Protein–RNA interactions for Protein: Q5T4S7

UBR4, E3 ubiquitin-protein ligase UBR4, humanhuman

Predictions only

Length 5,183 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4Q5T4S7 AC009947.1-201ENST00000444350 727 ntBASIC10.43□□□□□ -0.74
UBR4Q5T4S7 LEPROTL1-204ENST00000518192 847 ntTSL 3 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC021739.2-201ENST00000558375 964 ntTSL 5 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC007192.2-201ENST00000600364 463 ntTSL 5 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 GMPPA-213ENST00000622191 1473 ntTSL 5 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 PHKG2-202ENST00000424889 1566 ntTSL 2 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 C2orf76-202ENST00000409466 1150 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 FNDC10-201ENST00000422725 2085 ntAPPRIS P1 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 LRRC23-209ENST00000443597 1628 ntAPPRIS P4 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 RCAN1-212ENST00000492600 935 ntTSL 2 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 ACTR2-205ENST00000542850 1429 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 BCL2L12-210ENST00000611631 1259 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 CPNE9-205ENST00000613455 1742 ntTSL 5 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC018553.1-201ENST00000616682 1458 ntBASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC105339.1-201ENST00000440089 1362 ntTSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC091180.3-201ENST00000506504 963 ntTSL 3 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC046168.2-201ENST00000560590 875 ntTSL 3 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 SOX17-201ENST00000297316 2342 ntAPPRIS P1 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 WDR88-202ENST00000361680 1835 ntAPPRIS ALT2 TSL 1 (best) BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC10.43□□□□□ -0.74
UBR4Q5T4S7 AC108449.3-201ENST00000560714 585 ntTSL 3 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 AL133338.1-201ENST00000565695 1517 ntBASIC10.42□□□□□ -0.74
UBR4Q5T4S7 AMHR2-202ENST00000379791 1437 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 MEIOB-202ENST00000397344 1792 ntTSL 5 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 MIR222HG-202ENST00000602507 1758 ntTSL 5 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 SLC41A3-202ENST00000346785 1705 ntTSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 SNRPA1-201ENST00000254193 1055 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 NKAIN2-201ENST00000368416 1106 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 HIST1H2BL-201ENST00000377401 488 ntAPPRIS P1 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 DNAJB6-209ENST00000443280 1159 ntTSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 AC007406.4-201ENST00000539568 765 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 PDPK2P-202ENST00000562415 1191 ntBASIC10.42□□□□□ -0.74
UBR4Q5T4S7 LINC01956-202ENST00000584273 612 ntTSL 3 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 SPTSSB-204ENST00000617024 1292 ntBASIC10.42□□□□□ -0.74
UBR4Q5T4S7 DBNL-213ENST00000452943 1513 ntTSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 PFKFB3-201ENST00000317350 1999 ntAPPRIS ALT1 TSL 5 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 EXOSC8-202ENST00000389704 1198 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 DERL1-203ENST00000419562 918 ntTSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 RNASET2-206ENST00000476238 887 ntAPPRIS P1 TSL 5 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 AC106897.1-201ENST00000512874 394 ntTSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 AP003385.5-201ENST00000533876 555 ntTSL 4 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 PAM16-208ENST00000573553 722 ntTSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 GTF2IRD2-205ENST00000614386 578 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 AL662799.1-201ENST00000630418 496 ntTSL 5 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 BMS1P4-202ENST00000584747 1716 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 BAIAP2-203ENST00000416299 1442 ntTSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 STAP2-201ENST00000594605 1426 ntAPPRIS ALT2 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 KLC1-203ENST00000347839 2271 ntTSL 5 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 PCDHB12-203ENST00000624949 1963 ntTSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 SMIM11A-202ENST00000399295 1074 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 NDUFAF5-203ENST00000463598 991 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 RNA5SP416-201ENST00000516838 111 ntBASIC10.42□□□□□ -0.74
UBR4Q5T4S7 SMIM11B-207ENST00000624758 1074 ntAPPRIS P1 TSL 2 BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 GCH1-206ENST00000543643 1897 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 PDE9A-205ENST00000349112 1616 ntTSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 EPHX3-201ENST00000221730 1822 ntAPPRIS P1 TSL 1 (best) BASIC10.42□□□□□ -0.74
UBR4Q5T4S7 RTBDN-202ENST00000393233 1000 ntAPPRIS ALT2 TSL 3 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 HTATIP2-205ENST00000530266 713 ntTSL 3 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 AL450267.1-201ENST00000557174 520 ntTSL 5 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 PYCR1-207ENST00000577756 1144 ntTSL 2 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 CECR7-204ENST00000609932 568 ntTSL 2 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 CCL4L2-214ENST00000617416 1258 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 MSANTD1-204ENST00000510580 2039 ntTSL 5 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 ZNF524-201ENST00000301073 1102 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 B4GALNT1-213ENST00000552350 1649 ntTSL 4 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 RUFY3-203ENST00000417478 2143 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 ERCC2-205ENST00000485403 1538 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 ASRGL1-201ENST00000301776 2182 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 CDYL-203ENST00000397588 2184 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 LBX2-203ENST00000460508 1452 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 CHRNA10-204ENST00000534359 1474 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 MEAF6-205ENST00000448519 666 ntAPPRIS ALT1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 PRICKLE2-AS1-203ENST00000476308 623 ntTSL 2 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 MYD88-211ENST00000495303 976 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 GCA-201ENST00000233612 1694 ntTSL 2 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 DPH7-201ENST00000277540 1847 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 AKT1-203ENST00000407796 2710 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 CRHR1-201ENST00000293493 2621 ntTSL 5 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 PIGBOS1-201ENST00000436697 866 ntAPPRIS P2 TSL 2 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 MIR503HG-203ENST00000441492 649 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 AC092910.1-201ENST00000482027 1129 ntBASIC10.41□□□□□ -0.74
UBR4Q5T4S7 SLC8B1-206ENST00000549069 1058 ntTSL 2 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 AC114341.1-201ENST00000618070 349 ntBASIC10.41□□□□□ -0.74
UBR4Q5T4S7 ANKHD1-205ENST00000394723 2135 ntTSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 PLPP5-203ENST00000424479 2130 ntAPPRIS P1 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 OTUB1-209ENST00000538426 1729 ntAPPRIS P2 TSL 1 (best) BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 ST3GAL4-204ENST00000444328 1812 ntAPPRIS ALT1 TSL 5 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 CRHR1-203ENST00000339069 2490 ntTSL 2 BASIC10.41□□□□□ -0.74
UBR4Q5T4S7 BUB3-202ENST00000368859 667 ntTSL 3 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 HLA-DRB6-201ENST00000411500 1235 ntBASIC10.4□□□□□ -0.74
UBR4Q5T4S7 ERLEC1-203ENST00000405123 1756 ntTSL 5 BASIC10.4□□□□□ -0.74
UBR4Q5T4S7 TSEN15-203ENST00000423085 1743 ntTSL 2 BASIC10.4□□□□□ -0.74
Retrieved 100 of 98,524 protein–RNA pairs in 19.9 ms