Protein–RNA interactions for Protein: Q6P499

NIPAL3, NIPA-like protein 3, humanhuman

Predictions only

Length 406 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NIPAL3Q6P499 AP1AR-202ENST00000309703 2337 ntAPPRIS ALT1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 GRM2-204ENST00000442933 2064 ntTSL 5 BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 C16orf59-210ENST00000569496 1911 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 PYCR1-204ENST00000403172 1811 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 ANKMY1-209ENST00000405523 1827 ntTSL 1 (best) BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 SMC5-AS1-201ENST00000594708 1818 ntTSL 2 BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 AL031598.1-201ENST00000561511 1773 ntBASIC17.33■□□□□ 0.36
NIPAL3Q6P499 ABHD14A-ACY1-202ENST00000463937 1705 ntAPPRIS ALT2 TSL 5 BASIC17.33■□□□□ 0.36
NIPAL3Q6P499 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 ECHDC1-214ENST00000474289 2443 ntAPPRIS P3 TSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 NOL3-204ENST00000564053 1592 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 NTMT1-209ENST00000611055 1562 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 GPR20-201ENST00000377741 1515 ntAPPRIS P1 TSL 3 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 ZBTB46-203ENST00000395104 5198 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 CCDC27-201ENST00000294600 2176 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 SYT7-209ENST00000542836 1362 ntTSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 USP39-202ENST00000409025 1946 ntTSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 AC133681.1-201ENST00000465482 601 ntBASIC17.32■□□□□ 0.36
NIPAL3Q6P499 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 AC142381.4-202ENST00000563973 229 ntBASIC17.32■□□□□ 0.36
NIPAL3Q6P499 AC009090.2-201ENST00000565829 472 ntTSL 3 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 AC007493.2-201ENST00000568427 478 ntTSL 3 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 GDPD1-201ENST00000284116 1821 ntAPPRIS P1 TSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 SAMD5-201ENST00000367474 6089 ntAPPRIS P1 TSL 2 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 USP49-202ENST00000373010 2446 ntTSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 DEF8-211ENST00000563795 1767 ntTSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 ZNF419-205ENST00000424930 2323 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 CXorf49-202ENST00000535490 1715 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 CXorf49B-202ENST00000542739 1715 ntAPPRIS P1 TSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 ELOC-209ENST00000602840 2780 ntTSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 P3H1-204ENST00000397054 2705 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 ARNT-202ENST00000358595 4887 ntAPPRIS P3 TSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 CPEB2-207ENST00000507071 2103 ntAPPRIS ALT2 TSL 1 (best) BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 AC093525.10-201ENST00000625130 1569 ntBASIC17.32■□□□□ 0.36
NIPAL3Q6P499 RCAN3-205ENST00000436717 2574 ntTSL 3 BASIC17.32■□□□□ 0.36
NIPAL3Q6P499 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 PCGF6-201ENST00000337211 1950 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 LETM2-208ENST00000524874 1459 ntTSL 5 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 TMEM109-201ENST00000227525 2413 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 USP25-204ENST00000400183 5341 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 KRT8P8-201ENST00000434750 1448 ntBASIC17.31■□□□□ 0.36
NIPAL3Q6P499 ANKS3-202ENST00000446014 2265 ntTSL 5 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 RPL7-202ENST00000396465 1308 ntTSL 3 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 A3GALT2-201ENST00000442999 1023 ntAPPRIS P1 TSL 5 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 NDUFAF3-204ENST00000451378 774 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 LINC01786-202ENST00000453732 389 ntTSL 2 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 AC091564.2-201ENST00000527191 399 ntTSL 3 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 AC018445.1-201ENST00000621571 568 ntTSL 4 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 FP475955.1-201ENST00000624937 553 ntTSL 4 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 LARGE2-201ENST00000325468 2522 ntAPPRIS P3 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 TSPAN15-201ENST00000373290 1698 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 IMP3-201ENST00000314852 2028 ntAPPRIS P1 TSL 2 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 SDHAP1-207ENST00000440850 2000 ntBASIC17.31■□□□□ 0.36
NIPAL3Q6P499 ENTPD6-202ENST00000360031 2766 ntAPPRIS ALT2 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 B4GALT1-202ENST00000535206 1535 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 PAOX-201ENST00000278060 1858 ntAPPRIS P1 TSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 LONP1-215ENST00000593119 2918 ntTSL 2 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 LINC01586-201ENST00000506090 1840 ntTSL 2 BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC17.31■□□□□ 0.36
NIPAL3Q6P499 FST-201ENST00000256759 2519 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 UBTF-202ENST00000343638 4684 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 EMX2-203ENST00000553456 2897 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 GPR142-201ENST00000335666 1437 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 MAEA-208ENST00000505839 1444 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 GDF10-201ENST00000580279 2458 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 RREB1-201ENST00000334984 5789 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 EPHX1-201ENST00000272167 1660 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 AUP1-201ENST00000377526 1695 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 MGARP-201ENST00000398955 1339 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 MAPK8IP3-216ENST00000610761 5626 ntAPPRIS ALT1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 CBFA2T2-201ENST00000342704 2864 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 SPATA2L-202ENST00000335360 1001 ntTSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 AKR1A1-201ENST00000351829 1166 ntAPPRIS P1 TSL 1 (best) BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 SEC61A2-206ENST00000379051 707 ntTSL 3 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 DYNLT3-203ENST00000432389 719 ntTSL 5 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 NELFE-206ENST00000444811 1202 ntAPPRIS ALT2 TSL 2 BASIC17.3■□□□□ 0.36
NIPAL3Q6P499 AL158047.1-201ENST00000445918 881 ntBASIC17.3■□□□□ 0.36
Retrieved 100 of 98,524 protein–RNA pairs in 20.8 ms