Protein–RNA interactions for Protein: P53007

SLC25A1, Tricarboxylate transport protein, mitochondrial, humanhuman

Predictions only

Length 311 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC25A1P53007 LINC01578-208ENST00000557147 490 ntTSL 3 BASIC16.93■□□□□ 0.3
SLC25A1P53007 PRR14-202ENST00000300835 2198 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC25A1P53007 ANKRD29-201ENST00000322980 1658 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC25A1P53007 GTF2H4-202ENST00000376316 1673 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC25A1P53007 UNC5D-204ENST00000420357 2966 ntTSL 5 BASIC16.93■□□□□ 0.3
SLC25A1P53007 CASR-204ENST00000638421 5088 ntAPPRIS P1 TSL 5 BASIC16.93■□□□□ 0.3
SLC25A1P53007 TAF6-211ENST00000453269 2464 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC25A1P53007 NFATC1-217ENST00000591814 4819 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC25A1P53007 MFSD1-201ENST00000264266 1594 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC25A1P53007 RNASEH2C-203ENST00000528220 1337 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC25A1P53007 CHRND-201ENST00000258385 2112 ntAPPRIS P1 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC25A1P53007 ARRB1-201ENST00000360025 1895 ntAPPRIS P3 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC25A1P53007 AC010173.1-201ENST00000549023 1453 ntTSL 2 BASIC16.93■□□□□ 0.3
SLC25A1P53007 EPB41L4B-201ENST00000374557 4006 ntAPPRIS ALT2 TSL 1 (best) BASIC16.93■□□□□ 0.3
SLC25A1P53007 MLX-201ENST00000246912 2586 ntAPPRIS P3 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 NKX2-1-203ENST00000518149 2583 ntAPPRIS P1 TSL 5 BASIC16.92■□□□□ 0.3
SLC25A1P53007 DENND1A-203ENST00000373624 5010 ntAPPRIS P4 TSL 5 BASIC16.92■□□□□ 0.3
SLC25A1P53007 STX5-202ENST00000377897 1785 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 CNTNAP3B-203ENST00000377561 5379 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 NPLOC4-201ENST00000331134 4415 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 ACADS-201ENST00000242592 1950 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 CLTA-202ENST00000345519 1073 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 RTL8A-201ENST00000370775 1244 ntAPPRIS P1 BASIC16.92■□□□□ 0.3
SLC25A1P53007 Z98884.1-201ENST00000451646 830 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC25A1P53007 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC25A1P53007 KCNMA1-220ENST00000481070 896 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC25A1P53007 AC108693.2-201ENST00000492981 303 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC25A1P53007 BAALC-AS1-206ENST00000521383 736 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC25A1P53007 AC022211.2-202ENST00000582668 546 ntTSL 4 BASIC16.92■□□□□ 0.3
SLC25A1P53007 MTDHP1-201ENST00000605323 784 ntBASIC16.92■□□□□ 0.3
SLC25A1P53007 FCMR-202ENST00000442471 1441 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC25A1P53007 TWF2-203ENST00000499914 1440 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC25A1P53007 PLPPR2-208ENST00000591608 2552 ntAPPRIS ALT2 TSL 2 BASIC16.92■□□□□ 0.3
SLC25A1P53007 RGS3-231ENST00000613049 1726 ntTSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 WDTC1-201ENST00000319394 4819 ntAPPRIS ALT1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC16.92■□□□□ 0.3
SLC25A1P53007 LRRC23-201ENST00000007969 1615 ntAPPRIS P4 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 EFTUD1P1-204ENST00000560401 1798 ntBASIC16.92■□□□□ 0.3
SLC25A1P53007 LIN28B-AS1-203ENST00000636682 1797 ntTSL 3 BASIC16.92■□□□□ 0.3
SLC25A1P53007 COBL-210ENST00000632460 1941 ntTSL 5 BASIC16.92■□□□□ 0.3
SLC25A1P53007 PCSK7-201ENST00000320934 4649 ntAPPRIS P1 TSL 1 (best) BASIC16.92■□□□□ 0.3
SLC25A1P53007 MEN1-205ENST00000377316 2868 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 DIO1-201ENST00000322679 1658 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 DIO1-217ENST00000617230 1656 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 KRT8P41-201ENST00000533985 1514 ntBASIC16.91■□□□□ 0.3
