Protein–RNA interactions for Protein: P56159

GFRA1, GDNF family receptor alpha-1, humanhuman

Predictions only

Length 465 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
GFRA1P56159 H1FNT-201ENST00000335017 1300 ntAPPRIS P1 BASIC17.07■□□□□ 0.32
GFRA1P56159 SLC34A3-202ENST00000538474 2162 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GFRA1P56159 SLC6A18-201ENST00000324642 2121 ntAPPRIS P1 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA1P56159 SELENOF-202ENST00000370554 1220 ntTSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA1P56159 TRPT1-202ENST00000394546 1058 ntAPPRIS ALT1 TSL 5 BASIC17.07■□□□□ 0.32
GFRA1P56159 MIR1302-2HG-202ENST00000473358 712 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA1P56159 C5orf49-202ENST00000509627 1020 ntAPPRIS ALT2 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA1P56159 PTP4A3-206ENST00000524028 963 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA1P56159 TRPT1-210ENST00000541278 941 ntTSL 2 BASIC17.07■□□□□ 0.32
GFRA1P56159 TNFAIP2-209ENST00000560869 4683 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GFRA1P56159 AC140725.1-202ENST00000561145 712 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA1P56159 AC008622.2-201ENST00000617006 1229 ntBASIC17.07■□□□□ 0.32
GFRA1P56159 AL513523.10-201ENST00000623024 1186 ntAPPRIS P1 TSL 5 BASIC17.07■□□□□ 0.32
GFRA1P56159 CEP85L-205ENST00000419517 2079 ntAPPRIS P3 TSL 1 (best) BASIC17.07■□□□□ 0.32
GFRA1P56159 EFHC1-206ENST00000635760 2030 ntTSL 5 BASIC17.07■□□□□ 0.32
GFRA1P56159 IRX1P1-201ENST00000438849 1838 ntBASIC17.07■□□□□ 0.32
GFRA1P56159 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 SNX19-209ENST00000530356 1562 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 ANXA8L1-201ENST00000584982 2174 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 TNFRSF1A-213ENST00000540022 1527 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 ACD-203ENST00000602320 1408 ntAPPRIS ALT2 TSL 5 BASIC17.06■□□□□ 0.32
GFRA1P56159 MLF2-201ENST00000203630 1969 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 FAM76B-204ENST00000536839 2546 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GFRA1P56159 METRNL-203ENST00000571814 1900 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 BCAM-201ENST00000270233 2402 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 AC116565.2-201ENST00000637674 1854 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 RTBDN-201ENST00000322912 1328 ntAPPRIS P3 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 UBQLN4P1-201ENST00000461599 1801 ntBASIC17.06■□□□□ 0.32
GFRA1P56159 GPR6-201ENST00000275169 1089 ntAPPRIS P1 BASIC17.06■□□□□ 0.32
GFRA1P56159 SCGB3A1-201ENST00000292641 521 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 AC099329.3-201ENST00000431549 602 ntAPPRIS P1 TSL 4 BASIC17.06■□□□□ 0.32
GFRA1P56159 PHB2-202ENST00000440277 996 ntTSL 5 BASIC17.06■□□□□ 0.32
GFRA1P56159 RARRES2-205ENST00000482669 563 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 NDUFB10-202ENST00000543683 830 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 MIR4674-201ENST00000582457 87 ntBASIC17.06■□□□□ 0.32
GFRA1P56159 AC022154.1-201ENST00000600303 766 ntTSL 3 BASIC17.06■□□□□ 0.32
GFRA1P56159 CYB561D2-210ENST00000607121 1004 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 PITPNB-211ENST00000634017 1017 ntAPPRIS ALT1 TSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 AC009542.2-201ENST00000637483 1189 ntTSL 5 BASIC17.06■□□□□ 0.32
GFRA1P56159 ISOC2-201ENST00000085068 1122 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 ZNF664-207ENST00000539644 5108 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 ANXA8-208ENST00000611843 2174 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 CHMP6-201ENST00000325167 1664 ntAPPRIS P1 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 VWA8-AS1-201ENST00000611103 2079 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 SLC23A3-201ENST00000295738 2037 ntTSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 SIX5-203ENST00000560168 1975 ntTSL 4 BASIC17.06■□□□□ 0.32
GFRA1P56159 RASGRP1-201ENST00000310803 5023 ntAPPRIS P2 TSL 1 (best) BASIC17.06■□□□□ 0.32
