Protein–RNA interactions for Protein: P98160

HSPG2, Basement membrane-specific heparan sulfate proteoglycan core protein, humanhuman

Predictions only

Length 4,391 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2P98160 MED15P5-201ENST00000423150 992 ntBASIC11.81□□□□□ -0.52
HSPG2P98160 TSPY3-202ENST00000440483 414 ntTSL 5 BASIC11.81□□□□□ -0.52
HSPG2P98160 MFGE8-203ENST00000542878 1172 ntTSL 2 BASIC11.81□□□□□ -0.52
HSPG2P98160 GSTZ1-218ENST00000557053 580 ntTSL 3 BASIC11.81□□□□□ -0.52
HSPG2P98160 SCN5A-214ENST00000612060 714 ntTSL 5 BASIC11.81□□□□□ -0.52
HSPG2P98160 PFKFB3-202ENST00000360521 1964 ntAPPRIS P2 TSL 5 BASIC11.81□□□□□ -0.52
HSPG2P98160 RGMA-208ENST00000556658 1889 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 DNAJC8-201ENST00000263697 1759 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 PTH1R-201ENST00000313049 2123 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 AC211486.1-202ENST00000416371 468 ntBASIC11.81□□□□□ -0.52
HSPG2P98160 AC211476.1-201ENST00000503899 468 ntBASIC11.81□□□□□ -0.52
HSPG2P98160 UBE2Q2P1-205ENST00000559871 534 ntTSL 5 BASIC11.81□□□□□ -0.52
HSPG2P98160 AC018558.2-201ENST00000566562 480 ntTSL 3 BASIC11.81□□□□□ -0.52
HSPG2P98160 SPON2-201ENST00000290902 1869 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 MRPS5-201ENST00000272418 1652 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 LHX2-201ENST00000373615 2554 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 LBX1-AS1-204ENST00000456391 421 ntTSL 5 BASIC11.81□□□□□ -0.52
HSPG2P98160 AL591684.3-201ENST00000605187 298 ntBASIC11.81□□□□□ -0.52
HSPG2P98160 PANK2-201ENST00000316562 2280 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 FCER2-201ENST00000346664 1596 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 FCER2-205ENST00000597921 1560 ntAPPRIS P2 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 RMND5B-201ENST00000313386 1929 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 AC121338.2-201ENST00000622535 1744 ntBASIC11.81□□□□□ -0.52
HSPG2P98160 ZNF593-201ENST00000270812 698 ntTSL 2 BASIC11.81□□□□□ -0.52
HSPG2P98160 GUK1-202ENST00000366716 940 ntAPPRIS P3 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 LMCD1-AS1-204ENST00000446281 932 ntTSL 5 BASIC11.81□□□□□ -0.52
HSPG2P98160 MCCC2-209ENST00000629193 1128 ntTSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 LINC01714-202ENST00000635451 896 ntTSL 5 BASIC11.81□□□□□ -0.52
HSPG2P98160 STXBP6-203ENST00000419632 1970 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 SLC35A3-222ENST00000640715 1989 ntTSL 5 BASIC11.81□□□□□ -0.52
HSPG2P98160 SLC7A10-201ENST00000253188 1946 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 CYP2A7-202ENST00000301146 2281 ntAPPRIS P1 TSL 1 (best) BASIC11.81□□□□□ -0.52
HSPG2P98160 CPEB1-AS1-201ENST00000560650 2138 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 KLC1-205ENST00000380038 2322 ntTSL 2 BASIC11.8□□□□□ -0.52
HSPG2P98160 TOR3A-201ENST00000352445 1182 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 ZGLP1-201ENST00000403352 1028 ntAPPRIS ALT2 TSL 5 BASIC11.8□□□□□ -0.52
HSPG2P98160 KRT18P3-201ENST00000451602 1288 ntBASIC11.8□□□□□ -0.52
HSPG2P98160 AC092718.3-202ENST00000564536 1032 ntAPPRIS P5 TSL 5 BASIC11.8□□□□□ -0.52
HSPG2P98160 AC005336.2-201ENST00000593183 939 ntBASIC11.8□□□□□ -0.52
HSPG2P98160 PAQR6-212ENST00000540423 1729 ntTSL 3 BASIC11.8□□□□□ -0.52
HSPG2P98160 SMN1-204ENST00000506163 1445 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 ISYNA1-206ENST00000578963 1691 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 FDXR-202ENST00000413947 1809 ntTSL 2 BASIC11.8□□□□□ -0.52
HSPG2P98160 NDUFAF6-203ENST00000396124 1798 ntAPPRIS P1 TSL 2 BASIC11.8□□□□□ -0.52
HSPG2P98160 GSTO1-202ENST00000369713 972 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 AF186996.4-201ENST00000467186 377 ntBASIC11.8□□□□□ -0.52
HSPG2P98160 HFE-210ENST00000470149 1123 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 AC112482.1-201ENST00000492080 688 ntBASIC11.8□□□□□ -0.52
