Protein–RNA interactions for Protein: P56589

PEX3, Peroxisomal biogenesis factor 3, humanhuman

Predictions only

Length 373 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
PEX3P56589 UBQLN4P1-201ENST00000461599 1801 ntBASIC20.99■□□□□ 0.95
PEX3P56589 AC139491.1-201ENST00000512675 1516 ntTSL 1 (best) BASIC20.99■□□□□ 0.95
PEX3P56589 RMND5A-201ENST00000283632 6301 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 TBX21-201ENST00000177694 2572 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 CDK13-202ENST00000340829 5066 ntAPPRIS ALT1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 PCDHA4-201ENST00000378125 2328 ntTSL 5 BASIC20.98■□□□□ 0.95
PEX3P56589 TMIGD2-201ENST00000301272 1262 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 HPF1-201ENST00000393381 1230 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 CT47A1-201ENST00000433030 1288 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 MUC1-211ENST00000438413 927 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 AC108025.1-201ENST00000453678 1058 ntTSL 5 BASIC20.98■□□□□ 0.95
PEX3P56589 AC098864.1-204ENST00000513752 805 ntTSL 4 BASIC20.98■□□□□ 0.95
PEX3P56589 KCTD10-211ENST00000540411 866 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 SLC39A2-203ENST00000554422 1259 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 ARHGDIA-207ENST00000580685 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 CCDC28A-203ENST00000617445 1240 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 TSTD3-202ENST00000636394 336 ntAPPRIS ALT2 TSL 3 BASIC20.98■□□□□ 0.95
PEX3P56589 AGPAT5-201ENST00000285518 3685 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 ETV2-203ENST00000402764 1487 ntAPPRIS P3 TSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 KLHL14-201ENST00000358095 1884 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
PEX3P56589 PRMT1-201ENST00000391851 1393 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 SERPINH1-212ENST00000530284 1358 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 LINC01568-207ENST00000641790 1380 ntBASIC20.97■□□□□ 0.95
PEX3P56589 RBM45-201ENST00000286070 1785 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 FP475955.4-201ENST00000623131 1990 ntBASIC20.97■□□□□ 0.95
PEX3P56589 PCSK6-214ENST00000611716 4409 ntAPPRIS P4 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 INSM1-201ENST00000310227 2829 ntAPPRIS P1 BASIC20.97■□□□□ 0.95
PEX3P56589 ARMC6-220ENST00000546344 1814 ntTSL 2 BASIC20.97■□□□□ 0.95
PEX3P56589 CORO1A-216ENST00000570045 1622 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 BTNL9-210ENST00000515271 1444 ntTSL 2 BASIC20.97■□□□□ 0.95
PEX3P56589 UBTF-203ENST00000393606 2683 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 BST1-201ENST00000265016 1480 ntAPPRIS P2 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 HAUS4-217ENST00000555367 1454 ntTSL 5 BASIC20.97■□□□□ 0.95
PEX3P56589 FAM109B-201ENST00000321753 2335 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 TSPY14P-201ENST00000303979 915 ntBASIC20.97■□□□□ 0.95
PEX3P56589 IFI6-201ENST00000339145 822 ntAPPRIS P4 TSL 2 BASIC20.97■□□□□ 0.95
PEX3P56589 INGX-201ENST00000359239 846 ntBASIC20.97■□□□□ 0.95
PEX3P56589 CRAT-202ENST00000393384 973 ntTSL 2 BASIC20.97■□□□□ 0.95
PEX3P56589 ECEL1P3-201ENST00000427961 737 ntBASIC20.97■□□□□ 0.95
PEX3P56589 AP002433.1-201ENST00000525548 964 ntTSL 3 BASIC20.97■□□□□ 0.95
PEX3P56589 SIGLEC15-202ENST00000546268 1054 ntTSL 2 BASIC20.97■□□□□ 0.95
PEX3P56589 PRR29-205ENST00000579184 1052 ntAPPRIS ALT2 TSL 2 BASIC20.97■□□□□ 0.95
PEX3P56589 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 TH-202ENST00000333684 1535 ntTSL 1 (best) BASIC20.97■□□□□ 0.95
PEX3P56589 APBB1-210ENST00000530885 1626 ntTSL 2 BASIC20.96■□□□□ 0.95
PEX3P56589 TMEM151A-201ENST00000327259 2562 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 PPP1R12C-202ENST00000435544 2363 ntTSL 2 BASIC20.96■□□□□ 0.95
