Protein–RNA interactions for Protein: P43003

SLC1A3, Excitatory amino acid transporter 1, humanhuman

Predictions only

Length 542 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SLC1A3P43003 SMPD3-201ENST00000219334 5453 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC17.51■□□□□ 0.39
SLC1A3P43003 NFATC2IP-201ENST00000320805 4569 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 SEPT8-201ENST00000296873 4394 ntAPPRIS P2 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 FAM117B-201ENST00000392238 5763 ntAPPRIS P1 TSL 1 (best) BASIC17.51■□□□□ 0.39
SLC1A3P43003 TEPSIN-213ENST00000637944 1782 ntAPPRIS ALT2 TSL 5 BASIC17.51■□□□□ 0.39
SLC1A3P43003 DDAH2-211ENST00000375787 1330 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC1A3P43003 UBE2Q2-208ENST00000569423 2969 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A3P43003 RPS6KB2-201ENST00000312629 1733 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 YPEL5-205ENST00000402708 1735 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 RAPH1-211ENST00000457812 2673 ntAPPRIS ALT2 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A3P43003 OTOP2-201ENST00000331427 2147 ntAPPRIS P1 TSL 5 BASIC17.5■□□□□ 0.39
SLC1A3P43003 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 KCNQ2-201ENST00000344425 1426 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 CNNM3-202ENST00000377060 3308 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A3P43003 TTLL3-209ENST00000426895 2767 ntAPPRIS P2 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A3P43003 C6orf223-202ENST00000439969 2757 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A3P43003 MTSS1L-204ENST00000616026 2241 ntAPPRIS ALT2 TSL 5 BASIC17.5■□□□□ 0.39
SLC1A3P43003 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC17.5■□□□□ 0.39
SLC1A3P43003 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A3P43003 REEP2-201ENST00000254901 2099 ntAPPRIS P3 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 LZTS2-202ENST00000370223 2883 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 FIP1L1-203ENST00000358575 2180 ntAPPRIS P4 TSL 2 BASIC17.5■□□□□ 0.39
SLC1A3P43003 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC17.5■□□□□ 0.39
SLC1A3P43003 TTLL10-203ENST00000379290 2283 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 AC005082.1-201ENST00000413042 2259 ntBASIC17.5■□□□□ 0.39
SLC1A3P43003 ADAP1-217ENST00000611167 2118 ntTSL 5 BASIC17.5■□□□□ 0.39
SLC1A3P43003 ABHD13-201ENST00000375898 5338 ntAPPRIS P1 TSL 1 (best) BASIC17.5■□□□□ 0.39
SLC1A3P43003 SYBU-232ENST00000533171 2498 ntAPPRIS ALT2 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A3P43003 MTFR1L-202ENST00000374301 2099 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 FAM90A1-201ENST00000307435 2342 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A3P43003 AC007613.1-201ENST00000572811 2597 ntBASIC17.49■□□□□ 0.39
SLC1A3P43003 ABCG4-206ENST00000622721 2553 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 RBL2-201ENST00000262133 4906 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 GRK6-201ENST00000355472 2939 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 PSPC1-201ENST00000338910 2407 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 PPP1R3F-202ENST00000376188 2443 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A3P43003 AL161938.1-201ENST00000569833 2180 ntBASIC17.49■□□□□ 0.39
SLC1A3P43003 KCNK4-202ENST00000422670 1697 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 PPFIA1-202ENST00000389547 4133 ntAPPRIS ALT1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 MYEOV-201ENST00000308946 2287 ntAPPRIS P3 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 NUDT10-202ENST00000376006 2001 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 ACTL6B-201ENST00000160382 1537 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 UBE2F-203ENST00000409633 837 ntTSL 3 BASIC17.49■□□□□ 0.39
SLC1A3P43003 METTL5-206ENST00000409965 880 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 PHYHD1-207ENST00000421063 1182 ntTSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 MFSD4A-206ENST00000489709 1136 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A3P43003 ATP6V0E1-204ENST00000519911 718 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A3P43003 C19orf25-213ENST00000592872 1287 ntAPPRIS P1 TSL 2 BASIC17.49■□□□□ 0.39
