Protein–RNA interactions for Protein: Q29RF7

PDS5A, Sister chromatid cohesion protein PDS5 homolog A, humanhuman

Known RBP Predictions only

Length 1,337 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PDS5AQ29RF7 COL13A1-202ENST00000357811 2991 ntAPPRIS ALT2 TSL 5 BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 HCK-206ENST00000518730 1742 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 RAB29-205ENST00000446390 1441 ntTSL 2 BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 EML2-220ENST00000589876 2364 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 SLC16A5-202ENST00000450736 2051 ntAPPRIS P2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 MSLN-205ENST00000563941 2109 ntAPPRIS ALT2 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 RASSF1-202ENST00000357043 1864 ntAPPRIS P3 TSL 1 (best) BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 ZNF385C-201ENST00000436535 1572 ntAPPRIS P1 TSL 5 BASIC22.86■■□□□ 1.25
PDS5AQ29RF7 AC036111.1-201ENST00000533973 1582 ntBASIC22.86■■□□□ 1.25
PDS5AQ29RF7 CASTOR1-202ENST00000407689 1623 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 AL359075.1-203ENST00000462729 1002 ntBASIC22.85■■□□□ 1.25
PDS5AQ29RF7 SNX5-210ENST00000481323 562 ntTSL 3 BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 FOSL1-203ENST00000531493 1200 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 ABCD4-228ENST00000557588 763 ntTSL 3 BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 DUX4-205ENST00000570263 768 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 ZNF534-205ENST00000617900 1085 ntTSL 2 BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 DNAJB6-218ENST00000634080 1005 ntTSL 2 BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 AL109659.2-201ENST00000606809 1674 ntBASIC22.85■■□□□ 1.25
PDS5AQ29RF7 HNRNPA3-204ENST00000435711 1731 ntAPPRIS P3 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 SYT8-202ENST00000381968 1424 ntAPPRIS P2 TSL 5 BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 MAP7D1-201ENST00000316156 3456 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 C2orf54-201ENST00000307486 2017 ntAPPRIS ALT2 TSL 1 (best) BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 UBE2Q2-204ENST00000561851 1582 ntTSL 2 BASIC22.85■■□□□ 1.25
PDS5AQ29RF7 AGTRAP-201ENST00000314340 1107 ntAPPRIS P3 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 TYMSOS-201ENST00000323813 844 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 PTGDS-202ENST00000371625 807 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 GAD2-202ENST00000376248 680 ntTSL 5 BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 GGT1-205ENST00000403838 1033 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 AL671277.2-201ENST00000458060 996 ntBASIC22.84■■□□□ 1.25
PDS5AQ29RF7 AF250324.1-201ENST00000506276 703 ntTSL 3 BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 CNTD2-203ENST00000513948 787 ntAPPRIS ALT2 TSL 2 BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 AC027796.4-201ENST00000575741 874 ntTSL 5 BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 EEF2KMT-206ENST00000587133 873 ntAPPRIS ALT2 TSL 3 BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 C1QTNF8-202ENST00000621771 897 ntTSL 5 BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 IRX1P1-201ENST00000438849 1838 ntBASIC22.84■■□□□ 1.25
PDS5AQ29RF7 UBQLN4P1-201ENST00000461599 1801 ntBASIC22.84■■□□□ 1.25
PDS5AQ29RF7 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 HPS6-201ENST00000299238 2649 ntAPPRIS P1 BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 ICA1-208ENST00000407906 1615 ntTSL 1 (best) BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 BLACE-201ENST00000378120 2456 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC22.84■■□□□ 1.25