SLC25A1P53007 ZHX3-212ENST00000558993 1528 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 SYT3-206ENST00000600079 2463 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 HYOU1-212ENST00000532519 2162 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 NFATC4-228ENST00000556759 2025 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 PRR23B-201ENST00000329447 1896 ntAPPRIS P1 BASIC16.91■□□□□ 0.3
SLC25A1P53007 TCP11-204ENST00000373979 1882 ntAPPRIS P3 TSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 GPT-202ENST00000394955 1885 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 PDE8A-202ENST00000339708 2663 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 ADAMTS19-201ENST00000274487 5234 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 CLASRP-201ENST00000221455 2234 ntAPPRIS P2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 MEA1-201ENST00000244711 1089 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 NXNL2-201ENST00000375854 805 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 GAS7-202ENST00000396115 929 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 LINC00708-201ENST00000428165 916 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC16.91■□□□□ 0.3
SLC25A1P53007 GLRB-205ENST00000512619 728 ntTSL 3 BASIC16.91■□□□□ 0.3
SLC25A1P53007 MAGIX-206ENST00000615626 1057 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 NFATC1-201ENST00000253506 4642 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 ZNF302-214ENST00000613363 2893 ntAPPRIS ALT2 TSL 4 BASIC16.91■□□□□ 0.3
SLC25A1P53007 MYO9A-214ENST00000566885 5111 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 CLN8-211ENST00000636934 1790 ntTSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 RABL2B-205ENST00000395595 2428 ntAPPRIS ALT2 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 PRMT5-204ENST00000397441 2418 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC25A1P53007 MAFG-201ENST00000357736 5040 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 CNOT6-201ENST00000261951 6176 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 ZNF213-202ENST00000416391 2996 ntAPPRIS P1 TSL 5 BASIC16.91■□□□□ 0.3
SLC25A1P53007 DDX31-206ENST00000480876 1333 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 CDKN2B-AS1-217ENST00000585267 1337 ntTSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 LINC00461-203ENST00000504246 2300 ntTSL 2 BASIC16.91■□□□□ 0.3
SLC25A1P53007 PCGF3-208ENST00000470161 1652 ntAPPRIS P1 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 TBC1D2B-202ENST00000409931 6086 ntAPPRIS P3 TSL 1 (best) BASIC16.91■□□□□ 0.3
SLC25A1P53007 NECAB1-201ENST00000417640 5289 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 XYLT1-201ENST00000261381 9891 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 ANXA8L1-203ENST00000613703 1874 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC25A1P53007 CCDC17-202ENST00000421127 2216 ntAPPRIS ALT2 TSL 2 BASIC16.9■□□□□ 0.3
SLC25A1P53007 SH2B1-202ENST00000337120 6043 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 TLE3-226ENST00000627388 5742 ntAPPRIS ALT1 TSL 5 BASIC16.9■□□□□ 0.3
SLC25A1P53007 NKD2-201ENST00000274150 1940 ntAPPRIS ALT2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 AHCYL1-202ENST00000369799 4015 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 COMP-202ENST00000425807 2292 ntTSL 2 BASIC16.9■□□□□ 0.3
SLC25A1P53007 FMR1-207ENST00000439526 3699 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 C16orf58-202ENST00000430477 2471 ntAPPRIS P2 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 FSTL1-201ENST00000295633 5943 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 BICD1-207ENST00000551848 1962 ntBASIC16.9■□□□□ 0.3
SLC25A1P53007 ABHD14B-202ENST00000361143 1636 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 CABP7-201ENST00000216144 3259 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 TTC9B-201ENST00000311308 843 ntAPPRIS P1 TSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 C10orf91-201ENST00000321248 1257 ntTSL 1 (best) BASIC16.9■□□□□ 0.3
SLC25A1P53007 PMF1-BGLAP-202ENST00000368276 852 ntTSL 3 BASIC16.9■□□□□ 0.3
Retrieved 100 of 98,524 protein–RNA pairs in 27.6 ms