SLC1A3P43003 AC010336.4-201ENST00000595655 438 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A3P43003 AL353593.2-202ENST00000602947 550 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC1A3P43003 KRTAP5-11-203ENST00000617152 558 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLC1A3P43003 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC17.49■□□□□ 0.39
SLC1A3P43003 TMEM191A-211ENST00000637163 1067 ntBASIC17.49■□□□□ 0.39
SLC1A3P43003 CCND3-204ENST00000414200 1724 ntTSL 2 BASIC17.49■□□□□ 0.39
SLC1A3P43003 CHPF-201ENST00000243776 3013 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 P2RY6-203ENST00000393591 1829 ntAPPRIS P1 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 MOXD1-203ENST00000392401 2191 ntTSL 4 BASIC17.49■□□□□ 0.39
SLC1A3P43003 AKAP17A-201ENST00000313871 3204 ntAPPRIS P2 TSL 1 (best) BASIC17.49■□□□□ 0.39
SLC1A3P43003 NR1H2-210ENST00000598168 1915 ntAPPRIS ALT2 TSL 5 BASIC17.49■□□□□ 0.39
SLC1A3P43003 HNRNPLL-206ENST00000410076 1687 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 FBXO28-202ENST00000424254 1334 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 PEX5L-206ENST00000465751 2147 ntAPPRIS ALT2 TSL 2 BASIC17.48■□□□□ 0.39
SLC1A3P43003 PIP4K2A-202ENST00000376573 3802 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 IGFBP4-201ENST00000269593 2200 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 FOXI1-201ENST00000306268 1990 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 TUBA3FP-202ENST00000422086 1974 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 SH3BP1-201ENST00000357436 2852 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 ADAMTS9-202ENST00000459780 2871 ntTSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 SBDS-201ENST00000246868 1631 ntAPPRIS P2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 GDF5OS-201ENST00000374375 1734 ntAPPRIS P1 TSL 2 BASIC17.48■□□□□ 0.39
SLC1A3P43003 AGAP4-201ENST00000311652 2715 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 BOLA1-203ENST00000369153 1096 ntAPPRIS P1 TSL 3 BASIC17.48■□□□□ 0.39
SLC1A3P43003 NDUFA13-203ENST00000503283 825 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A3P43003 TESC-AS1-201ENST00000547006 1053 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A3P43003 AC020922.2-201ENST00000596786 359 ntTSL 4 BASIC17.48■□□□□ 0.39
SLC1A3P43003 AL158152.2-201ENST00000602703 235 ntTSL 3 BASIC17.48■□□□□ 0.39
SLC1A3P43003 TPGS2-221ENST00000614939 1268 ntTSL 4 BASIC17.48■□□□□ 0.39
SLC1A3P43003 DOK4-218ENST00000569548 1848 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 HOXA13-201ENST00000222753 5030 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 SOX15-201ENST00000250055 1396 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 TMEM206-201ENST00000261455 2475 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 ICA1-206ENST00000402384 2458 ntAPPRIS P3 TSL 2 BASIC17.48■□□□□ 0.39
SLC1A3P43003 C1orf210-202ENST00000523677 1478 ntAPPRIS P1 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 KIF16B-206ENST00000636835 5109 ntAPPRIS ALT2 TSL 1 (best) BASIC17.48■□□□□ 0.39
SLC1A3P43003 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC17.48■□□□□ 0.39
SLC1A3P43003 GOSR2-210ENST00000576910 1891 ntAPPRIS ALT1 TSL 5 BASIC17.48■□□□□ 0.39
SLC1A3P43003 LETM1P2-201ENST00000597330 2178 ntBASIC17.47■□□□□ 0.39
SLC1A3P43003 SLC16A13-201ENST00000308027 1748 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 GABRD-205ENST00000638771 1707 ntAPPRIS ALT2 TSL 3 BASIC17.47■□□□□ 0.39
SLC1A3P43003 TXNRD3-205ENST00000640797 1824 ntAPPRIS ALT2 TSL 2 BASIC17.47■□□□□ 0.39
SLC1A3P43003 CARMIL2-201ENST00000334583 4687 ntAPPRIS P3 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 AMIGO1-202ENST00000369864 5088 ntAPPRIS P1 TSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 F8A2-201ENST00000369505 1116 ntAPPRIS P1 BASIC17.47■□□□□ 0.39
SLC1A3P43003 STK24-AS1-201ENST00000434547 1278 ntTSL 1 (best) BASIC17.47■□□□□ 0.39
SLC1A3P43003 AC137630.1-201ENST00000452042 782 ntTSL 4 BASIC17.47■□□□□ 0.39
SLC1A3P43003 PTTG1-205ENST00000520452 895 ntAPPRIS P1 TSL 3 BASIC17.47■□□□□ 0.39
Retrieved 100 of 98,524 protein–RNA pairs in 44 ms