Protein–RNA interactions for Protein: Q2Q1W2

TRIM71, E3 ubiquitin-protein ligase TRIM71, humanhuman

Known RBP Predictions only

Length 868 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM71Q2Q1W2 RYK-208ENST00000620660 2942 ntAPPRIS P3 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 DCTN3-201ENST00000259632 808 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 SLC50A1-201ENST00000303343 1137 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 ATP5J-203ENST00000400090 647 ntAPPRIS P1 TSL 2 BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 RPL26L1-205ENST00000519974 695 ntAPPRIS P1 TSL 3 BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 IGFLR1-209ENST00000592537 1195 ntAPPRIS P2 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 PCCB-216ENST00000483687 1727 ntTSL 3 BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 CNNM1-201ENST00000356713 5959 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC20.77■□□□□ 0.92
TRIM71Q2Q1W2 LTK-201ENST00000263800 3046 ntAPPRIS P4 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM71Q2Q1W2 BAZ1A-202ENST00000360310 6010 ntAPPRIS P1 TSL 1 (best) BASIC20.77■□□□□ 0.91
TRIM71Q2Q1W2 PVRIG-201ENST00000317271 1583 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 BRICD5-201ENST00000328540 1913 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 SYT5-202ENST00000537500 2612 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 CRYZL1-203ENST00000381540 1482 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 LBX2-AS1-202ENST00000603175 2083 ntBASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 TFCP2-205ENST00000549867 1727 ntTSL 5 BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 CAB39-202ENST00000409788 1626 ntAPPRIS P1 TSL 2 BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 TUBGCP3-204ENST00000464139 2461 ntTSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 S100A14-201ENST00000344616 1058 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 RPUSD3-201ENST00000383820 1225 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 WIPI2-203ENST00000401525 2112 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 IFT27-205ENST00000433985 1095 ntAPPRIS ALT1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 MCCD1P1-208ENST00000445732 328 ntBASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 TSSC2-201ENST00000450217 709 ntBASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 PGAP2-206ENST00000459679 795 ntTSL 2 BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 PRAP1-202ENST00000463201 587 ntAPPRIS ALT2 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 AC116353.4-201ENST00000507279 576 ntTSL 4 BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 AC020558.2-201ENST00000582325 795 ntTSL 3 BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 AL691432.3-201ENST00000621860 400 ntBASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 MTURN-201ENST00000324453 5937 ntAPPRIS P1 TSL 1 (best) BASIC20.76■□□□□ 0.91
TRIM71Q2Q1W2 TMSB4X-203ENST00000380636 1702 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 SLC35D3-201ENST00000331858 2359 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 SPHK1-207ENST00000590959 1851 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 LPAR2-202ENST00000542587 2546 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 DTNBP1-203ENST00000355917 1359 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 C1QTNF1-209ENST00000581774 1368 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 DBX2-201ENST00000332700 2806 ntAPPRIS P1 TSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 PLEKHG4-201ENST00000360461 6782 ntAPPRIS P3 TSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 OGG1-202ENST00000302008 2191 ntAPPRIS ALT2 TSL 5 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 ST3GAL3-219ENST00000372374 2170 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 NCF1B-201ENST00000423083 1516 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 PRELID3A-203ENST00000587735 1694 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 CHIC2-201ENST00000263921 1194 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 CENPX-201ENST00000306704 751 ntTSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 HLA-F-220ENST00000434407 884 ntBASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 ANKRD34C-AS1-201ENST00000557790 594 ntTSL 3 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 YPEL3-204ENST00000563788 730 ntAPPRIS P1 TSL 3 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 AC004771.4-201ENST00000576752 474 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 AC092329.2-201ENST00000598402 547 ntBASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 WDR6-223ENST00000627177 207 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 FENDRR-203ENST00000595886 3095 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 LGALS9C-201ENST00000328114 1730 ntAPPRIS P2 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 AC096719.1-201ENST00000510705 1874 ntTSL 5 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 DUSP1-201ENST00000239223 2019 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 MRPL3-202ENST00000425847 1457 ntTSL 2 BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.75■□□□□ 0.91
TRIM71Q2Q1W2 MYBL2-201ENST00000217026 2639 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 AL390879.2-201ENST00000424306 2222 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 PDCD2-204ENST00000453163 2657 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 KRT14-201ENST00000167586 1662 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 THEM6-201ENST00000336138 2259 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 ACAP3-201ENST00000353662 2280 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 VGF-201ENST00000249330 2575 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 C19orf35-201ENST00000342063 2574 ntAPPRIS P1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 SLC35B1-201ENST00000240333 1850 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 KLF2-201ENST00000248071 2018 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CCDC102A-201ENST00000258214 2463 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 GLB1-201ENST00000307363 2616 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 MPG-203ENST00000397817 1039 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CT47A4-201ENST00000415858 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CT47A9-201ENST00000417256 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CT47A6-201ENST00000419194 1298 ntAPPRIS P1 TSL 5 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CT47A10-201ENST00000430448 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CT47A5-201ENST00000439466 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CT47A3-201ENST00000441330 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CT47A8-201ENST00000457977 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CT47A2-201ENST00000458218 1298 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 SELENOH-204ENST00000534355 818 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 HOXB8-203ENST00000576562 743 ntAPPRIS ALT1 TSL 2 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 AL121672.3-201ENST00000608644 468 ntBASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 AL157888.1-201ENST00000631930 593 ntBASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 MANEAL-202ENST00000373045 2685 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 LRRC75A-201ENST00000409083 2656 ntAPPRIS P3 TSL 2 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 RAB34-204ENST00000395245 1766 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 CD164L2-202ENST00000374027 1457 ntAPPRIS P3 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC20.74■□□□□ 0.91
TRIM71Q2Q1W2 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 TBC1D12-201ENST00000225235 5272 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
TRIM71Q2Q1W2 FDXR-201ENST00000293195 1875 ntAPPRIS ALT1 TSL 1 (best) BASIC20.73■□□□□ 0.91
Retrieved 100 of 98,524 protein–RNA pairs in 54.9 ms