HSPG2P98160 MIR5100-201ENST00000579544 119 ntBASIC11.8□□□□□ -0.52
HSPG2P98160 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC11.8□□□□□ -0.52
HSPG2P98160 DTNB-211ENST00000407661 2420 ntAPPRIS ALT1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 DHDH-204ENST00000523250 634 ntTSL 5 BASIC11.8□□□□□ -0.52
HSPG2P98160 PAX9-204ENST00000554201 1289 ntTSL 2 BASIC11.8□□□□□ -0.52
HSPG2P98160 CCL3-204ENST00000613922 778 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 ERF-202ENST00000440177 2032 ntTSL 2 BASIC11.8□□□□□ -0.52
HSPG2P98160 LAT-204ENST00000395461 1448 ntAPPRIS ALT2 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 GUSBP5-202ENST00000510805 1989 ntBASIC11.8□□□□□ -0.52
HSPG2P98160 BANP-217ENST00000479780 1551 ntTSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 RITA1-201ENST00000548278 2053 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 EFCAB11-202ENST00000538485 1870 ntTSL 2 BASIC11.8□□□□□ -0.52
HSPG2P98160 RASGEF1C-201ENST00000361132 2243 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 CERS1-205ENST00000623927 2558 ntAPPRIS P1 TSL 1 (best) BASIC11.8□□□□□ -0.52
HSPG2P98160 FIZ1-201ENST00000221665 2660 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 RRAS-201ENST00000246792 1044 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 CIB3-201ENST00000269878 711 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 MYCNOS-201ENST00000419083 770 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 AC096582.2-201ENST00000510860 516 ntBASIC11.79□□□□□ -0.52
HSPG2P98160 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 DLEU2-208ENST00000621282 3068 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 AC244015.2-201ENST00000616358 1861 ntBASIC11.79□□□□□ -0.52
HSPG2P98160 ZNF259P1-201ENST00000407656 1365 ntBASIC11.79□□□□□ -0.52
HSPG2P98160 C8orf82-202ENST00000524821 2476 ntAPPRIS P2 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 PCMT1-205ENST00000464889 1984 ntAPPRIS P3 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 MAGIX-207ENST00000615915 1757 ntAPPRIS ALT2 TSL 2 BASIC11.79□□□□□ -0.52
HSPG2P98160 DPY30-201ENST00000295066 631 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 ANKRD37-201ENST00000335174 1141 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 DPY30-202ENST00000342166 708 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 YBX2P1-201ENST00000394192 760 ntBASIC11.79□□□□□ -0.52
HSPG2P98160 POM121L3P-201ENST00000419331 1163 ntBASIC11.79□□□□□ -0.52
HSPG2P98160 FAM107B-211ENST00000468747 2633 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 AC020934.1-201ENST00000588469 739 ntTSL 3 BASIC11.79□□□□□ -0.52
HSPG2P98160 PCDHGC4-204ENST00000618371 812 ntTSL 3 BASIC11.79□□□□□ -0.52
HSPG2P98160 PHF7-201ENST00000327906 2130 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 KCNK4-205ENST00000538767 1389 ntTSL 2 BASIC11.79□□□□□ -0.52
HSPG2P98160 COL8A2-203ENST00000481785 2036 ntTSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 GPANK1-201ENST00000375893 1598 ntAPPRIS P1 TSL 5 BASIC11.79□□□□□ -0.52
HSPG2P98160 DMRT2-203ENST00000358146 1965 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 IRX3-201ENST00000329734 2601 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 MVB12A-211ENST00000529939 1091 ntTSL 3 BASIC11.79□□□□□ -0.52
HSPG2P98160 C19orf25-204ENST00000586564 1265 ntAPPRIS P1 TSL 3 BASIC11.79□□□□□ -0.52
HSPG2P98160 AC239800.4-201ENST00000603712 296 ntBASIC11.79□□□□□ -0.52
HSPG2P98160 AC008608.2-201ENST00000606089 416 ntBASIC11.79□□□□□ -0.52
HSPG2P98160 SYCE1-203ENST00000368517 1377 ntAPPRIS P3 TSL 5 BASIC11.79□□□□□ -0.52
HSPG2P98160 IDH3G-201ENST00000217901 1485 ntAPPRIS P1 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 OGG1-201ENST00000302003 1655 ntAPPRIS P4 TSL 1 (best) BASIC11.79□□□□□ -0.52
HSPG2P98160 AC148477.3-202ENST00000376617 1766 ntTSL 2 BASIC11.79□□□□□ -0.52
HSPG2P98160 MYL6-203ENST00000536128 1221 ntTSL 2 BASIC11.79□□□□□ -0.52
HSPG2P98160 MYL6-209ENST00000548293 753 ntAPPRIS P3 TSL 2 BASIC11.79□□□□□ -0.52
Retrieved 100 of 98,524 protein–RNA pairs in 26.3 ms