PEX3P56589 RHOBTB2-201ENST00000251822 5451 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 VAV1-210ENST00000602142 2620 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 ACBD4-215ENST00000592162 1684 ntTSL 5 BASIC20.96■□□□□ 0.95
PEX3P56589 ST3GAL4-217ENST00000534083 1919 ntAPPRIS ALT1 TSL 5 BASIC20.96■□□□□ 0.95
PEX3P56589 CRB2-202ENST00000373631 5550 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 TRMT2A-203ENST00000404751 2498 ntAPPRIS ALT2 TSL 2 BASIC20.96■□□□□ 0.95
PEX3P56589 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 ING1-202ENST00000338450 1189 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 UNC5B-AS1-201ENST00000447119 647 ntTSL 2 BASIC20.96■□□□□ 0.95
PEX3P56589 ABHD11-207ENST00000458339 890 ntTSL 3 BASIC20.96■□□□□ 0.95
PEX3P56589 EGLN1P1-201ENST00000531623 762 ntBASIC20.96■□□□□ 0.95
PEX3P56589 AL590627.2-201ENST00000637510 144 ntTSL 5 BASIC20.96■□□□□ 0.95
PEX3P56589 IP6K1-204ENST00000468463 1815 ntTSL 5 BASIC20.96■□□□□ 0.95
PEX3P56589 FER1L4-211ENST00000616283 1818 ntTSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 CUTC-202ENST00000370476 1346 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 TFDP2-202ENST00000467072 1853 ntAPPRIS P3 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 BHLHE22-201ENST00000321870 3262 ntAPPRIS P1 BASIC20.96■□□□□ 0.95
PEX3P56589 CAMKK1-202ENST00000348335 3563 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 PGS1-201ENST00000262764 2201 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 MAPK8IP1-201ENST00000241014 3050 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 GPR146-201ENST00000397095 1969 ntAPPRIS P1 TSL 1 (best) BASIC20.96■□□□□ 0.95
PEX3P56589 FAM19A4-201ENST00000295569 2292 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.95
PEX3P56589 GALE-201ENST00000374497 1488 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 FKBP8-206ENST00000596558 1756 ntAPPRIS ALT1 TSL 2 BASIC20.95■□□□□ 0.94
PEX3P56589 FAR2P2-204ENST00000424873 2070 ntTSL 2 BASIC20.95■□□□□ 0.94
PEX3P56589 MED15P9-202ENST00000427638 1841 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 SOCS2-201ENST00000340600 2761 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 TRAPPC12-202ENST00000382110 2483 ntAPPRIS P2 TSL 2 BASIC20.95■□□□□ 0.94
PEX3P56589 REEP2-202ENST00000378339 2170 ntAPPRIS ALT1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 AL161938.1-201ENST00000569833 2180 ntBASIC20.95■□□□□ 0.94
PEX3P56589 MLST8-232ENST00000569417 1870 ntAPPRIS P3 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 TIMM17B-201ENST00000376582 950 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 SLC25A1P2-201ENST00000430693 912 ntBASIC20.95■□□□□ 0.94
PEX3P56589 CA15P1-201ENST00000481698 905 ntBASIC20.95■□□□□ 0.94
PEX3P56589 EIF2AK4-209ENST00000560648 687 ntTSL 3 BASIC20.95■□□□□ 0.94
PEX3P56589 AC145285.6-201ENST00000604632 637 ntBASIC20.95■□□□□ 0.94
PEX3P56589 AC012306.2-201ENST00000609350 630 ntBASIC20.95■□□□□ 0.94
PEX3P56589 AL023803.3-201ENST00000615559 522 ntBASIC20.95■□□□□ 0.94
PEX3P56589 CYP21A2-222ENST00000435122 1914 ntTSL 2 BASIC20.95■□□□□ 0.94
PEX3P56589 STXBP2-203ENST00000441779 1914 ntTSL 2 BASIC20.95■□□□□ 0.94
PEX3P56589 STMN3-201ENST00000370053 2255 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 PFKFB3-219ENST00000640683 2311 ntTSL 5 BASIC20.95■□□□□ 0.94
PEX3P56589 C16orf70-201ENST00000219139 2865 ntAPPRIS P1 TSL 1 (best) BASIC20.95■□□□□ 0.94
PEX3P56589 ZFP64-206ENST00000371523 2234 ntTSL 2 BASIC20.94■□□□□ 0.94
PEX3P56589 KAT5-203ENST00000377046 2237 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
PEX3P56589 RPP25-201ENST00000322177 3049 ntAPPRIS P1 BASIC20.94■□□□□ 0.94
PEX3P56589 AL049812.1-201ENST00000432563 2267 ntBASIC20.94■□□□□ 0.94
PEX3P56589 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC20.94■□□□□ 0.94
Retrieved 100 of 98,524 protein–RNA pairs in 56.8 ms