PDS5AQ29RF7 CYB561D2-201ENST00000232508 1225 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 CHTOP-202ENST00000368687 1094 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 MALL-203ENST00000427178 1070 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 HCK-207ENST00000520553 2101 ntAPPRIS ALT2 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 MOK-234ENST00000524370 1165 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 AC011773.3-202ENST00000549291 790 ntTSL 3 BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 AC064834.1-201ENST00000606986 503 ntTSL 3 BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 AC091076.1-201ENST00000610741 619 ntBASIC22.83■■□□□ 1.25
PDS5AQ29RF7 TMEM114-203ENST00000620492 945 ntAPPRIS P1 TSL 2 BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 HYMAI.1-201ENST00000620949 238 ntBASIC22.83■■□□□ 1.25
PDS5AQ29RF7 ILKAP-212ENST00000622223 1088 ntTSL 1 (best) BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 INPPL1-201ENST00000298229 4733 ntAPPRIS P1 TSL 1 (best) BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 NDUFA10-203ENST00000404554 1557 ntTSL 5 BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 MAGED2-213ENST00000627068 1811 ntAPPRIS ALT2 TSL 5 BASIC22.83■■□□□ 1.25
PDS5AQ29RF7 AL512353.2-201ENST00000448759 1962 ntBASIC22.83■■□□□ 1.25
PDS5AQ29RF7 TPBGL-201ENST00000562197 2793 ntAPPRIS P1 BASIC22.83■■□□□ 1.24
PDS5AQ29RF7 PBXIP1-201ENST00000368460 1175 ntAPPRIS ALT2 TSL 3 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 ISOC2-202ENST00000425675 998 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 AL162457.2-201ENST00000447909 937 ntTSL 3 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 AL136307.1-201ENST00000454882 411 ntTSL 2 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 SSSCA1-206ENST00000531405 879 ntTSL 2 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 AC239803.1-201ENST00000594189 1278 ntTSL 5 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 DBP-204ENST00000599385 709 ntTSL 3 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 ARID3C-201ENST00000378909 1411 ntAPPRIS P1 TSL 2 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 KATNBL1P6-202ENST00000562413 1466 ntBASIC22.82■■□□□ 1.24
PDS5AQ29RF7 FP475955.4-201ENST00000623131 1990 ntBASIC22.82■■□□□ 1.24
PDS5AQ29RF7 PDZD7-201ENST00000370215 2032 ntTSL 2 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 GPR31-201ENST00000366834 2059 ntAPPRIS P1 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 NRG2-204ENST00000358522 2559 ntAPPRIS P5 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 NARS2-201ENST00000281038 2519 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 AL158211.5-201ENST00000623583 2518 ntBASIC22.82■■□□□ 1.24
PDS5AQ29RF7 UTP4-201ENST00000314423 2322 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 NAB2-202ENST00000342556 2318 ntTSL 5 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 MMP11-201ENST00000215743 2291 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 ACBD4-204ENST00000431281 2026 ntTSL 5 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 CORO1B-201ENST00000341356 1881 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 TMEM176A-210ENST00000484928 1530 ntAPPRIS P2 TSL 5 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 NUDT16L1-201ENST00000304301 1349 ntAPPRIS P1 TSL 1 (best) BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 BET1L-202ENST00000332865 533 ntTSL 5 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 DDRGK1-202ENST00000380201 1128 ntTSL 2 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 SPDYE15P-201ENST00000424157 909 ntBASIC22.82■■□□□ 1.24
PDS5AQ29RF7 DAP-202ENST00000432074 1048 ntTSL 2 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 FAM86EP-206ENST00000510506 987 ntBASIC22.82■■□□□ 1.24
PDS5AQ29RF7 RPARP-AS1-206ENST00000596366 631 ntTSL 3 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 RABAC1-210ENST00000601891 628 ntTSL 3 BASIC22.82■■□□□ 1.24
PDS5AQ29RF7 CLN5-201ENST00000377453 2629 ntAPPRIS ALT2 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDS5AQ29RF7 MARK3-206ENST00000440884 2643 ntTSL 1 (best) BASIC22.81■■□□□ 1.24
PDS5AQ29RF7 MATR3-206ENST00000503811 2518 ntTSL 2 BASIC22.81■■□□□ 1.24
PDS5AQ29RF7 C19orf25-202ENST00000436106 2403 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
PDS5AQ29RF7 PRMT8-202ENST00000382622 2366 ntAPPRIS P1 TSL 1 (best) BASIC22.81■■□□□ 1.24
Retrieved 100 of 98,524 protein–RNA pairs in 21.7 ms