Protein–RNA interactions for Protein: Q15878

CACNA1E, Voltage-dependent R-type calcium channel subunit alpha-1E, humanhuman

Predictions only

Length 2,313 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CACNA1EQ15878 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA1EQ15878 LINC01770-202ENST00000430109 510 ntTSL 3 BASIC18.52■□□□□ 0.56
CACNA1EQ15878 ZNF554-204ENST00000591265 1148 ntTSL 5 BASIC18.52■□□□□ 0.56
CACNA1EQ15878 AC011498.5-201ENST00000592027 486 ntBASIC18.52■□□□□ 0.56
CACNA1EQ15878 ZNF549-203ENST00000594943 556 ntTSL 4 BASIC18.52■□□□□ 0.56
CACNA1EQ15878 RAB5C-202ENST00000393860 1912 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA1EQ15878 RPS6KB1-204ENST00000443572 1913 ntTSL 2 BASIC18.52■□□□□ 0.56
CACNA1EQ15878 AC099778.1-201ENST00000568593 1911 ntBASIC18.52■□□□□ 0.56
CACNA1EQ15878 ADAD1-202ENST00000388724 1912 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA1EQ15878 MXRA8-201ENST00000309212 2273 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA1EQ15878 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.52■□□□□ 0.56
CACNA1EQ15878 RAB24-204ENST00000393611 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA1EQ15878 TSPY22P-201ENST00000427496 604 ntBASIC18.52■□□□□ 0.56
CACNA1EQ15878 SPAG16-207ENST00000432529 1250 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA1EQ15878 AC079781.3-201ENST00000449110 356 ntBASIC18.52■□□□□ 0.56
CACNA1EQ15878 MIR2117HG-201ENST00000588060 506 ntTSL 4 BASIC18.52■□□□□ 0.56
CACNA1EQ15878 WNT7B-204ENST00000410089 2202 ntTSL 5 BASIC18.52■□□□□ 0.56
CACNA1EQ15878 B3GALNT2-201ENST00000313984 1874 ntTSL 1 (best) BASIC18.52■□□□□ 0.56
CACNA1EQ15878 AC002310.5-201ENST00000569360 1515 ntAPPRIS P1 TSL 2 BASIC18.52■□□□□ 0.56
CACNA1EQ15878 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC18.52■□□□□ 0.55
CACNA1EQ15878 OSBPL10-204ENST00000438237 2624 ntAPPRIS ALT2 TSL 2 BASIC18.52■□□□□ 0.55
CACNA1EQ15878 CLEC4G-201ENST00000328853 1360 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 BDKRB1-202ENST00000553356 1526 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 GAS7-210ENST00000579158 1528 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 ATP6V0C-201ENST00000330398 1175 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 GGT1-204ENST00000401885 968 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 NTMT1-205ENST00000459968 1123 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 CMPK1-205ENST00000471289 816 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 NTMT1-207ENST00000482347 1072 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 C12orf43-206ENST00000537817 1270 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 MIR3180-5-201ENST00000583743 153 ntBASIC18.51■□□□□ 0.55
CACNA1EQ15878 AL136038.4-201ENST00000603606 1261 ntBASIC18.51■□□□□ 0.55
CACNA1EQ15878 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 METTL1-202ENST00000324871 2066 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 GAS2L1P1-201ENST00000420145 1480 ntBASIC18.51■□□□□ 0.55
CACNA1EQ15878 CPNE7-202ENST00000319518 2409 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 DBNL-219ENST00000490734 2004 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 KLHL21-206ENST00000610898 1945 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 AL137060.1-201ENST00000618151 2648 ntBASIC18.51■□□□□ 0.55
CACNA1EQ15878 PTPRJ-201ENST00000418331 5122 ntAPPRIS P2 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 LINC02247-201ENST00000417135 743 ntTSL 3 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 TSPY19P-201ENST00000418461 509 ntBASIC18.51■□□□□ 0.55
CACNA1EQ15878 TSPY18P-201ENST00000441642 509 ntBASIC18.51■□□□□ 0.55
CACNA1EQ15878 TRPC2-202ENST00000526541 1189 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 KRT8P26-201ENST00000534154 1276 ntBASIC18.51■□□□□ 0.55
CACNA1EQ15878 NAA38-203ENST00000575071 553 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 ANKRD29-202ENST00000585908 846 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 L34079.3-201ENST00000600242 546 ntTSL 4 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 AC243773.1-201ENST00000614759 544 ntTSL 5 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 WNT5B-203ENST00000537031 1437 ntAPPRIS P1 TSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 PAIP1-203ENST00000436644 1734 ntAPPRIS ALT1 TSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 SHBG-201ENST00000340624 1311 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