GFRA1P56159 RASGRP1-204ENST00000539159 5021 ntAPPRIS ALT1 TSL 5 BASIC17.06■□□□□ 0.32
GFRA1P56159 SNHG10-201ENST00000500370 1531 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 NRP2-206ENST00000417189 2386 ntTSL 2 BASIC17.06■□□□□ 0.32
GFRA1P56159 PCSK6-217ENST00000618548 4269 ntAPPRIS ALT2 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 PFKFB3-204ENST00000379785 2181 ntTSL 5 BASIC17.05■□□□□ 0.32
GFRA1P56159 RNF165-205ENST00000588679 2904 ntBASIC17.05■□□□□ 0.32
GFRA1P56159 GSTM4-201ENST00000326729 1321 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 CAB39-203ENST00000410084 1324 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 MUS81-201ENST00000308110 2392 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 UBL4A-202ENST00000369660 2382 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 S100A16-203ENST00000368705 956 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 FAHD2CP-202ENST00000443258 893 ntTSL 3 BASIC17.05■□□□□ 0.32
GFRA1P56159 BX664615.1-201ENST00000443558 458 ntBASIC17.05■□□□□ 0.32
GFRA1P56159 TMEM64-204ENST00000519519 873 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 GJA4-201ENST00000342280 1622 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 NES-201ENST00000368223 5558 ntAPPRIS P1 TSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 FP475955.4-201ENST00000623131 1990 ntBASIC17.05■□□□□ 0.32
GFRA1P56159 PRKAG2-203ENST00000418337 2318 ntTSL 1 (best) BASIC17.05■□□□□ 0.32
GFRA1P56159 TCP11-209ENST00000444780 1841 ntAPPRIS ALT2 TSL 2 BASIC17.05■□□□□ 0.32
GFRA1P56159 GGT6-202ENST00000381550 2145 ntTSL 2 BASIC17.05■□□□□ 0.32
GFRA1P56159 KRT8P45-201ENST00000414328 1447 ntBASIC17.04■□□□□ 0.32
GFRA1P56159 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 FXR2-201ENST00000250113 2957 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 P3H4-202ENST00000393928 2601 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 LRRC14-201ENST00000292524 5328 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 CFAP100-203ENST00000505024 1994 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 WNT7B-202ENST00000409496 2285 ntAPPRIS ALT1 TSL 2 BASIC17.04■□□□□ 0.32
GFRA1P56159 TPCN2-208ENST00000637342 2856 ntTSL 5 BASIC17.04■□□□□ 0.32
GFRA1P56159 EEF1A1-203ENST00000331523 1923 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GFRA1P56159 AQP11-201ENST00000313578 2152 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 MYBL2-202ENST00000396863 2704 ntTSL 2 BASIC17.04■□□□□ 0.32
GFRA1P56159 PPP1R7-207ENST00000407025 1592 ntAPPRIS P1 TSL 5 BASIC17.04■□□□□ 0.32
GFRA1P56159 DGCR6L-201ENST00000248879 1154 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 CFL1-201ENST00000308162 1234 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 FAM212A-201ENST00000333323 1040 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 CTBP2-202ENST00000334808 2130 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 GLRX2-201ENST00000367439 701 ntAPPRIS ALT2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 MIR1224-201ENST00000408193 85 ntBASIC17.04■□□□□ 0.32
GFRA1P56159 LINC01381-201ENST00000431650 466 ntTSL 3 BASIC17.04■□□□□ 0.32
GFRA1P56159 AC104076.2-201ENST00000448912 469 ntBASIC17.04■□□□□ 0.32
GFRA1P56159 AC079385.1-202ENST00000549203 569 ntTSL 4 BASIC17.04■□□□□ 0.32
GFRA1P56159 TXNL4A-211ENST00000592837 611 ntTSL 2 BASIC17.04■□□□□ 0.32
GFRA1P56159 AC006011.2-201ENST00000621313 1158 ntBASIC17.04■□□□□ 0.32
GFRA1P56159 TRAPPC6A-201ENST00000006275 805 ntTSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 AC141257.4-201ENST00000634557 245 ntBASIC17.04■□□□□ 0.32
GFRA1P56159 AC136944.6-201ENST00000634818 245 ntBASIC17.04■□□□□ 0.32
GFRA1P56159 C14orf79-202ENST00000547315 2370 ntAPPRIS P2 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 MOGS-201ENST00000233616 2895 ntAPPRIS P3 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 SLC35A3-224ENST00000640732 1777 ntTSL 5 BASIC17.04■□□□□ 0.32
GFRA1P56159 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC17.04■□□□□ 0.32
GFRA1P56159 CDC14B-208ENST00000463569 1734 ntAPPRIS ALT2 TSL 5 BASIC17.04■□□□□ 0.32
Retrieved 100 of 98,524 protein–RNA pairs in 34.4 ms