ntTSL 5 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 DLEU7-201ENST00000400393 2092 ntAPPRIS P3 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 SUMF2-203ENST00000395435 1287 ntTSL 2 BASIC17.91■□□□□ 0.46
COL27A1Q8IZC6 GNB1L-203ENST00000405009 1076 ntTSL 1 (best) BASIC17.91■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 19 ms