Protein–RNA interactions for Protein: P50748

KNTC1, Kinetochore-associated protein 1, humanhuman

Predictions only

Length 2,209 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KNTC1P50748 UBE2Z-201ENST00000360943 3122 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KNTC1P50748 FAM50A-202ENST00000393600 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KNTC1P50748 APPL2-201ENST00000258530 3239 ntAPPRIS P1 TSL 1 (best) BASIC18.08■□□□□ 0.48
KNTC1P50748 PER3-203ENST00000377541 1524 ntTSL 1 (best) BASIC18.08■□□□□ 0.48
KNTC1P50748 TAX1BP3-202ENST00000611779 1302 ntTSL 2 BASIC18.08■□□□□ 0.48
KNTC1P50748 MAP2K5-202ENST00000340972 1491 ntTSL 2 BASIC18.07■□□□□ 0.48
KNTC1P50748 RASSF7-205ENST00000454668 1450 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 OGFOD2-205ENST00000454694 1488 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 CASKIN2-205ENST00000581870 1612 ntTSL 2 BASIC18.07■□□□□ 0.48
KNTC1P50748 PALM-208ENST00000592155 2272 ntTSL 4 BASIC18.07■□□□□ 0.48
KNTC1P50748 NFIB-201ENST00000380921 1274 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 UFSP1-201ENST00000388761 996 ntAPPRIS P1 BASIC18.07■□□□□ 0.48
KNTC1P50748 CAPG-203ENST00000409670 1183 ntAPPRIS P1 TSL 5 BASIC18.07■□□□□ 0.48
KNTC1P50748 AL161452.1-201ENST00000415062 1117 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 AL133343.2-201ENST00000457213 370 ntTSL 3 BASIC18.07■□□□□ 0.48
KNTC1P50748 FNDC5-205ENST00000496770 837 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 ZBED5-AS1-202ENST00000529014 771 ntTSL 5 BASIC18.07■□□□□ 0.48
KNTC1P50748 LINC02317-201ENST00000555413 426 ntTSL 3 BASIC18.07■□□□□ 0.48
KNTC1P50748 TYROBP-209ENST00000589517 415 ntAPPRIS ALT1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 ATP5D-207ENST00000591660 637 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
KNTC1P50748 GPR157-201ENST00000377411 5265 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 DGAT2-201ENST00000228027 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 TMEM62-201ENST00000260403 2771 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 NR1H2-202ENST00000411902 1466 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 GLS-201ENST00000320717 4834 ntAPPRIS P3 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 MAG-201ENST00000361922 2426 ntAPPRIS ALT2 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 STX6-204ENST00000542060 4809 ntTSL 2 BASIC18.07■□□□□ 0.48
KNTC1P50748 CHCHD1-201ENST00000372833 835 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 AC003688.1-201ENST00000577138 489 ntAPPRIS P1 TSL 3 BASIC18.07■□□□□ 0.48
KNTC1P50748 AL391807.1-203ENST00000604392 2365 ntBASIC18.07■□□□□ 0.48
KNTC1P50748 GPAT2P1-201ENST00000444924 1672 ntBASIC18.07■□□□□ 0.48
KNTC1P50748 SERPINB5-201ENST00000382771 2783 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 MYOG-201ENST00000241651 1528 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 P4HB-201ENST00000331483 2603 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 CRYBB2P1-202ENST00000382734 1364 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
KNTC1P50748 MAPK8IP3-202ENST00000356010 4456 ntTSL 5 BASIC18.07■□□□□ 0.48
KNTC1P50748 SP3-208ENST00000640958 2142 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 IL11RA-201ENST00000318041 1728 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 TANGO2-217ENST00000456048 2439 ntTSL 2 BASIC18.06■□□□□ 0.48
KNTC1P50748 KLK12-201ENST00000250351 882 ntAPPRIS P4 TSL 5 BASIC18.06■□□□□ 0.48
KNTC1P50748 PARK7-201ENST00000338639 949 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 ING5-202ENST00000406941 946 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 AC007834.1-201ENST00000446473 728 ntTSL 3 BASIC18.06■□□□□ 0.48
KNTC1P50748 PENK-208ENST00000523051 772 ntTSL 5 BASIC18.06■□□□□ 0.48
KNTC1P50748 KRT8P26-201ENST00000534154 1276 ntBASIC18.06■□□□□ 0.48
KNTC1P50748 BMF-207ENST00000559701 630 ntTSL 3 BASIC18.06■□□□□ 0.48
KNTC1P50748 AC120114.3-201ENST00000611923 658 ntBASIC18.06■□□□□ 0.48
KNTC1P50748 BEAN1-211ENST00000622872 1171 ntAPPRIS P2 TSL 5 BASIC18.06■□□□□ 0.48
KNTC1P50748 AL365255.1-201ENST00000637702 847 ntTSL 2 BASIC18.06■□□□□ 0.48