CACNA1EQ15878 FAM87B-201ENST00000326734 1947 ntTSL 2 BASIC18.51■□□□□ 0.55
CACNA1EQ15878 AGO3-202ENST00000324350 1726 ntTSL 2 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNA1EQ15878 PHPT1-202ENST00000371661 985 ntTSL 5 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 C7orf50-203ENST00000397100 1264 ntAPPRIS P2 TSL 3 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 AL023284.2-201ENST00000405850 579 ntBASIC18.5■□□□□ 0.55
CACNA1EQ15878 AC069368.1-202ENST00000437723 750 ntAPPRIS P1 TSL 5 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 MIR130B-201ENST00000498589 1093 ntTSL 5 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 KLK12-205ENST00000529888 735 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNA1EQ15878 MIR3917-201ENST00000580971 93 ntBASIC18.5■□□□□ 0.55
CACNA1EQ15878 AC024243.1-201ENST00000609234 778 ntBASIC18.5■□□□□ 0.55
CACNA1EQ15878 LINC00454-206ENST00000609861 841 ntTSL 5 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 TREX2-203ENST00000338525 2116 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNA1EQ15878 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNA1EQ15878 GLYCTK-201ENST00000305690 1371 ntTSL 5 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 DOC2A-201ENST00000350119 2071 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNA1EQ15878 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.5■□□□□ 0.55
CACNA1EQ15878 CSPG5-201ENST00000264723 4080 ntAPPRIS P3 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNA1EQ15878 DYRK3-202ENST00000367108 2218 ntTSL 1 (best) BASIC18.5■□□□□ 0.55
CACNA1EQ15878 KRT13-202ENST00000336861 1673 ntAPPRIS ALT2 TSL 1 (best) BASIC18.5■□□□□ 0.55
CACNA1EQ15878 DNAJC1-202ENST00000376980 2106 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 C21orf91-203ENST00000400559 1593 ntAPPRIS ALT1 TSL 5 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 MAPK15-201ENST00000338033 1961 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 CA9-201ENST00000378357 1618 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 MTMR14-201ENST00000296003 2494 ntAPPRIS P4 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 GNGT2-201ENST00000300406 889 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 TMEM89-201ENST00000330862 662 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 CYCS-202ENST00000409409 974 ntAPPRIS P1 TSL 3 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 MTG1-205ENST00000477902 1283 ntTSL 3 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 CIB2-208ENST00000560618 804 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 AC104532.1-201ENST00000588891 580 ntAPPRIS P1 TSL 4 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 AP002414.4-201ENST00000589764 1148 ntBASIC18.49■□□□□ 0.55
CACNA1EQ15878 AL513523.2-201ENST00000633218 660 ntTSL 3 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 PPP5C-202ENST00000391919 1929 ntTSL 5 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 STEAP1B-201ENST00000404369 1515 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 IRGQ-205ENST00000602269 2210 ntAPPRIS P1 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 B4GALT2-201ENST00000309519 2004 ntTSL 2 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 DEDD2-204ENST00000595337 1894 ntAPPRIS P3 TSL 3 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 SRSF11-203ENST00000370951 2385 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 APBB1-207ENST00000529519 1442 ntTSL 5 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 TCF3P1-201ENST00000423021 1937 ntBASIC18.49■□□□□ 0.55
CACNA1EQ15878 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC18.49■□□□□ 0.55
CACNA1EQ15878 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC18.49■□□□□ 0.55
CACNA1EQ15878 USP39-204ENST00000409766 2033 ntTSL 2 BASIC18.49■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 23.9 ms