KNTC1P50748 NDUFAB1-201ENST00000007516 717 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 LETM1-201ENST00000302787 5462 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 APBB1IP-201ENST00000356785 1513 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 UCHL5-202ENST00000367449 1507 ntAPPRIS ALT1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 TSR2-201ENST00000375151 1534 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 CCDC74B-202ENST00000392984 1353 ntAPPRIS ALT2 TSL 5 BASIC18.06■□□□□ 0.48
KNTC1P50748 AP006284.1-201ENST00000527620 2210 ntTSL 2 BASIC18.06■□□□□ 0.48
KNTC1P50748 MTUS2-202ENST00000380808 1793 ntAPPRIS P3 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 KCNAB3-201ENST00000303790 2458 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 TRMT2A-204ENST00000439169 2473 ntTSL 5 BASIC18.06■□□□□ 0.48
KNTC1P50748 SOX8-201ENST00000293894 3049 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 ELANE-201ENST00000263621 920 ntAPPRIS P1 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 KCNAB2-205ENST00000378092 1202 ntAPPRIS ALT1 TSL 5 BASIC18.06■□□□□ 0.48
KNTC1P50748 MED4-202ENST00000378586 931 ntAPPRIS ALT2 TSL 2 BASIC18.06■□□□□ 0.48
KNTC1P50748 FAM239B-201ENST00000381106 1099 ntTSL 2 BASIC18.06■□□□□ 0.48
KNTC1P50748 PRSS21-202ENST00000450020 1106 ntTSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 CYP1B1-AS1-214ENST00000620177 554 ntTSL 4 BASIC18.06■□□□□ 0.48
KNTC1P50748 MAP2K3-215ENST00000627447 351 ntTSL 5 BASIC18.06■□□□□ 0.48
KNTC1P50748 FOXC1-201ENST00000380874 3926 ntAPPRIS P1 BASIC18.06■□□□□ 0.48
KNTC1P50748 DGKZ-214ENST00000527911 3337 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
KNTC1P50748 PAQR6-213ENST00000612424 2037 ntTSL 2 BASIC18.05■□□□□ 0.48
KNTC1P50748 AC026412.3-201ENST00000605200 1661 ntTSL 5 BASIC18.05■□□□□ 0.48
KNTC1P50748 SOX10-201ENST00000360880 2861 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 HLA-A-201ENST00000376802 1334 ntBASIC18.05■□□□□ 0.48
KNTC1P50748 IRF3-202ENST00000377135 1442 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 MCAT-201ENST00000290429 2056 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 SLC22A18-202ENST00000347936 1542 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 PTPRK-218ENST00000525459 1722 ntTSL 2 BASIC18.05■□□□□ 0.48
KNTC1P50748 BIN1-207ENST00000357970 2497 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 MIR4674-201ENST00000582457 87 ntBASIC18.05■□□□□ 0.48
KNTC1P50748 SPINK2-205ENST00000616980 677 ntTSL 5 BASIC18.05■□□□□ 0.48
KNTC1P50748 SPEG-225ENST00000617028 815 ntTSL 5 BASIC18.05■□□□□ 0.48
KNTC1P50748 AC008567.3-202ENST00000619671 859 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 LINC01700-201ENST00000433952 1598 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 AC016757.1-205ENST00000470346 1888 ntTSL 2 BASIC18.05■□□□□ 0.48
KNTC1P50748 KRT18P1-202ENST00000452408 1331 ntBASIC18.05■□□□□ 0.48
KNTC1P50748 PPP4C-202ENST00000561610 1333 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 RPL3-201ENST00000216146 1442 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 IFNL4-203ENST00000634680 1421 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 NEIL1-206ENST00000564784 2019 ntAPPRIS P1 TSL 2 BASIC18.05■□□□□ 0.48
KNTC1P50748 ILDR2-204ENST00000525740 2242 ntTSL 5 BASIC18.05■□□□□ 0.48
KNTC1P50748 QKI-205ENST00000392127 7911 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 ZYG11B-202ENST00000545132 2294 ntTSL 2 BASIC18.05■□□□□ 0.48
KNTC1P50748 BID-215ENST00000622694 2199 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 SLC16A3-201ENST00000392339 2074 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KNTC1P50748 SLC16A3-202ENST00000392341 2086 ntAPPRIS P1 TSL 5 BASIC18.05■□□□□ 0.48
KNTC1P50748 DLGAP4-201ENST00000339266 5016 ntAPPRIS ALT2 TSL 5 BASIC18.05■□□□□ 0.48
KNTC1P50748 AC110285.2-201ENST00000571724 1565 ntTSL 2 BASIC18.05■□□□□ 0.48
KNTC1P50748 UBE2E3-209ENST00000602710 1556 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
KNTC1P50748 ART5-201ENST00000359918 1241 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
KNTC1P50748 ZFAND2B-207ENST00000409412 569 ntTSL 2 BASIC18.04■□□□□ 0.48
Retrieved 100 of 98,524 protein–RNA pairs in 21.9 ms